RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG1YGL180W ACF4P47129 309 aa6.62□□□□□ -1.35
ATG1YGL180W PNP1Q05788 311 aa6.62□□□□□ -1.35
ATG1YGL180W YPR084WQ06821 456 aa6.62□□□□□ -1.35
ATG1YGL180W BDF2Q07442 638 aa6.62□□□□□ -1.35
ATG1YGL180W SSB1P11484 613 aaKnown RBP6.62□□□□□ -1.35
ATG1YGL180W SUV3P32580 737 aa6.62□□□□□ -1.35
ATG1YGL180W SSB2P40150 613 aaKnown RBP6.62□□□□□ -1.35
ATG1YGL180W TPM2P40414 161 aa6.62□□□□□ -1.35
ATG1YGL180W YPR109WQ06104 294 aa6.62□□□□□ -1.35
ATG1YGL180W PHO4P07270 312 aaKnown RBP6.61□□□□□ -1.35
ATG1YGL180W PBP2P38151 413 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
ATG1YGL180W ACS2P52910 683 aaKnown RBP6.61□□□□□ -1.35
ATG1YGL180W YOL057WQ08225 711 aa6.61□□□□□ -1.35
ATG1YGL180W ISF1P32488 338 aa6.61□□□□□ -1.35
ATG1YGL180W QDR1P40475 563 aa6.61□□□□□ -1.35
ATG1YGL180W KTR7P40504 517 aa6.61□□□□□ -1.35
ATG1YGL180W TOS4Q06266 489 aa6.61□□□□□ -1.35
ATG1YGL180W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
ATG1YGL180W BOI1P38041 980 aaKnown RBP6.6□□□□□ -1.35
ATG1YGL180W SLI15P38283 698 aa6.6□□□□□ -1.35
ATG1YGL180W YJR142WP47173 342 aa6.6□□□□□ -1.35
ATG1YGL180W UBP12P39538 1254 aa6.59□□□□□ -1.35
ATG1YGL180W PIB1Q06651 286 aa6.59□□□□□ -1.35
ATG1YGL180W AI4P03878 556 aa6.58□□□□□ -1.36
ATG1YGL180W MPH3P0CE00 602 aa6.58□□□□□ -1.36
ATG1YGL180W PPG1P32838 368 aa6.58□□□□□ -1.36
ATG1YGL180W MCM2P29469 868 aa6.58□□□□□ -1.36
ATG1YGL180W YMR196WQ04336 1088 aa6.58□□□□□ -1.36
ATG1YGL180W CSC1Q06538 782 aa6.58□□□□□ -1.36
ATG1YGL180W PHO87P25360 923 aa6.57□□□□□ -1.36
ATG1YGL180W DAK2P43550 591 aa6.57□□□□□ -1.36
ATG1YGL180W MIP1P15801 1254 aa6.57□□□□□ -1.36
ATG1YGL180W SRP40P32583 406 aaPredicted RBP6.57□□□□□ -1.36
ATG1YGL180W TFG1P41895 735 aaPredicted RBP6.57□□□□□ -1.36
ATG1YGL180W YPP1P46951 817 aa6.57□□□□□ -1.36
ATG1YGL180W TRM1P15565 570 aaKnown RBP6.56□□□□□ -1.36
ATG1YGL180W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36 RIP-Chip
ATG1YGL180W YKL091CP33324 310 aaKnown RBP6.56□□□□□ -1.36
ATG1YGL180W LSO1Q3E827 93 aa6.56□□□□□ -1.36
ATG1YGL180W YHR020WP38708 688 aaKnown RBP6.55□□□□□ -1.36
ATG1YGL180W EMP47P43555 445 aa6.55□□□□□ -1.36
ATG1YGL180W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
ATG1YGL180W SRS2P12954 1174 aa6.54□□□□□ -1.36
ATG1YGL180W SLX5P32828 619 aaKnown RBP6.54□□□□□ -1.36
ATG1YGL180W ISW1P38144 1129 aa6.54□□□□□ -1.36
ATG1YGL180W FRA1Q07825 749 aa6.54□□□□□ -1.36
ATG1YGL180W MGE1P38523 228 aa6.53□□□□□ -1.36
ATG1YGL180W YJL049WP47048 450 aa6.53□□□□□ -1.36
ATG1YGL180W STI1P15705 589 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
ATG1YGL180W SLY41P22215 453 aa6.53□□□□□ -1.36
ATG1YGL180W THI12P42883 340 aa6.53□□□□□ -1.36
ATG1YGL180W THI5P43534 340 aa6.53□□□□□ -1.36
ATG1YGL180W THI11P47183 340 aa6.53□□□□□ -1.36
ATG1YGL180W CDC73Q06697 393 aa6.53□□□□□ -1.36
ATG1YGL180W THI13Q07748 340 aa6.53□□□□□ -1.36
ATG1YGL180W GLO3P38682 493 aaKnown RBP6.53□□□□□ -1.36
ATG1YGL180W BRE1Q07457 700 aaKnown RBP6.53□□□□□ -1.36
ATG1YGL180W YOL036WQ08206 761 aa6.53□□□□□ -1.36
ATG1YGL180W APC11Q12157 165 aa6.52□□□□□ -1.37
ATG1YGL180W AGE1Q04412 482 aa6.52□□□□□ -1.37
ATG1YGL180W CDC11P32458 415 aa6.51□□□□□ -1.37
ATG1YGL180W MNN1P39106 762 aa6.51□□□□□ -1.37
ATG1YGL180W TUB4P53378 473 aa6.51□□□□□ -1.37
ATG1YGL180W ERF2Q06551 359 aa6.51□□□□□ -1.37
ATG1YGL180W TFB4Q12004 338 aa6.51□□□□□ -1.37
ATG1YGL180W RPT1P33299 467 aaKnown RBP6.51□□□□□ -1.37
ATG1YGL180W YNL115CP53925 644 aa6.51□□□□□ -1.37
ATG1YGL180W TRS120Q04183 1289 aa6.51□□□□□ -1.37
ATG1YGL180W POB3Q04636 552 aaKnown RBP6.51□□□□□ -1.37
ATG1YGL180W YDL121CQ07541 149 aa6.5□□□□□ -1.37
ATG1YGL180W RPA135P22138 1203 aaKnown RBP6.5□□□□□ -1.37
ATG1YGL180W VMA4P22203 233 aaKnown RBP6.5□□□□□ -1.37
ATG1YGL180W PAF1P38351 445 aa6.5□□□□□ -1.37
ATG1YGL180W NAB3P38996 802 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
ATG1YGL180W BOI2P39969 1040 aa6.5□□□□□ -1.37
ATG1YGL180W ESF1Q06344 628 aaKnown RBP6.5□□□□□ -1.37
ATG1YGL180W CYC8P14922 966 aa6.49□□□□□ -1.37
ATG1YGL180W HAP4P14064 554 aa6.49□□□□□ -1.37
ATG1YGL180W DUT1P33317 147 aa6.49□□□□□ -1.37
ATG1YGL180W DNM1P54861 757 aa6.49□□□□□ -1.37
ATG1YGL180W RMD1Q03441 430 aa6.49□□□□□ -1.37
ATG1YGL180W HAL5P38970 855 aaKnown RBP6.48□□□□□ -1.37
ATG1YGL180W KRI1P42846 591 aaKnown RBP6.48□□□□□ -1.37
ATG1YGL180W GYP5Q12344 894 aa6.48□□□□□ -1.37
ATG1YGL180W FUR4P05316 633 aaKnown RBP6.48□□□□□ -1.37
ATG1YGL180W GRX1P25373 110 aaKnown RBP6.48□□□□□ -1.37
ATG1YGL180W HUL5P53119 910 aa6.48□□□□□ -1.37
ATG1YGL180W YGL081WP53156 320 aa6.48□□□□□ -1.37
ATG1YGL180W UTP13Q05946 817 aaKnown RBP6.48□□□□□ -1.37
ATG1YGL180W TSC13Q99190 310 aa6.48□□□□□ -1.37
ATG1YGL180W FUI1P38196 639 aa6.47□□□□□ -1.37
ATG1YGL180W GAL11P19659 1081 aa6.47□□□□□ -1.37
ATG1YGL180W DAN4P47179 1161 aa6.47□□□□□ -1.37
ATG1YGL180W PUN1Q06991 263 aa6.47□□□□□ -1.37
ATG1YGL180W TUM1Q08686 304 aaKnown RBP6.47□□□□□ -1.37
ATG1YGL180W TIM23P32897 222 aa6.46□□□□□ -1.37
ATG1YGL180W YAP5P40574 245 aa6.46□□□□□ -1.37
ATG1YGL180W YFR016CP43597 1233 aaKnown RBP6.46□□□□□ -1.37
ATG1YGL180W GAS4Q08271 471 aa6.46□□□□□ -1.37
ATG1YGL180W CDC53Q12018 815 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms