RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W SEC7P11075 2009 aaKnown RBP9.04□□□□□ -0.96
SNF4YGL115W ORC1P54784 914 aaPredicted RBP9.03□□□□□ -0.96
SNF4YGL115W YDR090CQ03193 310 aa9.03□□□□□ -0.96
SNF4YGL115W DMA1P38823 416 aa9.01□□□□□ -0.97
SNF4YGL115W PTC2P39966 464 aaKnown RBP9.01□□□□□ -0.97
SNF4YGL115W IOC4Q04213 475 aa9.01□□□□□ -0.97
SNF4YGL115W REF2P42073 533 aaPredicted RBP9□□□□□ -0.97
SNF4YGL115W IME2P32581 645 aa8.99□□□□□ -0.97
SNF4YGL115W XDJ1P39102 459 aa8.99□□□□□ -0.97
SNF4YGL115W CDC45Q08032 650 aa8.99□□□□□ -0.97
SNF4YGL115W ESL2P36168 1195 aa8.98□□□□□ -0.97
SNF4YGL115W VPS27P40343 622 aaKnown RBP8.98□□□□□ -0.97
SNF4YGL115W ISU2Q12056 156 aa8.98□□□□□ -0.97
SNF4YGL115W BNR1P40450 1375 aa8.98□□□□□ -0.97
SNF4YGL115W KIC1P38692 1080 aa8.96□□□□□ -0.98
SNF4YGL115W YML082WQ04533 649 aaKnown RBP8.96□□□□□ -0.98
SNF4YGL115W DRS2P39524 1355 aa8.96□□□□□ -0.98
SNF4YGL115W PDR11P40550 1411 aa8.96□□□□□ -0.98
SNF4YGL115W RPC31P17890 251 aa8.95□□□□□ -0.98
SNF4YGL115W CAB3P36076 571 aa8.95□□□□□ -0.98
SNF4YGL115W TAF5P38129 798 aa8.94□□□□□ -0.98
SNF4YGL115W OPY1P38271 328 aa8.94□□□□□ -0.98
SNF4YGL115W KIP3P53086 805 aaKnown RBP8.94□□□□□ -0.98
SNF4YGL115W YRB30P53107 440 aaPredicted RBP8.94□□□□□ -0.98
SNF4YGL115W VMR1P38735 1592 aa8.94□□□□□ -0.98
SNF4YGL115W DOP1Q03921 1698 aa8.94□□□□□ -0.98
SNF4YGL115W YPR015CQ12531 247 aa8.93□□□□□ -0.98
SNF4YGL115W MET5P47169 1442 aa8.92□□□□□ -0.98
SNF4YGL115W PDR1P12383 1068 aa8.92□□□□□ -0.98
SNF4YGL115W NUP192P47054 1683 aa8.91□□□□□ -0.98
SNF4YGL115W CLC1P17891 233 aa8.91□□□□□ -0.98
SNF4YGL115W MLP1Q02455 1875 aaKnown RBP8.91□□□□□ -0.98
SNF4YGL115W RAM1P22007 431 aa8.9□□□□□ -0.98
SNF4YGL115W FPR3P38911 411 aaKnown RBP8.9□□□□□ -0.98
SNF4YGL115W RVB2Q12464 471 aaKnown RBP8.9□□□□□ -0.98
SNF4YGL115W NUP188P52593 1655 aaKnown RBP8.89□□□□□ -0.99
SNF4YGL115W YIR014WP40570 242 aa8.89□□□□□ -0.99
SNF4YGL115W DNF2Q12675 1612 aa8.89□□□□□ -0.99
SNF4YGL115W RPP1BP10622 106 aaKnown RBP8.88□□□□□ -0.99
SNF4YGL115W EBP2P36049 427 aaKnown RBP8.88□□□□□ -0.99
SNF4YGL115W IML1P47170 1584 aa8.87□□□□□ -0.99
SNF4YGL115W COX6P00427 148 aa8.85□□□□□ -0.99
SNF4YGL115W SPE2P21182 396 aa8.85□□□□□ -0.99
SNF4YGL115W FUN12P39730 1002 aaKnown RBP8.85□□□□□ -0.99
SNF4YGL115W EAF7P53911 425 aaKnown RBP8.84□□□□□ -0.99
SNF4YGL115W DPS1P04802 557 aaKnown RBP8.83□□□□□ -1
SNF4YGL115W ORC6P38826 435 aa8.83□□□□□ -1
SNF4YGL115W YFR016CP43597 1233 aaKnown RBP8.83□□□□□ -1
SNF4YGL115W PEX21P50091 288 aa8.83□□□□□ -1
SNF4YGL115W YDL144CQ07589 356 aa8.83□□□□□ -1
SNF4YGL115W YRR1Q12172 810 aa8.83□□□□□ -1
SNF4YGL115W GAP1P19145 602 aaPredicted RBP8.82□□□□□ -1
SNF4YGL115W MAK21Q12176 1025 aaKnown RBP8.82□□□□□ -1
SNF4YGL115W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
SNF4YGL115W SNF2P22082 1703 aa8.8□□□□□ -1
SNF4YGL115W TUM1Q08686 304 aaKnown RBP8.8□□□□□ -1
SNF4YGL115W PBS2P08018 668 aa8.79□□□□□ -1
SNF4YGL115W SUI2P20459 304 aaKnown RBP8.79□□□□□ -1
SNF4YGL115W SNF7P39929 240 aaKnown RBP8.79□□□□□ -1
SNF4YGL115W CSC1Q06538 782 aa8.79□□□□□ -1
SNF4YGL115W TRM3Q07527 1436 aa8.78□□□□□ -1
SNF4YGL115W GYP1Q08484 637 aa8.77□□□□□ -1.01
SNF4YGL115W TFB4Q12004 338 aa8.77□□□□□ -1.01
SNF4YGL115W YEF3P16521 1044 aaKnown RBP8.76□□□□□ -1.01
SNF4YGL115W YAP3P38749 330 aa8.76□□□□□ -1.01
SNF4YGL115W TRK1P12685 1235 aa8.75□□□□□ -1.01
SNF4YGL115W BCK1Q01389 1478 aa8.75□□□□□ -1.01
SNF4YGL115W CHZ1P40019 153 aaPredicted RBP8.74□□□□□ -1.01
SNF4YGL115W MVP1P40959 511 aaKnown RBP8.74□□□□□ -1.01
SNF4YGL115W STR2P47164 639 aa8.73□□□□□ -1.01
SNF4YGL115W HAP1P0CE41 1502 aa8.72□□□□□ -1.01
SNF4YGL115W ROX1P25042 368 aa8.72□□□□□ -1.01
SNF4YGL115W ALD4P46367 519 aaKnown RBP8.72□□□□□ -1.01
SNF4YGL115W BUD20Q08004 166 aaPredicted RBP8.72□□□□□ -1.01
SNF4YGL115W RAD2P07276 1031 aa8.71□□□□□ -1.02
SNF4YGL115W NUD1P32336 851 aa8.71□□□□□ -1.02
SNF4YGL115W MPP10P47083 593 aaKnown RBP8.71□□□□□ -1.02
SNF4YGL115W ISM1P48526 1002 aa8.71□□□□□ -1.02
SNF4YGL115W TAF8Q03750 510 aa8.71□□□□□ -1.02
SNF4YGL115W RGR1P19263 1082 aa8.7□□□□□ -1.02
SNF4YGL115W BUD27P43573 796 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
SNF4YGL115W TCB2P48231 1178 aa8.7□□□□□ -1.02
SNF4YGL115W YRF1-4O13559 1382 aa8.69□□□□□ -1.02
SNF4YGL115W YML133CQ03099 1374 aa8.69□□□□□ -1.02
SNF4YGL115W YLL067CQ07888 1374 aa8.69□□□□□ -1.02
SNF4YGL115W YLL066CQ99208 1374 aa8.69□□□□□ -1.02
SNF4YGL115W DNF3Q12674 1656 aa8.69□□□□□ -1.02
SNF4YGL115W RAS1P01119 309 aa8.68□□□□□ -1.02
SNF4YGL115W YPR109WQ06104 294 aa8.68□□□□□ -1.02
SNF4YGL115W KRE5P22023 1365 aa8.68□□□□□ -1.02
SNF4YGL115W PCT1P13259 424 aa8.67□□□□□ -1.02
SNF4YGL115W SDH2P21801 266 aa8.67□□□□□ -1.02
SNF4YGL115W SAP155P43612 1002 aa8.67□□□□□ -1.02
SNF4YGL115W RRP46P53256 223 aaPredicted RBP8.67□□□□□ -1.02
SNF4YGL115W MAM3Q12296 706 aa8.67□□□□□ -1.02
SNF4YGL115W RAD9P14737 1309 aa8.66□□□□□ -1.02
SNF4YGL115W NAP1P25293 417 aaKnown RBP8.66□□□□□ -1.02
SNF4YGL115W IPL1P38991 367 aa8.66□□□□□ -1.02
SNF4YGL115W RTR1P40084 226 aaPredicted RBP8.65□□□□□ -1.02
SNF4YGL115W YIL092WP40497 633 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms