RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	CWC15	Q03772	175 aa	Known RBP	3.89	□□□□□ -1.79
YMR31	YFR049W	PUF6	Q04373	656 aa	Known RBP	3.89	□□□□□ -1.79
YMR31	YFR049W	PNP1	Q05788	311 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	FUR4	P05316	633 aa	Known RBP	3.88	□□□□□ -1.79
YMR31	YFR049W	TRL1	P09880	827 aa	Known RBP	3.88	□□□□□ -1.79
YMR31	YFR049W	PDI1	P17967	522 aa	Known RBP	3.88	□□□□□ -1.79
YMR31	YFR049W	NAP1	P25293	417 aa	Known RBP	3.88	□□□□□ -1.79
YMR31	YFR049W	TFG1	P41895	735 aa	Predicted RBP	3.88	□□□□□ -1.79
YMR31	YFR049W	MDJ2	P42834	146 aa		3.88	□□□□□ -1.79
YMR31	YFR049W	STR2	P47164	639 aa		3.88	□□□□□ -1.79
YMR31	YFR049W	FRA1	Q07825	749 aa		3.88	□□□□□ -1.79
YMR31	YFR049W	ALR1	Q08269	859 aa		3.88	□□□□□ -1.79
YMR31	YFR049W	ATE1	P16639	503 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	RTG1	P32607	177 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	GLO3	P38682	493 aa	Known RBP	3.87	□□□□□ -1.79
YMR31	YFR049W	ROM1	P53046	1155 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	AGE1	Q04412	482 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	YPR097W	Q06839	1073 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	IOC2	Q12072	812 aa		3.87	□□□□□ -1.79
YMR31	YFR049W	VAN1	P23642	535 aa		3.86	□□□□□ -1.79
YMR31	YFR049W	BOL3	P39724	118 aa		3.86	□□□□□ -1.79
YMR31	YFR049W	KXD1	P53158	218 aa		3.86	□□□□□ -1.79
YMR31	YFR049W	OYE2	Q03558	400 aa	Known RBP	3.86	□□□□□ -1.79
YMR31	YFR049W	TSC13	Q99190	310 aa		3.86	□□□□□ -1.79
YMR31	YFR049W	SRS2	P12954	1174 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	MIP1	P15801	1254 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	SEC2	P17065	759 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	SEC8	P32855	1065 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	MGE1	P38523	228 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	QDR1	P40475	563 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	ATG1	P53104	897 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	HAP5	Q02516	242 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	IOC4	Q04213	475 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	UTP13	Q05946	817 aa	Known RBP	3.85	□□□□□ -1.79
YMR31	YFR049W	YPR084W	Q06821	456 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	GAS4	Q08271	471 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	LDB19	Q12502	818 aa		3.85	□□□□□ -1.79
YMR31	YFR049W	TY1A-DR4	O74302	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	PDC1	P06169	563 aa	Known RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-H	P0C2I4	478 aa	Known RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-A	P0CX57	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-PR1	P0CX58	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-OR	P0CX59	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-PR2	P0CX60	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-DR5	P0CX65	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-ER2	P0CX66	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-GR3	P0CX67	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-LR1	P0CX68	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-MR2	P0CX69	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	PAT1	P25644	796 aa	Known RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	SEC61	P32915	480 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	PPX1	P38698	397 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	PAC1	P39946	494 aa	Known RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	RRN7	P40992	514 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-JR2	P47099	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-DR1	Q03856	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-ML1	Q04706	440 aa	Known RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	JIP5	Q06214	492 aa	Predicted RBP	3.84	□□□□□ -1.79
YMR31	YFR049W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
YMR31	YFR049W	TY1A-BR	Q12217	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	WHI5	Q12416	295 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-NL2	Q12470	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	TY1A-GR2	Q12485	440 aa		3.84	□□□□□ -1.79
YMR31	YFR049W	YFL034W	P43564	1073 aa		3.83	□□□□□ -1.8
YMR31	YFR049W	ISR1	Q06098	443 aa	Known RBP	3.83	□□□□□ -1.8
YMR31	YFR049W	NUT2	Q06213	157 aa		3.83	□□□□□ -1.8
YMR31	YFR049W	RRP15	Q06511	250 aa	Predicted RBP	3.83	□□□□□ -1.8
YMR31	YFR049W	YDL129W	Q07555	291 aa		3.83	□□□□□ -1.8
YMR31	YFR049W	BUD20	Q08004	166 aa	Predicted RBP	3.83	□□□□□ -1.8
YMR31	YFR049W	NCR1	Q12200	1170 aa		3.83	□□□□□ -1.8
YMR31	YFR049W	TRS33	Q99394	268 aa		3.83	□□□□□ -1.8
YMR31	YFR049W	YTA7	P40340	1379 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	IXR1	P33417	597 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	AIM9	P40053	627 aa	Known RBP	3.82	□□□□□ -1.8
YMR31	YFR049W	HXT10	P43581	546 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	ALD4	P46367	519 aa	Known RBP	3.82	□□□□□ -1.8
YMR31	YFR049W	APL6	P46682	809 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	ACF4	P47129	309 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	CWH41	P53008	833 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	SVF1	Q05515	481 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	FRT1	Q99332	602 aa		3.82	□□□□□ -1.8
YMR31	YFR049W	PRT1	P06103	763 aa	Known RBP	3.81	□□□□□ -1.8
YMR31	YFR049W	NTH2	P35172	780 aa		3.81	□□□□□ -1.8
YMR31	YFR049W	HAL5	P38970	855 aa	Known RBP	3.81	□□□□□ -1.8
YMR31	YFR049W	ELP4	Q02884	456 aa	Known RBP	3.81	□□□□□ -1.8
YMR31	YFR049W	HDA3	Q06623	655 aa		3.81	□□□□□ -1.8
YMR31	YFR049W	VAC17	P25591	423 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	SPT16	P32558	1035 aa	Known RBP	3.8	□□□□□ -1.8
YMR31	YFR049W	MET1	P36150	593 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	SAP30	P38429	201 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	NNF1	P47149	201 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	ARH1	P48360	493 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	ATG20	Q07528	640 aa		3.8	□□□□□ -1.8
YMR31	YFR049W	CYT1	P07143	309 aa		3.79	□□□□□ -1.8
YMR31	YFR049W	MET4	P32389	672 aa		3.79	□□□□□ -1.8
YMR31	YFR049W	BRN1	P38170	754 aa		3.79	□□□□□ -1.8
YMR31	YFR049W	OCA5	P38738	679 aa		3.79	□□□□□ -1.8
YMR31	YFR049W	STB3	Q12427	513 aa		3.79	□□□□□ -1.8
YMR31	YFR049W	KIP2	P28743	706 aa		3.78	□□□□□ -1.8
YMR31	YFR049W	PTC2	P39966	464 aa	Known RBP	3.78	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms