RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W TY1A-MR1Q04215 440 aa5.36□□□□□ -1.55
YCK3YER123W IES2P40154 320 aa5.35□□□□□ -1.55
YCK3YER123W OSH7P38755 437 aa5.34□□□□□ -1.55
YCK3YER123W LYS5P50113 272 aa5.34□□□□□ -1.55
YCK3YER123W TCB1Q12466 1186 aa5.34□□□□□ -1.55
YCK3YER123W YBL086CP38177 466 aa5.33□□□□□ -1.56
YCK3YER123W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
YCK3YER123W DLD1P32891 587 aa5.33□□□□□ -1.56
YCK3YER123W TRM1P15565 570 aaKnown RBP5.32□□□□□ -1.56
YCK3YER123W NRD1P53617 575 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56 RIP-Chip
YCK3YER123W MDJ1P35191 511 aa5.31□□□□□ -1.56
YCK3YER123W DSF2P38213 736 aa5.31□□□□□ -1.56
YCK3YER123W CCP1P00431 361 aa5.3□□□□□ -1.56
YCK3YER123W JJJ3P47138 172 aa5.3□□□□□ -1.56
YCK3YER123W NUP42P49686 430 aaKnown RBP5.3□□□□□ -1.56
YCK3YER123W VAC17P25591 423 aa5.29□□□□□ -1.56
YCK3YER123W NSG2P53898 299 aa5.29□□□□□ -1.56
YCK3YER123W HST2P53686 357 aa5.27□□□□□ -1.57
YCK3YER123W SCJ1P25303 377 aa5.25□□□□□ -1.57
YCK3YER123W EMW1P42842 904 aaKnown RBP5.25□□□□□ -1.57
YCK3YER123W APP1P53933 587 aa5.25□□□□□ -1.57
YCK3YER123W CCT8P47079 568 aaKnown RBP5.24□□□□□ -1.57
YCK3YER123W THI72Q08579 599 aa5.24□□□□□ -1.57
YCK3YER123W AI1P03875 834 aa5.23□□□□□ -1.57
YCK3YER123W MMP1Q12372 583 aa5.23□□□□□ -1.57
YCK3YER123W DIT2P21595 489 aa5.22□□□□□ -1.57
YCK3YER123W YFL066CP43538 392 aa5.21□□□□□ -1.58
YCK3YER123W GLN1P32288 370 aaKnown RBP5.2□□□□□ -1.58
YCK3YER123W NAM8Q00539 523 aaKnown RBP5.2□□□□□ -1.58
YCK3YER123W CDC19P00549 500 aaKnown RBP5.19□□□□□ -1.58
YCK3YER123W MKS1P34072 584 aa5.18□□□□□ -1.58
YCK3YER123W ITT1Q04638 464 aa5.18□□□□□ -1.58
YCK3YER123W SBP1P10080 294 aaKnown RBP5.17□□□□□ -1.58
YCK3YER123W DFG5Q05031 458 aa5.17□□□□□ -1.58
YCK3YER123W ESS1P22696 170 aa5.16□□□□□ -1.58
YCK3YER123W YPR053CQ6Q5F3 151 aa5.16□□□□□ -1.58
YCK3YER123W BDS1Q08347 646 aa5.16□□□□□ -1.58
YCK3YER123W VTC4P47075 721 aa5.15□□□□□ -1.59
YCK3YER123W CUZ1P53899 274 aa5.15□□□□□ -1.59
YCK3YER123W CEM1P39525 442 aa5.14□□□□□ -1.59
YCK3YER123W SPB4P25808 606 aaPredicted RBP5.13□□□□□ -1.59
YCK3YER123W YJU3P28321 313 aa5.12□□□□□ -1.59
YCK3YER123W RSC30P38781 883 aa5.12□□□□□ -1.59
YCK3YER123W FBP26P32604 452 aa5.11□□□□□ -1.59
YCK3YER123W SKN7P38889 622 aa5.11□□□□□ -1.59
YCK3YER123W ADE12P80210 433 aaKnown RBP5.11□□□□□ -1.59
YCK3YER123W FIG4P42837 879 aa5.1□□□□□ -1.59
YCK3YER123W STE6P12866 1290 aa5.09□□□□□ -1.59
YCK3YER123W DAL1P32375 460 aa5.09□□□□□ -1.59
YCK3YER123W YMR187CQ03236 431 aa5.09□□□□□ -1.59
YCK3YER123W ATF2P53296 535 aa5.08□□□□□ -1.6
YCK3YER123W SAS10Q12136 610 aaPredicted RBP5.08□□□□□ -1.6
YCK3YER123W TDA6Q06466 467 aa5.08□□□□□ -1.6
YCK3YER123W SYT1Q06836 1226 aa5.07□□□□□ -1.6
YCK3YER123W YMR265CQ03508 461 aaKnown RBP5.06□□□□□ -1.6
YCK3YER123W DIT1P21623 536 aa5.05□□□□□ -1.6
YCK3YER123W SBE2P42223 864 aaKnown RBP5.05□□□□□ -1.6
YCK3YER123W ARG8P18544 423 aa5.04□□□□□ -1.6
YCK3YER123W PKH3Q03306 898 aaPredicted RBP5.04□□□□□ -1.6
YCK3YER123W RPP2BP02400 110 aaKnown RBP5.04□□□□□ -1.6
YCK3YER123W TEC1P18412 486 aa5.04□□□□□ -1.6
YCK3YER123W UBP15P50101 1230 aa5.04□□□□□ -1.6
YCK3YER123W DLD3P39976 496 aaKnown RBP5.03□□□□□ -1.6
YCK3YER123W YDR461C-AQ2V2P7 80 aa5.03□□□□□ -1.6
YCK3YER123W KRE33P53914 1056 aaKnown RBP5.02□□□□□ -1.61
YCK3YER123W ISU1Q03020 165 aa5.02□□□□□ -1.61
YCK3YER123W MCX1P38323 520 aaPredicted RBP5.01□□□□□ -1.61
YCK3YER123W YNR014WP53719 212 aa5.01□□□□□ -1.61
YCK3YER123W YPR084WQ06821 456 aa4.99□□□□□ -1.61
YCK3YER123W KTR1P27810 393 aaKnown RBP4.99□□□□□ -1.61
YCK3YER123W ATG20Q07528 640 aa4.99□□□□□ -1.61
YCK3YER123W MSN5P52918 1224 aa4.98□□□□□ -1.61
YCK3YER123W YCK2P23292 546 aaKnown RBP4.96□□□□□ -1.62
YCK3YER123W GUT2P32191 649 aa4.95□□□□□ -1.62
YCK3YER123W SLA1P32790 1244 aa4.95□□□□□ -1.62
YCK3YER123W BOI2P39969 1040 aa4.95□□□□□ -1.62
YCK3YER123W GPM1P00950 247 aaKnown RBP4.94□□□□□ -1.62
YCK3YER123W AMN1P38285 549 aaPredicted RBP4.94□□□□□ -1.62
YCK3YER123W SSN3P39073 555 aa4.94□□□□□ -1.62
YCK3YER123W YDR215CQ12240 137 aa4.94□□□□□ -1.62
YCK3YER123W AHP1P38013 176 aaKnown RBP4.93□□□□□ -1.62
YCK3YER123W YNR021WP53723 404 aaKnown RBP4.93□□□□□ -1.62
YCK3YER123W GLT1Q12680 2145 aaKnown RBP4.93□□□□□ -1.62
YCK3YER123W GLC3P32775 704 aa4.92□□□□□ -1.62
YCK3YER123W RAD59Q12223 238 aa4.92□□□□□ -1.62
YCK3YER123W MET1P36150 593 aa4.91□□□□□ -1.62
YCK3YER123W LSB6P42951 607 aa4.91□□□□□ -1.62
YCK3YER123W CSN12P47130 423 aa4.91□□□□□ -1.62
YCK3YER123W TY1A-DR3Q12441 440 aa4.91□□□□□ -1.62
YCK3YER123W FPS1P23900 669 aa4.91□□□□□ -1.62
YCK3YER123W MAC1P35192 417 aa4.91□□□□□ -1.62
YCK3YER123W SLN1P39928 1220 aaPredicted RBP4.91□□□□□ -1.62
YCK3YER123W WTM2Q12206 467 aa4.91□□□□□ -1.62
YCK3YER123W TAT1P38085 619 aa4.89□□□□□ -1.63
YCK3YER123W STE20Q03497 939 aaKnown RBP4.89□□□□□ -1.63
YCK3YER123W MCA1Q08601 432 aa4.89□□□□□ -1.63
YCK3YER123W FRA1Q07825 749 aa4.88□□□□□ -1.63
YCK3YER123W MAK16P10962 306 aaPredicted RBP4.87□□□□□ -1.63
YCK3YER123W DAT1P13483 248 aaKnown RBP4.87□□□□□ -1.63
YCK3YER123W NAF1P53919 492 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms