RNA–Protein interactions for RNA: YHR115C

DMA1, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene DMA1, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DMA1YHR115C CAB1Q04430 367 aa7.88□□□□□ -1.15
DMA1YHR115C YRB30P53107 440 aaPredicted RBP7.87□□□□□ -1.15
DMA1YHR115C MLP1Q02455 1875 aaKnown RBP7.87□□□□□ -1.15
DMA1YHR115C BCK1Q01389 1478 aa7.87□□□□□ -1.15
DMA1YHR115C GUT1P32190 709 aa7.86□□□□□ -1.15
DMA1YHR115C EDS1P38073 919 aa7.86□□□□□ -1.15
DMA1YHR115C MRX12P47084 519 aa7.86□□□□□ -1.15
DMA1YHR115C PTC3P34221 468 aaKnown RBP7.85□□□□□ -1.15
DMA1YHR115C TRK1P12685 1235 aa7.84□□□□□ -1.15
DMA1YHR115C RAM2P29703 316 aa7.84□□□□□ -1.15
DMA1YHR115C VRP1P37370 817 aa7.84□□□□□ -1.15
DMA1YHR115C IOC4Q04213 475 aa7.84□□□□□ -1.15
DMA1YHR115C ITT1Q04638 464 aa7.84□□□□□ -1.15
DMA1YHR115C MIF2P35201 549 aa7.83□□□□□ -1.16
DMA1YHR115C RTR1P40084 226 aaPredicted RBP7.83□□□□□ -1.16
DMA1YHR115C MPP10P47083 593 aaKnown RBP7.83□□□□□ -1.16
DMA1YHR115C ATH1P48016 1211 aa7.83□□□□□ -1.16
DMA1YHR115C KAR2P16474 682 aaKnown RBP7.82□□□□□ -1.16
DMA1YHR115C SUI2P20459 304 aaKnown RBP7.82□□□□□ -1.16
DMA1YHR115C ARH1P48360 493 aa7.82□□□□□ -1.16
DMA1YHR115C ELP4Q02884 456 aaKnown RBP7.82□□□□□ -1.16
DMA1YHR115C YEF3P16521 1044 aaKnown RBP7.81□□□□□ -1.16
DMA1YHR115C SNF2P22082 1703 aa7.81□□□□□ -1.16
DMA1YHR115C RAD2P07276 1031 aa7.8□□□□□ -1.16
DMA1YHR115C PAP2P53632 584 aaKnown RBP7.8□□□□□ -1.16
DMA1YHR115C YFR016CP43597 1233 aaKnown RBP7.79□□□□□ -1.16
DMA1YHR115C EAF7P53911 425 aaKnown RBP7.79□□□□□ -1.16
DMA1YHR115C SOL3P38858 249 aa7.78□□□□□ -1.16
DMA1YHR115C YML133CQ03099 1374 aa7.77□□□□□ -1.17
DMA1YHR115C YLL067CQ07888 1374 aa7.77□□□□□ -1.17
DMA1YHR115C YLL066CQ99208 1374 aa7.77□□□□□ -1.17
DMA1YHR115C RIA1P53893 1110 aa7.77□□□□□ -1.17
DMA1YHR115C RCM1P53972 490 aa7.77□□□□□ -1.17
DMA1YHR115C KRE5P22023 1365 aa7.76□□□□□ -1.17
DMA1YHR115C DPS1P04802 557 aaKnown RBP7.76□□□□□ -1.17
DMA1YHR115C PDI1P17967 522 aaKnown RBP7.76□□□□□ -1.17
DMA1YHR115C MID1P41821 548 aa7.76□□□□□ -1.17
DMA1YHR115C SAP155P43612 1002 aa7.76□□□□□ -1.17
DMA1YHR115C RTF1P53064 558 aa7.76□□□□□ -1.17
DMA1YHR115C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
DMA1YHR115C AI4P03878 556 aa7.75□□□□□ -1.17
DMA1YHR115C COQ8P27697 501 aa7.75□□□□□ -1.17
DMA1YHR115C TPD3P31383 635 aa7.75□□□□□ -1.17
DMA1YHR115C BUD27P43573 796 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
DMA1YHR115C MPH3P0CE00 602 aa7.74□□□□□ -1.17
DMA1YHR115C PSK1P31374 1356 aa7.73□□□□□ -1.17
DMA1YHR115C DAL5P15365 543 aa7.73□□□□□ -1.17
DMA1YHR115C LEU2P04173 364 aaPredicted RBP7.72□□□□□ -1.17
DMA1YHR115C TAP42Q04372 366 aa7.72□□□□□ -1.17
DMA1YHR115C MAK21Q12176 1025 aaKnown RBP7.72□□□□□ -1.17
DMA1YHR115C PRD1P25375 712 aa7.71□□□□□ -1.18
DMA1YHR115C PPH3P32345 308 aa7.71□□□□□ -1.18
DMA1YHR115C IME2P32581 645 aa7.71□□□□□ -1.18
DMA1YHR115C GRX4P32642 244 aa7.71□□□□□ -1.18
DMA1YHR115C SPT23P35210 1082 aa7.71□□□□□ -1.18
DMA1YHR115C RRP46P53256 223 aaPredicted RBP7.71□□□□□ -1.18
DMA1YHR115C HAP1P0CE41 1502 aa7.71□□□□□ -1.18
DMA1YHR115C BNI1P41832 1953 aa7.7□□□□□ -1.18
DMA1YHR115C CLC1P17891 233 aa7.7□□□□□ -1.18
DMA1YHR115C ILV3P39522 585 aaKnown RBP7.7□□□□□ -1.18
DMA1YHR115C MTR4P47047 1073 aaKnown RBP7.7□□□□□ -1.18
DMA1YHR115C HIM1Q06674 414 aa7.7□□□□□ -1.18
DMA1YHR115C CSE4P36012 229 aa7.69□□□□□ -1.18
DMA1YHR115C THI22Q06490 572 aa7.69□□□□□ -1.18
DMA1YHR115C OPY1P38271 328 aa7.68□□□□□ -1.18
DMA1YHR115C RGA1P39083 1007 aa7.68□□□□□ -1.18
DMA1YHR115C YIL092WP40497 633 aa7.68□□□□□ -1.18
DMA1YHR115C CPS1P27614 576 aa7.66□□□□□ -1.18
DMA1YHR115C POL32P47110 350 aa7.66□□□□□ -1.18
DMA1YHR115C HAP5Q02516 242 aa7.66□□□□□ -1.18
DMA1YHR115C PEX29Q03370 554 aa7.66□□□□□ -1.18
DMA1YHR115C NOP53Q12080 455 aaKnown RBP7.66□□□□□ -1.18
DMA1YHR115C SIR4P11978 1358 aa7.65□□□□□ -1.18
DMA1YHR115C YIR014WP40570 242 aa7.65□□□□□ -1.18
DMA1YHR115C HEF3P53978 1044 aaKnown RBP7.65□□□□□ -1.18
DMA1YHR115C PUF6Q04373 656 aaKnown RBP7.65□□□□□ -1.18
DMA1YHR115C RTT109Q07794 436 aa7.65□□□□□ -1.18
DMA1YHR115C GAS4Q08271 471 aa7.65□□□□□ -1.18
DMA1YHR115C DNF3Q12674 1656 aa7.65□□□□□ -1.18
DMA1YHR115C BNI4P53858 892 aa7.64□□□□□ -1.19
DMA1YHR115C RPO41P13433 1351 aaKnown RBP7.63□□□□□ -1.19
DMA1YHR115C AUS1Q08409 1394 aa7.63□□□□□ -1.19
DMA1YHR115C RPS24AP0CX31 135 aaKnown RBP7.63□□□□□ -1.19
DMA1YHR115C RPS24BP0CX32 135 aaKnown RBP7.63□□□□□ -1.19
DMA1YHR115C YGR273CP53329 174 aa7.63□□□□□ -1.19
DMA1YHR115C YNR029CP53729 429 aaKnown RBP7.63□□□□□ -1.19
DMA1YHR115C MAK10Q02197 733 aa7.63□□□□□ -1.19
DMA1YHR115C YML082WQ04533 649 aaKnown RBP7.63□□□□□ -1.19
DMA1YHR115C USO1P25386 1790 aa7.62□□□□□ -1.19
DMA1YHR115C YPR148CQ06523 435 aa7.62□□□□□ -1.19
DMA1YHR115C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
DMA1YHR115C SNF7P39929 240 aaKnown RBP7.6□□□□□ -1.19
DMA1YHR115C MPC54Q08550 464 aa7.6□□□□□ -1.19
DMA1YHR115C YRF1-4O13559 1382 aa7.59□□□□□ -1.19
DMA1YHR115C PCT1P13259 424 aa7.59□□□□□ -1.19
DMA1YHR115C AKL1P38080 1108 aaKnown RBP7.59□□□□□ -1.19
DMA1YHR115C GYP7P48365 746 aa7.59□□□□□ -1.19
DMA1YHR115C SRC1Q03707 834 aa7.59□□□□□ -1.19
DMA1YHR115C ECM16Q04217 1267 aaKnown RBP7.59□□□□□ -1.19
DMA1YHR115C VPS24P36095 224 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms