RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	SSA1	P10591	642 aa	Known RBP	4.73	□□□□□ -1.65
UBP5	YER144C	YEL077C	Q3E7X8	1277 aa		4.73	□□□□□ -1.65
UBP5	YER144C	PDR15	Q04182	1529 aa	Known RBP	4.73	□□□□□ -1.65
UBP5	YER144C	GEA2	P39993	1459 aa	Known RBP	4.72	□□□□□ -1.65
UBP5	YER144C	RGA1	P39083	1007 aa		4.72	□□□□□ -1.65
UBP5	YER144C	LTE1	P07866	1435 aa		4.72	□□□□□ -1.65
UBP5	YER144C	KTR1	P27810	393 aa	Known RBP	4.72	□□□□□ -1.65
UBP5	YER144C	KIC1	P38692	1080 aa		4.71	□□□□□ -1.66
UBP5	YER144C	RGA2	Q06407	1009 aa		4.71	□□□□□ -1.66
UBP5	YER144C	ATG32	P40458	529 aa		4.71	□□□□□ -1.66
UBP5	YER144C	PEX21	P50091	288 aa		4.71	□□□□□ -1.66
UBP5	YER144C	IRC20	Q06554	1556 aa		4.7	□□□□□ -1.66
UBP5	YER144C	YRF1-1	P0CX20	1796 aa		4.7	□□□□□ -1.66
UBP5	YER144C	YRF1-5	P0CX21	1796 aa		4.7	□□□□□ -1.66
UBP5	YER144C	YRF1-8	P0CX22	1796 aa		4.7	□□□□□ -1.66
UBP5	YER144C	PDR12	Q02785	1511 aa		4.7	□□□□□ -1.66
UBP5	YER144C	SDH2	P21801	266 aa		4.7	□□□□□ -1.66
UBP5	YER144C	MRF1	P30775	413 aa	Predicted RBP	4.7	□□□□□ -1.66
UBP5	YER144C	VPS15	P22219	1454 aa		4.69	□□□□□ -1.66
UBP5	YER144C	BIM1	P40013	344 aa		4.69	□□□□□ -1.66
UBP5	YER144C	GEA1	P47102	1408 aa	Predicted RBP	4.68	□□□□□ -1.66
UBP5	YER144C	YRR1	Q12172	810 aa		4.68	□□□□□ -1.66
UBP5	YER144C	ERG12	P07277	443 aa		4.67	□□□□□ -1.66
UBP5	YER144C	RTT106	P40161	455 aa		4.67	□□□□□ -1.66
UBP5	YER144C	SEN54	Q02825	467 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP5	YER144C	NOB1	Q08444	459 aa	Known RBP	4.67	□□□□□ -1.66
UBP5	YER144C	CAT8	P39113	1433 aa		4.67	□□□□□ -1.66
UBP5	YER144C	MET10	P39692	1035 aa		4.67	□□□□□ -1.66
UBP5	YER144C	GDB1	Q06625	1536 aa		4.66	□□□□□ -1.66
UBP5	YER144C	PRT1	P06103	763 aa	Known RBP	4.66	□□□□□ -1.66
UBP5	YER144C	PAM1	P37304	830 aa	Known RBP	4.66	□□□□□ -1.66
UBP5	YER144C	BUD20	Q08004	166 aa	Predicted RBP	4.65	□□□□□ -1.66
UBP5	YER144C	SPO14	P36126	1683 aa		4.65	□□□□□ -1.66
UBP5	YER144C	TY3B-G	Q99315	1547 aa		4.65	□□□□□ -1.67
UBP5	YER144C	TIF1	P10081	395 aa	Known RBP	4.63	□□□□□ -1.67
UBP5	YER144C	BIO2	P32451	375 aa		4.63	□□□□□ -1.67
UBP5	YER144C	HGH1	P48362	394 aa	Known RBP	4.63	□□□□□ -1.67
UBP5	YER144C	ATF2	P53296	535 aa		4.63	□□□□□ -1.67
UBP5	YER144C	CSC1	Q06538	782 aa		4.63	□□□□□ -1.67
UBP5	YER144C	TFB4	Q12004	338 aa		4.63	□□□□□ -1.67
UBP5	YER144C	NUD1	P32336	851 aa		4.63	□□□□□ -1.67
UBP5	YER144C	NPL4	P33755	580 aa		4.63	□□□□□ -1.67
UBP5	YER144C	STR2	P47164	639 aa		4.63	□□□□□ -1.67
UBP5	YER144C	TUM1	Q08686	304 aa	Known RBP	4.63	□□□□□ -1.67
UBP5	YER144C	PDR10	P51533	1564 aa		4.63	□□□□□ -1.67
UBP5	YER144C	BUD3	P25558	1636 aa		4.62	□□□□□ -1.67
UBP5	YER144C	NUP170	P38181	1502 aa		4.62	□□□□□ -1.67
UBP5	YER144C	YBT1	P32386	1661 aa		4.62	□□□□□ -1.67
UBP5	YER144C	NUP157	P40064	1391 aa	Known RBP	4.62	□□□□□ -1.67
UBP5	YER144C	ISM1	P48526	1002 aa		4.62	□□□□□ -1.67
UBP5	YER144C	IQG1	Q12280	1495 aa		4.62	□□□□□ -1.67
UBP5	YER144C	TTI1	P36097	1038 aa		4.62	□□□□□ -1.67
UBP5	YER144C	YJL007C	P47080	104 aa		4.62	□□□□□ -1.67
UBP5	YER144C	DRS2	P39524	1355 aa		4.61	□□□□□ -1.67
UBP5	YER144C	IKI3	Q06706	1349 aa	Known RBP	4.61	□□□□□ -1.67
UBP5	YER144C	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
UBP5	YER144C	TRM3	Q07527	1436 aa		4.6	□□□□□ -1.67
UBP5	YER144C	SSF1	P38789	453 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP5	YER144C	BNI1	P41832	1953 aa		4.6	□□□□□ -1.67
UBP5	YER144C	GAP1	P19145	602 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP5	YER144C	CPS1	P27614	576 aa		4.6	□□□□□ -1.67
UBP5	YER144C	PSE1	P32337	1089 aa	Known RBP	4.6	□□□□□ -1.67
UBP5	YER144C	BRL1	P38770	471 aa		4.6	□□□□□ -1.67
UBP5	YER144C	ORC6	P38826	435 aa		4.6	□□□□□ -1.67
UBP5	YER144C	YML083C	Q04526	418 aa		4.6	□□□□□ -1.67
UBP5	YER144C	ARO1	P08566	1588 aa	Known RBP	4.59	□□□□□ -1.67
UBP5	YER144C	GCD11	P32481	527 aa	Known RBP	4.58	□□□□□ -1.68
UBP5	YER144C	SPT16	P32558	1035 aa	Known RBP	4.58	□□□□□ -1.68
UBP5	YER144C	BRE2	P43132	505 aa		4.58	□□□□□ -1.68
UBP5	YER144C	SSA2	P10592	639 aa	Known RBP	4.58	□□□□□ -1.68
UBP5	YER144C	PUP1	P25043	261 aa		4.58	□□□□□ -1.68
UBP5	YER144C	TYW1	Q08960	810 aa	Known RBP	4.58	□□□□□ -1.68
UBP5	YER144C	AIM44	Q99299	758 aa		4.58	□□□□□ -1.68
UBP5	YER144C	SSA4	P22202	642 aa	Known RBP	4.57	□□□□□ -1.68
UBP5	YER144C	CST6	P40535	587 aa		4.57	□□□□□ -1.68
UBP5	YER144C	GCR2	Q01722	534 aa		4.57	□□□□□ -1.68
UBP5	YER144C	DOP1	Q03921	1698 aa		4.57	□□□□□ -1.68
UBP5	YER144C	AIR1	P40507	360 aa	Known RBP	4.57	□□□□□ -1.68
UBP5	YER144C	SUP45	P12385	437 aa	Known RBP	4.56	□□□□□ -1.68
UBP5	YER144C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
UBP5	YER144C	ITT1	Q04638	464 aa		4.56	□□□□□ -1.68
UBP5	YER144C	SRB8	P25648	1427 aa		4.56	□□□□□ -1.68
UBP5	YER144C	RRN6	P32786	894 aa		4.56	□□□□□ -1.68
UBP5	YER144C	YPL062W	Q02781	134 aa		4.56	□□□□□ -1.68
UBP5	YER144C	RRP15	Q06511	250 aa	Predicted RBP	4.56	□□□□□ -1.68
UBP5	YER144C	YSP2	Q06681	1438 aa		4.55	□□□□□ -1.68
UBP5	YER144C	CLA4	P48562	842 aa		4.55	□□□□□ -1.68
UBP5	YER144C	FRK1	Q03002	865 aa	Predicted RBP	4.55	□□□□□ -1.68
UBP5	YER144C	MMS1	Q06211	1407 aa		4.55	□□□□□ -1.68
UBP5	YER144C	GAR1	P28007	205 aa	Known RBP	4.55	□□□□□ -1.68
UBP5	YER144C	MRX10	Q05648	414 aa		4.55	□□□□□ -1.68
UBP5	YER144C	LAM6	Q08001	693 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-DR4	O74302	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-H	P0C2I4	478 aa	Known RBP	4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-A	P0CX57	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-PR1	P0CX58	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-OR	P0CX59	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-PR2	P0CX60	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-DR5	P0CX65	440 aa		4.54	□□□□□ -1.68
UBP5	YER144C	TY1A-ER2	P0CX66	440 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms