RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C KRE33P53914 1056 aaKnown RBP3.62□□□□□ -1.83
RPN1YHR027C DNM1P54861 757 aa3.62□□□□□ -1.83
RPN1YHR027C GGA1Q06336 557 aa3.62□□□□□ -1.83
RPN1YHR027C CAT8P39113 1433 aa3.62□□□□□ -1.83
RPN1YHR027C SUI2P20459 304 aaKnown RBP3.62□□□□□ -1.83
RPN1YHR027C DPH5P32469 300 aaPredicted RBP3.62□□□□□ -1.83
RPN1YHR027C DSF2P38213 736 aa3.62□□□□□ -1.83
RPN1YHR027C SIT1P39980 628 aa3.62□□□□□ -1.83
RPN1YHR027C SEC9P40357 651 aa3.62□□□□□ -1.83
RPN1YHR027C TFG1P41895 735 aaPredicted RBP3.62□□□□□ -1.83
RPN1YHR027C MPP10P47083 593 aaKnown RBP3.62□□□□□ -1.83
RPN1YHR027C PEX19Q07418 342 aa3.62□□□□□ -1.83
RPN1YHR027C NDC80P40460 691 aa3.61□□□□□ -1.83
RPN1YHR027C RRT14P40470 206 aa3.61□□□□□ -1.83
RPN1YHR027C APL6P46682 809 aa3.61□□□□□ -1.83
RPN1YHR027C RAD50P12753 1312 aa3.61□□□□□ -1.83
RPN1YHR027C TY4B-PA0A0B7P3V8 1104 aa3.61□□□□□ -1.83
RPN1YHR027C KEX2P13134 814 aa3.61□□□□□ -1.83
RPN1YHR027C PHO87P25360 923 aa3.61□□□□□ -1.83
RPN1YHR027C RIO2P40160 425 aaKnown RBP3.61□□□□□ -1.83
RPN1YHR027C MPH1P40562 993 aa3.61□□□□□ -1.83
RPN1YHR027C CIR1P42940 261 aa3.61□□□□□ -1.83
RPN1YHR027C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
RPN1YHR027C TPS3P38426 1054 aaKnown RBP3.6□□□□□ -1.83
RPN1YHR027C SEC14P24280 304 aaKnown RBP3.6□□□□□ -1.83
RPN1YHR027C MPE1P35728 441 aaKnown RBP3.6□□□□□ -1.83
RPN1YHR027C SUB1P54000 292 aaKnown RBP3.6□□□□□ -1.83
RPN1YHR027C CFT2Q12102 859 aaPredicted RBP3.6□□□□□ -1.83
RPN1YHR027C GIN4Q12263 1142 aa3.6□□□□□ -1.83
RPN1YHR027C CYC8P14922 966 aa3.6□□□□□ -1.83
RPN1YHR027C RPN12P32496 274 aa3.6□□□□□ -1.83
RPN1YHR027C YKR023WP36119 530 aaKnown RBP3.6□□□□□ -1.83
RPN1YHR027C TY1B-DR3Q99231 1755 aa3.6□□□□□ -1.83
RPN1YHR027C RVS167P39743 482 aaKnown RBP3.59□□□□□ -1.83
RPN1YHR027C MTR4P47047 1073 aaKnown RBP3.59□□□□□ -1.83
RPN1YHR027C ARR1Q06596 294 aa3.59□□□□□ -1.83
RPN1YHR027C PSR1Q07800 427 aa3.59□□□□□ -1.83
RPN1YHR027C SRS2P12954 1174 aa3.59□□□□□ -1.84
RPN1YHR027C MIC60P36112 540 aa3.59□□□□□ -1.84
RPN1YHR027C GDT1P38301 280 aaPredicted RBP3.59□□□□□ -1.84
RPN1YHR027C BDH2P39713 417 aa3.59□□□□□ -1.84
RPN1YHR027C SAP1P39955 897 aaKnown RBP3.59□□□□□ -1.84
RPN1YHR027C MVP1P40959 511 aaKnown RBP3.59□□□□□ -1.84
RPN1YHR027C YGL082WP53155 381 aa3.59□□□□□ -1.84
RPN1YHR027C AOS1Q06624 347 aa3.59□□□□□ -1.84
RPN1YHR027C TLG2Q08144 397 aa3.59□□□□□ -1.84
RPN1YHR027C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
RPN1YHR027C YKL068W-AQ3E826 78 aa3.59□□□□□ -1.84
RPN1YHR027C ISW1P38144 1129 aa3.58□□□□□ -1.84
RPN1YHR027C ARO80Q04052 950 aa3.58□□□□□ -1.84
RPN1YHR027C UBX2Q04228 584 aa3.58□□□□□ -1.84
RPN1YHR027C CIR2Q08822 631 aa3.58□□□□□ -1.84
RPN1YHR027C YPL225WQ08971 146 aaKnown RBP3.58□□□□□ -1.84
RPN1YHR027C PDI1P17967 522 aaKnown RBP3.58□□□□□ -1.84
RPN1YHR027C NUF2P33895 451 aa3.58□□□□□ -1.84
RPN1YHR027C PIM1P36775 1133 aa3.58□□□□□ -1.84
RPN1YHR027C RFC1P38630 861 aaKnown RBP3.58□□□□□ -1.84
RPN1YHR027C INP52P50942 1183 aa3.58□□□□□ -1.84
RPN1YHR027C ORC1P54784 914 aaPredicted RBP3.58□□□□□ -1.84
RPN1YHR027C YDL144CQ07589 356 aa3.58□□□□□ -1.84
RPN1YHR027C YML133CQ03099 1374 aa3.58□□□□□ -1.84
RPN1YHR027C YLL067CQ07888 1374 aa3.58□□□□□ -1.84
RPN1YHR027C YLL066CQ99208 1374 aa3.58□□□□□ -1.84
RPN1YHR027C MRC1P25588 1096 aa3.57□□□□□ -1.84
RPN1YHR027C YMR196WQ04336 1088 aa3.57□□□□□ -1.84
RPN1YHR027C HSC82P15108 705 aaKnown RBP3.57□□□□□ -1.84
RPN1YHR027C HOS4P40480 1083 aa3.57□□□□□ -1.84
RPN1YHR027C NOP7P53261 605 aaKnown RBP3.57□□□□□ -1.84
RPN1YHR027C ARP5P53946 755 aa3.57□□□□□ -1.84
RPN1YHR027C INP2Q03824 705 aa3.57□□□□□ -1.84
RPN1YHR027C GYL1Q04322 720 aa3.57□□□□□ -1.84
RPN1YHR027C ELM1P32801 640 aa3.57□□□□□ -1.84
RPN1YHR027C STE20Q03497 939 aaKnown RBP3.57□□□□□ -1.84
RPN1YHR027C LSO1Q3E827 93 aa3.57□□□□□ -1.84
RPN1YHR027C CDC25P04821 1589 aa3.56□□□□□ -1.84
RPN1YHR027C SWI6P09959 803 aa3.56□□□□□ -1.84
RPN1YHR027C HOT1Q03213 719 aa3.56□□□□□ -1.84
RPN1YHR027C VPS5Q92331 675 aa3.56□□□□□ -1.84
RPN1YHR027C YME2P32843 850 aa3.56□□□□□ -1.84
RPN1YHR027C LAM1P38851 1228 aa3.56□□□□□ -1.84
RPN1YHR027C POL32P47110 350 aa3.56□□□□□ -1.84
RPN1YHR027C NPA3P47122 385 aa3.56□□□□□ -1.84
RPN1YHR027C JJJ1P53863 590 aa3.56□□□□□ -1.84
RPN1YHR027C PSK1P31374 1356 aa3.56□□□□□ -1.84
RPN1YHR027C RAV1P47104 1357 aa3.56□□□□□ -1.84
RPN1YHR027C MAK11P20484 414 aaKnown RBP3.55□□□□□ -1.84
RPN1YHR027C BRF1P29056 596 aa3.55□□□□□ -1.84
RPN1YHR027C MNR2P35724 969 aa3.55□□□□□ -1.84
RPN1YHR027C BRN1P38170 754 aa3.55□□□□□ -1.84
RPN1YHR027C NAB3P38996 802 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RPN1YHR027C CCM1P48237 864 aaPredicted RBP3.55□□□□□ -1.84
RPN1YHR027C PRP31P49704 494 aaPredicted RBP3.55□□□□□ -1.84
RPN1YHR027C HUL5P53119 910 aa3.55□□□□□ -1.84
RPN1YHR027C TIM50Q02776 476 aa3.55□□□□□ -1.84
RPN1YHR027C IMH1Q06704 911 aaKnown RBP3.55□□□□□ -1.84
RPN1YHR027C TY2B-LR1P0C2J3 1770 aa3.55□□□□□ -1.84
RPN1YHR027C TY2B-FP0CX63 1770 aa3.55□□□□□ -1.84
RPN1YHR027C TY2B-GR2P0CX64 1770 aa3.55□□□□□ -1.84
RPN1YHR027C TY2B-CP25384 1770 aa3.55□□□□□ -1.84
RPN1YHR027C TY2B-DR2Q03494 1770 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms