RNA–Protein interactions for RNA: YHR083W

SAM35, Transcript of Component of the sorting and assembly machinery (SAM) complex, yeastyeast

Gene SAM35, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM35YHR083W RRT14P40470 206 aa11.92□□□□□ -0.5
SAM35YHR083W XKS1P42826 600 aa11.92□□□□□ -0.5
SAM35YHR083W MEC3Q02574 474 aa11.92□□□□□ -0.5
SAM35YHR083W KCC4P25389 1037 aa11.91□□□□□ -0.5
SAM35YHR083W ECM16Q04217 1267 aaKnown RBP11.91□□□□□ -0.5
SAM35YHR083W POL32P47110 350 aa11.89□□□□□ -0.51
SAM35YHR083W SRT1Q03175 343 aa11.87□□□□□ -0.51
SAM35YHR083W BMS1Q08965 1183 aaKnown RBP11.87□□□□□ -0.51
SAM35YHR083W RCR1P38212 213 aa11.86□□□□□ -0.51
SAM35YHR083W YPP1P46951 817 aa11.85□□□□□ -0.51
SAM35YHR083W PUF6Q04373 656 aaKnown RBP11.84□□□□□ -0.51
SAM35YHR083W NOP8Q08287 484 aaPredicted RBP11.84□□□□□ -0.51
SAM35YHR083W ENT1Q12518 454 aa11.82□□□□□ -0.52
SAM35YHR083W REB1P21538 810 aa11.81□□□□□ -0.52
SAM35YHR083W IES2P40154 320 aa11.81□□□□□ -0.52
SAM35YHR083W INP54Q08227 384 aaKnown RBP11.81□□□□□ -0.52
SAM35YHR083W YAH1Q12184 172 aaKnown RBP11.81□□□□□ -0.52
SAM35YHR083W NUP145P49687 1317 aa11.81□□□□□ -0.52
SAM35YHR083W ROM2P51862 1356 aaKnown RBP11.8□□□□□ -0.52
SAM35YHR083W COQ4O13525 335 aa11.8□□□□□ -0.52
SAM35YHR083W TRP5P00931 707 aaKnown RBP11.8□□□□□ -0.52
SAM35YHR083W RPS19AP07280 144 aaKnown RBP11.8□□□□□ -0.52
SAM35YHR083W RPS19BP07281 144 aaPredicted RBP11.8□□□□□ -0.52
SAM35YHR083W YBR287WP38355 427 aa11.79□□□□□ -0.52
SAM35YHR083W HGH1P48362 394 aaKnown RBP11.79□□□□□ -0.52
SAM35YHR083W YOL057WQ08225 711 aa11.79□□□□□ -0.52
SAM35YHR083W YNG2P38806 282 aaKnown RBP11.78□□□□□ -0.52
SAM35YHR083W ATG13Q06628 738 aa11.78□□□□□ -0.52
SAM35YHR083W YIR014WP40570 242 aa11.77□□□□□ -0.53
SAM35YHR083W YKL133CP36066 463 aa11.76□□□□□ -0.53
SAM35YHR083W DNM1P54861 757 aa11.76□□□□□ -0.53
SAM35YHR083W ENV9Q08651 330 aa11.76□□□□□ -0.53
SAM35YHR083W CSI1Q04368 295 aa11.75□□□□□ -0.53
SAM35YHR083W MRP7P12687 371 aa11.74□□□□□ -0.53
SAM35YHR083W RAD4P14736 754 aa11.74□□□□□ -0.53
SAM35YHR083W RMT2Q03305 412 aa11.74□□□□□ -0.53
SAM35YHR083W IMH1Q06704 911 aaKnown RBP11.74□□□□□ -0.53
SAM35YHR083W MDG1P53885 366 aa11.73□□□□□ -0.53
SAM35YHR083W NMD2P38798 1089 aaKnown RBP11.72□□□□□ -0.53
SAM35YHR083W YBP2P53169 641 aa11.72□□□□□ -0.53
SAM35YHR083W SPO1P53541 631 aa11.72□□□□□ -0.53
SAM35YHR083W ADE16P54113 591 aaKnown RBP11.72□□□□□ -0.53
SAM35YHR083W OSM1P21375 501 aaKnown RBP11.71□□□□□ -0.53
SAM35YHR083W ALE1Q08548 619 aa11.71□□□□□ -0.53
SAM35YHR083W CST6P40535 587 aa11.7□□□□□ -0.54
SAM35YHR083W SSP2Q08646 371 aa11.7□□□□□ -0.54
SAM35YHR083W RAD50P12753 1312 aa11.69□□□□□ -0.54
SAM35YHR083W EAF7P53911 425 aaKnown RBP11.69□□□□□ -0.54
SAM35YHR083W YDR306CQ06640 478 aa11.69□□□□□ -0.54
SAM35YHR083W YRF1-3P0CX14 1859 aa11.69□□□□□ -0.54
SAM35YHR083W YRF1-7P0CX15 1859 aa11.69□□□□□ -0.54
SAM35YHR083W YRF1-6P53819 1859 aa11.69□□□□□ -0.54
SAM35YHR083W FRK1Q03002 865 aaPredicted RBP11.68□□□□□ -0.54
SAM35YHR083W GCD7P32502 381 aaPredicted RBP11.67□□□□□ -0.54
SAM35YHR083W BOI2P39969 1040 aa11.67□□□□□ -0.54
SAM35YHR083W GRX1P25373 110 aaKnown RBP11.66□□□□□ -0.54
SAM35YHR083W RAD24P32641 659 aa11.66□□□□□ -0.54
SAM35YHR083W APP1P53933 587 aa11.66□□□□□ -0.54
SAM35YHR083W NUP133P36161 1157 aa11.65□□□□□ -0.54
SAM35YHR083W SSF1P38789 453 aaPredicted RBP11.65□□□□□ -0.54
SAM35YHR083W NOP53Q12080 455 aaKnown RBP11.65□□□□□ -0.54
SAM35YHR083W NCB2Q92317 146 aa11.65□□□□□ -0.54
SAM35YHR083W SUP35P05453 685 aaKnown RBP11.64□□□□□ -0.55
SAM35YHR083W RFC1P38630 861 aaKnown RBP11.64□□□□□ -0.55
SAM35YHR083W YJR008WP47085 338 aa11.64□□□□□ -0.55
SAM35YHR083W NKP2Q06162 153 aa11.64□□□□□ -0.55
SAM35YHR083W LAM6Q08001 693 aa11.64□□□□□ -0.55
SAM35YHR083W OPY1P38271 328 aa11.61□□□□□ -0.55
SAM35YHR083W SWI1P09547 1314 aa11.6□□□□□ -0.55
SAM35YHR083W CDC16P09798 840 aa11.6□□□□□ -0.55
SAM35YHR083W IME2P32581 645 aa11.6□□□□□ -0.55
SAM35YHR083W PRP40P33203 583 aaKnown RBP11.6□□□□□ -0.55
SAM35YHR083W BDP1P46678 594 aa11.59□□□□□ -0.55
SAM35YHR083W YLR271WQ06152 274 aa11.59□□□□□ -0.55
SAM35YHR083W PHM7Q12252 991 aa11.59□□□□□ -0.55
SAM35YHR083W COBP00163 385 aa11.58□□□□□ -0.56
SAM35YHR083W ILV3P39522 585 aaKnown RBP11.58□□□□□ -0.56
SAM35YHR083W VPS64Q03944 604 aa11.58□□□□□ -0.56
SAM35YHR083W RIM15P43565 1770 aa11.57□□□□□ -0.56
SAM35YHR083W SET1P38827 1080 aaKnown RBP11.57□□□□□ -0.56
SAM35YHR083W UBP12P39538 1254 aa11.57□□□□□ -0.56
SAM35YHR083W YJL181WP46987 611 aa11.57□□□□□ -0.56
SAM35YHR083W YGR122WP53272 402 aa11.57□□□□□ -0.56
SAM35YHR083W PKH1Q03407 766 aa11.57□□□□□ -0.56
SAM35YHR083W DOT5P40553 215 aa11.56□□□□□ -0.56
SAM35YHR083W ZDS2P54786 942 aa11.56□□□□□ -0.56
SAM35YHR083W GCR2Q01722 534 aa11.56□□□□□ -0.56
SAM35YHR083W FOX2Q02207 900 aaKnown RBP11.56□□□□□ -0.56
SAM35YHR083W PCT1P13259 424 aa11.55□□□□□ -0.56
SAM35YHR083W VPS24P36095 224 aaKnown RBP11.55□□□□□ -0.56
SAM35YHR083W VAS1P07806 1104 aaKnown RBP11.54□□□□□ -0.56
SAM35YHR083W SWC3P31376 625 aa11.54□□□□□ -0.56
SAM35YHR083W YIL055CP40523 627 aaKnown RBP11.54□□□□□ -0.56
SAM35YHR083W MTC5Q03897 1148 aa11.54□□□□□ -0.56
SAM35YHR083W LSP1Q12230 341 aaKnown RBP11.54□□□□□ -0.56
SAM35YHR083W LPD1P09624 499 aaKnown RBP11.53□□□□□ -0.56
SAM35YHR083W TPM1P17536 199 aaKnown RBP11.53□□□□□ -0.56
SAM35YHR083W DLD1P32891 587 aa11.52□□□□□ -0.57
SAM35YHR083W YKR075CP36155 307 aa11.52□□□□□ -0.57
SAM35YHR083W MSB4Q12317 492 aa11.52□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms