RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W IME2P32581 645 aa7.06□□□□□ -1.28
SMF2YHR050W YPR148CQ06523 435 aa7.06□□□□□ -1.28
SMF2YHR050W DPS1P04802 557 aaKnown RBP7.06□□□□□ -1.28
SMF2YHR050W HEF3P53978 1044 aaKnown RBP7.05□□□□□ -1.28
SMF2YHR050W TY4B-HP0C2J7 1802 aa7.05□□□□□ -1.28
SMF2YHR050W TY4B-JP47024 1803 aa7.05□□□□□ -1.28
SMF2YHR050W RPC31P17890 251 aa7.04□□□□□ -1.28
SMF2YHR050W EBP2P36049 427 aaKnown RBP7.04□□□□□ -1.28
SMF2YHR050W BUD27P43573 796 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
SMF2YHR050W APC1P53886 1748 aa7.04□□□□□ -1.28
SMF2YHR050W MST1P07236 462 aa7.03□□□□□ -1.28
SMF2YHR050W THI12P42883 340 aa7.03□□□□□ -1.28
SMF2YHR050W THI5P43534 340 aa7.03□□□□□ -1.28
SMF2YHR050W THI11P47183 340 aa7.03□□□□□ -1.28
SMF2YHR050W THI13Q07748 340 aa7.03□□□□□ -1.28
SMF2YHR050W RTT109Q07794 436 aa7.03□□□□□ -1.28
SMF2YHR050W SIR4P11978 1358 aa7.03□□□□□ -1.28
SMF2YHR050W AKL1P38080 1108 aaKnown RBP7.03□□□□□ -1.28
SMF2YHR050W RCR1P38212 213 aa7.03□□□□□ -1.28
SMF2YHR050W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
SMF2YHR050W MAK21Q12176 1025 aaKnown RBP7.03□□□□□ -1.28
SMF2YHR050W DAL5P15365 543 aa7.02□□□□□ -1.29
SMF2YHR050W YIL092WP40497 633 aa7.02□□□□□ -1.29
SMF2YHR050W OPY1P38271 328 aa7.01□□□□□ -1.29
SMF2YHR050W CLC1P17891 233 aa7□□□□□ -1.29
SMF2YHR050W VPS29P38759 282 aa7□□□□□ -1.29
SMF2YHR050W YAP5P40574 245 aa7□□□□□ -1.29
SMF2YHR050W YNL050CP53952 270 aa7□□□□□ -1.29
SMF2YHR050W YOR238WQ08634 303 aa7□□□□□ -1.29
SMF2YHR050W YRF1-2P40105 1681 aa6.99□□□□□ -1.29
SMF2YHR050W YIL177CP40434 1758 aa6.99□□□□□ -1.29
SMF2YHR050W YJL225CP40889 1758 aa6.99□□□□□ -1.29
SMF2YHR050W DSD1P53095 428 aa6.99□□□□□ -1.29
SMF2YHR050W RRP5Q05022 1729 aaKnown RBP6.99□□□□□ -1.29
SMF2YHR050W YRF1-4O13559 1382 aa6.98□□□□□ -1.29
SMF2YHR050W BUD31P25337 157 aaPredicted RBP6.98□□□□□ -1.29
SMF2YHR050W GYP7P48365 746 aa6.98□□□□□ -1.29
SMF2YHR050W NTH2P35172 780 aa6.97□□□□□ -1.29
SMF2YHR050W MAM1P40065 302 aa6.97□□□□□ -1.29
SMF2YHR050W YFR016CP43597 1233 aaKnown RBP6.97□□□□□ -1.29
SMF2YHR050W POL32P47110 350 aa6.97□□□□□ -1.29
SMF2YHR050W ZDS1P50111 915 aaKnown RBP6.97□□□□□ -1.29
SMF2YHR050W FKS3Q04952 1785 aa6.97□□□□□ -1.29
SMF2YHR050W PRP5P21372 849 aaPredicted RBP6.96□□□□□ -1.29
SMF2YHR050W RRT14P40470 206 aa6.96□□□□□ -1.3
SMF2YHR050W URB1P34241 1764 aaKnown RBP6.95□□□□□ -1.3
SMF2YHR050W PRP45P28004 379 aaPredicted RBP6.95□□□□□ -1.3
SMF2YHR050W HSP104P31539 908 aaKnown RBP6.95□□□□□ -1.3
SMF2YHR050W CTF4Q01454 927 aa6.95□□□□□ -1.3
SMF2YHR050W PUF6Q04373 656 aaKnown RBP6.95□□□□□ -1.3
SMF2YHR050W SLM3Q12093 417 aa6.95□□□□□ -1.3
SMF2YHR050W YIR014WP40570 242 aa6.94□□□□□ -1.3
SMF2YHR050W EAF7P53911 425 aaKnown RBP6.94□□□□□ -1.3
SMF2YHR050W AOS1Q06624 347 aa6.94□□□□□ -1.3
SMF2YHR050W EDE1P34216 1381 aa6.94□□□□□ -1.3
SMF2YHR050W SRT1Q03175 343 aa6.93□□□□□ -1.3
SMF2YHR050W PIB1Q06651 286 aa6.93□□□□□ -1.3
SMF2YHR050W MSB3P48566 633 aaPredicted RBP6.92□□□□□ -1.3
SMF2YHR050W TRP5P00931 707 aaKnown RBP6.91□□□□□ -1.3
SMF2YHR050W YBR287WP38355 427 aa6.91□□□□□ -1.3
SMF2YHR050W LEO1P38439 464 aa6.91□□□□□ -1.3
SMF2YHR050W STS1P38637 319 aa6.91□□□□□ -1.3
SMF2YHR050W YMR1P47147 688 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SMF2YHR050W BMS1Q08965 1183 aaKnown RBP6.91□□□□□ -1.3
SMF2YHR050W TCB1Q12466 1186 aa6.91□□□□□ -1.3
SMF2YHR050W DBP1P24784 617 aaKnown RBP6.9□□□□□ -1.3
SMF2YHR050W NSE3Q05541 303 aa6.9□□□□□ -1.3
SMF2YHR050W UGA3P26370 528 aa6.9□□□□□ -1.31
SMF2YHR050W RAM2P29703 316 aa6.9□□□□□ -1.31
SMF2YHR050W YPP1P46951 817 aa6.9□□□□□ -1.31
SMF2YHR050W COQ4O13525 335 aa6.89□□□□□ -1.31
SMF2YHR050W XKS1P42826 600 aa6.89□□□□□ -1.31
SMF2YHR050W YFR006WP43590 535 aa6.89□□□□□ -1.31
SMF2YHR050W ECM16Q04217 1267 aaKnown RBP6.89□□□□□ -1.31
SMF2YHR050W KCC4P25389 1037 aa6.88□□□□□ -1.31
SMF2YHR050W SNF7P39929 240 aaKnown RBP6.88□□□□□ -1.31
SMF2YHR050W CSI1Q04368 295 aa6.88□□□□□ -1.31
SMF2YHR050W YNG2P38806 282 aaKnown RBP6.87□□□□□ -1.31
SMF2YHR050W UBP9P39967 754 aa6.87□□□□□ -1.31
SMF2YHR050W RPS19AP07280 144 aaKnown RBP6.87□□□□□ -1.31
SMF2YHR050W RPS19BP07281 144 aaPredicted RBP6.87□□□□□ -1.31
SMF2YHR050W LYS2P07702 1392 aa6.86□□□□□ -1.31
SMF2YHR050W TCB2P48231 1178 aa6.86□□□□□ -1.31
SMF2YHR050W NOP8Q08287 484 aaPredicted RBP6.86□□□□□ -1.31
SMF2YHR050W RSF2P46974 1380 aa6.85□□□□□ -1.31
SMF2YHR050W SPO1P53541 631 aa6.85□□□□□ -1.31
SMF2YHR050W YOL057WQ08225 711 aa6.85□□□□□ -1.31
SMF2YHR050W NUP145P49687 1317 aa6.85□□□□□ -1.31
SMF2YHR050W INP54Q08227 384 aaKnown RBP6.84□□□□□ -1.31
SMF2YHR050W YBL029C-AQ3E756 94 aa6.84□□□□□ -1.31
SMF2YHR050W RAD4P14736 754 aa6.84□□□□□ -1.32
SMF2YHR050W ILV3P39522 585 aaKnown RBP6.84□□□□□ -1.32
SMF2YHR050W MEC3Q02574 474 aa6.84□□□□□ -1.32
SMF2YHR050W ROX1P25042 368 aa6.83□□□□□ -1.32
SMF2YHR050W MRP7P12687 371 aa6.82□□□□□ -1.32
SMF2YHR050W RFC1P38630 861 aaKnown RBP6.82□□□□□ -1.32
SMF2YHR050W NMD2P38798 1089 aaKnown RBP6.82□□□□□ -1.32
SMF2YHR050W ENT1Q12518 454 aa6.82□□□□□ -1.32
SMF2YHR050W YRF1-3P0CX14 1859 aa6.82□□□□□ -1.32
SMF2YHR050W YRF1-7P0CX15 1859 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms