RNA–Protein interactions for RNA: YGR056W

RSC1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC1, Length 2,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC1YGR056W FKH1P40466 484 aa4.53□□□□□ -1.68
RSC1YGR056W URB1P34241 1764 aaKnown RBP4.52□□□□□ -1.69
RSC1YGR056W YMR1P47147 688 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
RSC1YGR056W APP1P53933 587 aa4.52□□□□□ -1.69
RSC1YGR056W SEC3P33332 1336 aaKnown RBP4.52□□□□□ -1.69
RSC1YGR056W PKC1P24583 1151 aa4.52□□□□□ -1.69
RSC1YGR056W SIS2P36024 562 aa4.52□□□□□ -1.69
RSC1YGR056W HGH1P48362 394 aaKnown RBP4.52□□□□□ -1.69
RSC1YGR056W MAK21Q12176 1025 aaKnown RBP4.52□□□□□ -1.69
RSC1YGR056W RPS24AP0CX31 135 aaKnown RBP4.51□□□□□ -1.69
RSC1YGR056W RPS24BP0CX32 135 aaKnown RBP4.51□□□□□ -1.69
RSC1YGR056W PDI1P17967 522 aaKnown RBP4.51□□□□□ -1.69
RSC1YGR056W DBP1P24784 617 aaKnown RBP4.51□□□□□ -1.69
RSC1YGR056W ATF2P53296 535 aa4.51□□□□□ -1.69
RSC1YGR056W HPC2Q01448 625 aa4.51□□□□□ -1.69
RSC1YGR056W IOC4Q04213 475 aa4.51□□□□□ -1.69
RSC1YGR056W PRP5P21372 849 aaPredicted RBP4.51□□□□□ -1.69
RSC1YGR056W YML020WQ03722 664 aa4.51□□□□□ -1.69
RSC1YGR056W APC1P53886 1748 aa4.5□□□□□ -1.69
RSC1YGR056W NSR1P27476 414 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
RSC1YGR056W PTC3P34221 468 aaKnown RBP4.5□□□□□ -1.69
RSC1YGR056W RTF1P53064 558 aa4.5□□□□□ -1.69
RSC1YGR056W ENT1Q12518 454 aa4.5□□□□□ -1.69
RSC1YGR056W MST1P07236 462 aa4.5□□□□□ -1.69
RSC1YGR056W YFR016CP43597 1233 aaKnown RBP4.5□□□□□ -1.69
RSC1YGR056W PRP43P53131 767 aaKnown RBP4.5□□□□□ -1.69
RSC1YGR056W YDR090CQ03193 310 aa4.5□□□□□ -1.69
RSC1YGR056W SNF2P22082 1703 aa4.49□□□□□ -1.69
RSC1YGR056W DPS1P04802 557 aaKnown RBP4.48□□□□□ -1.69
RSC1YGR056W MSB3P48566 633 aaPredicted RBP4.48□□□□□ -1.69
RSC1YGR056W ENV9Q08651 330 aa4.48□□□□□ -1.69
RSC1YGR056W SPT7P35177 1332 aa4.48□□□□□ -1.69
RSC1YGR056W KAR2P16474 682 aaKnown RBP4.48□□□□□ -1.69
RSC1YGR056W VHR2P40041 505 aa4.48□□□□□ -1.69
RSC1YGR056W IMH1Q06704 911 aaKnown RBP4.48□□□□□ -1.69
RSC1YGR056W SUB2Q07478 446 aaKnown RBP4.48□□□□□ -1.69
RSC1YGR056W GAS4Q08271 471 aa4.48□□□□□ -1.69
RSC1YGR056W GLN1P32288 370 aaKnown RBP4.47□□□□□ -1.69
RSC1YGR056W GRX4P32642 244 aa4.47□□□□□ -1.69
RSC1YGR056W UBP14P38237 781 aaKnown RBP4.47□□□□□ -1.69
RSC1YGR056W TAP42Q04372 366 aa4.47□□□□□ -1.69
RSC1YGR056W NOP8Q08287 484 aaPredicted RBP4.47□□□□□ -1.69
RSC1YGR056W TCB1Q12466 1186 aa4.47□□□□□ -1.69
RSC1YGR056W AUS1Q08409 1394 aa4.47□□□□□ -1.69
RSC1YGR056W UBP9P39967 754 aa4.47□□□□□ -1.69
RSC1YGR056W NST1P53935 1240 aa4.47□□□□□ -1.69
RSC1YGR056W SLM3Q12093 417 aa4.47□□□□□ -1.69
RSC1YGR056W RSF2P46974 1380 aa4.46□□□□□ -1.69
RSC1YGR056W YRF1-3P0CX14 1859 aa4.46□□□□□ -1.7
RSC1YGR056W YRF1-7P0CX15 1859 aa4.46□□□□□ -1.7
RSC1YGR056W YRF1-6P53819 1859 aa4.46□□□□□ -1.7
RSC1YGR056W SSA1P10591 642 aaKnown RBP4.45□□□□□ -1.7
RSC1YGR056W ENP1P38333 483 aaKnown RBP4.45□□□□□ -1.7
RSC1YGR056W HIM1Q06674 414 aa4.45□□□□□ -1.7
RSC1YGR056W YLR326WQ06170 240 aaKnown RBP4.45□□□□□ -1.7
RSC1YGR056W YOR238WQ08634 303 aa4.45□□□□□ -1.7
RSC1YGR056W YEF3P16521 1044 aaKnown RBP4.44□□□□□ -1.7
RSC1YGR056W GEF1P37020 779 aa4.44□□□□□ -1.7
RSC1YGR056W BIM1P40013 344 aa4.44□□□□□ -1.7
RSC1YGR056W ATG32P40458 529 aa4.44□□□□□ -1.7
RSC1YGR056W RPO41P13433 1351 aaKnown RBP4.44□□□□□ -1.7
RSC1YGR056W TRK1P12685 1235 aa4.44□□□□□ -1.7
RSC1YGR056W BRL1P38770 471 aa4.44□□□□□ -1.7
RSC1YGR056W SLX8P40072 274 aa4.44□□□□□ -1.7
RSC1YGR056W XKS1P42826 600 aa4.44□□□□□ -1.7
RSC1YGR056W PAP2P53632 584 aaKnown RBP4.44□□□□□ -1.7
RSC1YGR056W KTR1P27810 393 aaKnown RBP4.43□□□□□ -1.7
RSC1YGR056W YJL007CP47080 104 aa4.43□□□□□ -1.7
RSC1YGR056W ROM2P51862 1356 aaKnown RBP4.43□□□□□ -1.7
RSC1YGR056W PIB1Q06651 286 aa4.43□□□□□ -1.7
RSC1YGR056W RIM15P43565 1770 aa4.43□□□□□ -1.7
RSC1YGR056W SIR4P11978 1358 aa4.42□□□□□ -1.7
RSC1YGR056W ERG12P07277 443 aa4.42□□□□□ -1.7
RSC1YGR056W EBP2P36049 427 aaKnown RBP4.42□□□□□ -1.7
RSC1YGR056W CSN12P47130 423 aa4.42□□□□□ -1.7
RSC1YGR056W YRB30P53107 440 aaPredicted RBP4.42□□□□□ -1.7
RSC1YGR056W CAB3P36076 571 aa4.41□□□□□ -1.7
RSC1YGR056W YAP5P40574 245 aa4.41□□□□□ -1.7
RSC1YGR056W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
RSC1YGR056W YMR074CQ04773 145 aa4.41□□□□□ -1.7
RSC1YGR056W YKL133CP36066 463 aa4.4□□□□□ -1.7
RSC1YGR056W SSA2P10592 639 aaKnown RBP4.4□□□□□ -1.71
RSC1YGR056W PCS60P38137 543 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
RSC1YGR056W KRI1P42846 591 aaKnown RBP4.4□□□□□ -1.71
RSC1YGR056W MEC3Q02574 474 aa4.4□□□□□ -1.71
RSC1YGR056W YRF1-4O13559 1382 aa4.4□□□□□ -1.71
RSC1YGR056W VMA1P17255 1071 aaKnown RBP4.39□□□□□ -1.71
RSC1YGR056W TYW1Q08960 810 aaKnown RBP4.39□□□□□ -1.71
RSC1YGR056W EDE1P34216 1381 aa4.39□□□□□ -1.71
RSC1YGR056W PSE1P32337 1089 aaKnown RBP4.39□□□□□ -1.71
RSC1YGR056W AKL1P38080 1108 aaKnown RBP4.39□□□□□ -1.71
RSC1YGR056W RTR1P40084 226 aaPredicted RBP4.39□□□□□ -1.71
RSC1YGR056W DOT5P40553 215 aa4.39□□□□□ -1.71
RSC1YGR056W TIF1P10081 395 aaKnown RBP4.38□□□□□ -1.71
RSC1YGR056W HSP104P31539 908 aaKnown RBP4.38□□□□□ -1.71
RSC1YGR056W FOX2Q02207 900 aaKnown RBP4.38□□□□□ -1.71
RSC1YGR056W SOL3P38858 249 aa4.38□□□□□ -1.71
RSC1YGR056W DSD1P53095 428 aa4.38□□□□□ -1.71
RSC1YGR056W RRP46P53256 223 aaPredicted RBP4.38□□□□□ -1.71
RSC1YGR056W FRK1Q03002 865 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms