RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C GCN1P33892 2672 aaKnown RBP4.43□□□□□ -1.7
PRE4YFR050C XDJ1P39102 459 aa4.43□□□□□ -1.7
PRE4YFR050C RPN11P43588 306 aaKnown RBP4.43□□□□□ -1.7
PRE4YFR050C YPR148CQ06523 435 aa4.43□□□□□ -1.7
PRE4YFR050C PDR5P33302 1511 aaKnown RBP4.42□□□□□ -1.7
PRE4YFR050C ETP1P38748 585 aaKnown RBP4.42□□□□□ -1.7
PRE4YFR050C ALD2P47771 506 aa4.42□□□□□ -1.7
PRE4YFR050C YGR273CP53329 174 aa4.42□□□□□ -1.7
PRE4YFR050C SMC4Q12267 1418 aa4.42□□□□□ -1.7
PRE4YFR050C SEC7P11075 2009 aaKnown RBP4.41□□□□□ -1.7
PRE4YFR050C PAM1P37304 830 aaKnown RBP4.41□□□□□ -1.7
PRE4YFR050C SRC1Q03707 834 aa4.41□□□□□ -1.7
PRE4YFR050C CUP1-1P0CX80 61 aa4.4□□□□□ -1.71
PRE4YFR050C CUP1-2P0CX81 61 aa4.4□□□□□ -1.71
PRE4YFR050C SOL3P38858 249 aa4.4□□□□□ -1.71
PRE4YFR050C VHR2P40041 505 aa4.4□□□□□ -1.71
PRE4YFR050C AI4P03878 556 aa4.39□□□□□ -1.71
PRE4YFR050C VRP1P37370 817 aa4.39□□□□□ -1.71
PRE4YFR050C SAS10Q12136 610 aaPredicted RBP4.39□□□□□ -1.71
PRE4YFR050C POL1P13382 1468 aa4.38□□□□□ -1.71
PRE4YFR050C MPH3P0CE00 602 aa4.38□□□□□ -1.71
PRE4YFR050C REF2P42073 533 aaPredicted RBP4.38□□□□□ -1.71
PRE4YFR050C CKB1P43639 278 aa4.38□□□□□ -1.71
PRE4YFR050C PML39Q03760 334 aa4.38□□□□□ -1.71
PRE4YFR050C DPS1P04802 557 aaKnown RBP4.37□□□□□ -1.71
PRE4YFR050C KIC1P38692 1080 aa4.37□□□□□ -1.71
PRE4YFR050C NPR2P39923 615 aa4.37□□□□□ -1.71
PRE4YFR050C NST1P53935 1240 aa4.37□□□□□ -1.71
PRE4YFR050C PEX29Q03370 554 aa4.37□□□□□ -1.71
PRE4YFR050C KEX1P09620 729 aa4.36□□□□□ -1.71
PRE4YFR050C RAD54P32863 898 aa4.35□□□□□ -1.71
PRE4YFR050C RTT106P40161 455 aa4.35□□□□□ -1.71
PRE4YFR050C YLR326WQ06170 240 aaKnown RBP4.35□□□□□ -1.71
PRE4YFR050C YMR084WA2P2R3 262 aa4.34□□□□□ -1.71
PRE4YFR050C SPB4P25808 606 aaPredicted RBP4.34□□□□□ -1.71
PRE4YFR050C UBP14P38237 781 aaKnown RBP4.34□□□□□ -1.71
PRE4YFR050C PBS2P08018 668 aa4.33□□□□□ -1.72
PRE4YFR050C ILV3P39522 585 aaKnown RBP4.33□□□□□ -1.72
PRE4YFR050C MID1P41821 548 aa4.33□□□□□ -1.72
PRE4YFR050C URN1Q06525 465 aaKnown RBP4.33□□□□□ -1.72
PRE4YFR050C YLR278CQ05854 1341 aa4.32□□□□□ -1.72
PRE4YFR050C MAK21Q12176 1025 aaKnown RBP4.32□□□□□ -1.72
PRE4YFR050C FAB1P34756 2278 aa4.32□□□□□ -1.72
PRE4YFR050C RPP1BP10622 106 aaKnown RBP4.31□□□□□ -1.72
PRE4YFR050C PCS60P38137 543 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72 RIP-Chip
PRE4YFR050C SLI15P38283 698 aa4.31□□□□□ -1.72
PRE4YFR050C EAF6P47128 113 aa4.31□□□□□ -1.72
PRE4YFR050C SQS1P53866 767 aaKnown RBP4.31□□□□□ -1.72
PRE4YFR050C ELP4Q02884 456 aaKnown RBP4.3□□□□□ -1.72
PRE4YFR050C YDR090CQ03193 310 aa4.3□□□□□ -1.72
PRE4YFR050C COX6P00427 148 aa4.29□□□□□ -1.72
PRE4YFR050C MAM3Q12296 706 aa4.29□□□□□ -1.72
PRE4YFR050C DPL1Q05567 589 aa4.28□□□□□ -1.72
PRE4YFR050C MPC54Q08550 464 aa4.28□□□□□ -1.72
PRE4YFR050C FMP27Q06179 2628 aa4.27□□□□□ -1.73
PRE4YFR050C LEU3P08638 886 aa4.27□□□□□ -1.73
PRE4YFR050C DSF2P38213 736 aa4.26□□□□□ -1.73
PRE4YFR050C IES2P40154 320 aa4.26□□□□□ -1.73
PRE4YFR050C HAP5Q02516 242 aa4.26□□□□□ -1.73
PRE4YFR050C CDC73Q06697 393 aa4.26□□□□□ -1.73
PRE4YFR050C IRA1P18963 3092 aa4.25□□□□□ -1.73
PRE4YFR050C SRB8P25648 1427 aa4.25□□□□□ -1.73
PRE4YFR050C DOT5P40553 215 aa4.25□□□□□ -1.73
PRE4YFR050C ARH1P48360 493 aa4.25□□□□□ -1.73
PRE4YFR050C NMA111P53920 997 aa4.25□□□□□ -1.73
PRE4YFR050C RSF2P46974 1380 aa4.25□□□□□ -1.73
PRE4YFR050C IPL1P38991 367 aa4.24□□□□□ -1.73
PRE4YFR050C DLD1P32891 587 aa4.23□□□□□ -1.73
PRE4YFR050C ISU2Q12056 156 aa4.23□□□□□ -1.73
PRE4YFR050C SPT23P35210 1082 aa4.22□□□□□ -1.73
PRE4YFR050C TYS1P36421 394 aaKnown RBP4.22□□□□□ -1.73
PRE4YFR050C ORC6P38826 435 aa4.22□□□□□ -1.73
PRE4YFR050C CSC1Q06538 782 aa4.22□□□□□ -1.73
PRE4YFR050C SRF1Q12516 437 aa4.22□□□□□ -1.73
PRE4YFR050C PTC2P39966 464 aaKnown RBP4.21□□□□□ -1.74
PRE4YFR050C IRA2P19158 3079 aa4.21□□□□□ -1.74
PRE4YFR050C STH1P32597 1359 aa4.2□□□□□ -1.74
PRE4YFR050C BNI4P53858 892 aa4.2□□□□□ -1.74
PRE4YFR050C TFB4Q12004 338 aa4.2□□□□□ -1.74
PRE4YFR050C PSE1P32337 1089 aaKnown RBP4.19□□□□□ -1.74
PRE4YFR050C TUM1Q08686 304 aaKnown RBP4.19□□□□□ -1.74
PRE4YFR050C YRR1Q12172 810 aa4.19□□□□□ -1.74
PRE4YFR050C UTP20P35194 2493 aaKnown RBP4.18□□□□□ -1.74
PRE4YFR050C EDE1P34216 1381 aa4.18□□□□□ -1.74
PRE4YFR050C MVP1P40959 511 aaKnown RBP4.18□□□□□ -1.74
PRE4YFR050C NUP42P49686 430 aaKnown RBP4.18□□□□□ -1.74
PRE4YFR050C SNF2P22082 1703 aa4.18□□□□□ -1.74
PRE4YFR050C RRP5Q05022 1729 aaKnown RBP4.18□□□□□ -1.74
PRE4YFR050C URB1P34241 1764 aaKnown RBP4.17□□□□□ -1.74
PRE4YFR050C GAP1P19145 602 aaPredicted RBP4.17□□□□□ -1.74
PRE4YFR050C RGR1P19263 1082 aa4.17□□□□□ -1.74
PRE4YFR050C DIT2P21595 489 aa4.17□□□□□ -1.74
PRE4YFR050C YJL181WP46987 611 aa4.17□□□□□ -1.74
PRE4YFR050C FOX2Q02207 900 aaKnown RBP4.17□□□□□ -1.74
PRE4YFR050C CAT8P39113 1433 aa4.16□□□□□ -1.74
PRE4YFR050C NCS6P53088 359 aa4.16□□□□□ -1.74
PRE4YFR050C YPR109WQ06104 294 aa4.16□□□□□ -1.74
PRE4YFR050C GEA1P47102 1408 aaPredicted RBP4.15□□□□□ -1.74
PRE4YFR050C RAS1P01119 309 aa4.15□□□□□ -1.75
PRE4YFR050C PDR1P12383 1068 aa4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms