RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	ALD2	P47771	506 aa		4.84	□□□□□ -1.63
IRC3	YDR332W	RPA14	P50106	137 aa		4.84	□□□□□ -1.63
IRC3	YDR332W	ROM1	P53046	1155 aa		4.84	□□□□□ -1.63
IRC3	YDR332W	BUD20	Q08004	166 aa	Predicted RBP	4.84	□□□□□ -1.63
IRC3	YDR332W	YEL077C	Q3E7X8	1277 aa		4.84	□□□□□ -1.63
IRC3	YDR332W	SEC61	P32915	480 aa		4.84	□□□□□ -1.64
IRC3	YDR332W	ACS2	P52910	683 aa	Known RBP	4.84	□□□□□ -1.64
IRC3	YDR332W	TBF1	Q02457	562 aa		4.84	□□□□□ -1.64
IRC3	YDR332W	ATE1	P16639	503 aa		4.83	□□□□□ -1.64
IRC3	YDR332W	RTG1	P32607	177 aa		4.83	□□□□□ -1.64
IRC3	YDR332W	SPP1	Q03012	353 aa		4.83	□□□□□ -1.64
IRC3	YDR332W	PHO87	P25360	923 aa		4.82	□□□□□ -1.64
IRC3	YDR332W	TEC1	P18412	486 aa		4.82	□□□□□ -1.64
IRC3	YDR332W	GCD11	P32481	527 aa	Known RBP	4.82	□□□□□ -1.64
IRC3	YDR332W	MET10	P39692	1035 aa		4.82	□□□□□ -1.64
IRC3	YDR332W	PAC1	P39946	494 aa	Known RBP	4.82	□□□□□ -1.64
IRC3	YDR332W	STE20	Q03497	939 aa	Known RBP	4.82	□□□□□ -1.64
IRC3	YDR332W	PDC1	P06169	563 aa	Known RBP	4.81	□□□□□ -1.64
IRC3	YDR332W	NPL4	P33755	580 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	YHL050C	P38721	697 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	BOL3	P39724	118 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	KAR5	Q04746	504 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	WHI5	Q12416	295 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	LDB19	Q12502	818 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	AIM44	Q99299	758 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	GUT2	P32191	649 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	SOH1	P38633	127 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	HAP5	Q02516	242 aa		4.81	□□□□□ -1.64
IRC3	YDR332W	PUF6	Q04373	656 aa	Known RBP	4.81	□□□□□ -1.64
IRC3	YDR332W	PNP1	Q05788	311 aa		4.8	□□□□□ -1.64
IRC3	YDR332W	UTP13	Q05946	817 aa	Known RBP	4.8	□□□□□ -1.64
IRC3	YDR332W	YPR015C	Q12531	247 aa		4.8	□□□□□ -1.64
IRC3	YDR332W	SEC20	P28791	383 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	HAL5	P38970	855 aa	Known RBP	4.79	□□□□□ -1.64
IRC3	YDR332W	ARH1	P48360	493 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	YDL129W	Q07555	291 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	HAP4	P14064	554 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	ALR1	Q08269	859 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	TSC13	Q99190	310 aa		4.79	□□□□□ -1.64
IRC3	YDR332W	GRS1	P38088	690 aa	Known RBP	4.78	□□□□□ -1.64
IRC3	YDR332W	NCR1	Q12200	1170 aa		4.78	□□□□□ -1.64
IRC3	YDR332W	PDI1	P17967	522 aa	Known RBP	4.77	□□□□□ -1.65
IRC3	YDR332W	VAC17	P25591	423 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	SUV3	P32580	737 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	ATG1	P53104	897 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	ITT1	Q04638	464 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	PPX1	P38698	397 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	FRT1	Q99332	602 aa		4.77	□□□□□ -1.65
IRC3	YDR332W	SRS2	P12954	1174 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	IXR1	P33417	597 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	HXT10	P43581	546 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	POL32	P47110	350 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
IRC3	YDR332W	STB3	Q12427	513 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	BNI4	P53858	892 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	PUN1	Q06991	263 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	GAS4	Q08271	471 aa		4.76	□□□□□ -1.65
IRC3	YDR332W	MOD5	P07884	428 aa		4.75	□□□□□ -1.65
IRC3	YDR332W	TPD3	P31383	635 aa		4.75	□□□□□ -1.65
IRC3	YDR332W	ASF1	P32447	279 aa		4.75	□□□□□ -1.65
IRC3	YDR332W	ATG3	P40344	310 aa		4.75	□□□□□ -1.65
IRC3	YDR332W	NUT2	Q06213	157 aa		4.75	□□□□□ -1.65
IRC3	YDR332W	MET4	P32389	672 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	SEC8	P32855	1065 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	RRN7	P40992	514 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	ACF4	P47129	309 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	PRT1	P06103	763 aa	Known RBP	4.74	□□□□□ -1.65
IRC3	YDR332W	BOI1	P38041	980 aa	Known RBP	4.74	□□□□□ -1.65
IRC3	YDR332W	OCA5	P38738	679 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	QDR1	P40475	563 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	HDA3	Q06623	655 aa		4.74	□□□□□ -1.65
IRC3	YDR332W	ALD4	P46367	519 aa	Known RBP	4.73	□□□□□ -1.65
IRC3	YDR332W	KXD1	P53158	218 aa		4.73	□□□□□ -1.65
IRC3	YDR332W	ISR1	Q06098	443 aa	Known RBP	4.73	□□□□□ -1.65
IRC3	YDR332W	LSO1	Q3E827	93 aa		4.73	□□□□□ -1.65
IRC3	YDR332W	SAP30	P38429	201 aa		4.73	□□□□□ -1.65
IRC3	YDR332W	GPI13	Q07830	1017 aa		4.73	□□□□□ -1.65
IRC3	YDR332W	FUR4	P05316	633 aa	Known RBP	4.72	□□□□□ -1.65
IRC3	YDR332W	NAP1	P25293	417 aa	Known RBP	4.72	□□□□□ -1.65
IRC3	YDR332W	GLO3	P38682	493 aa	Known RBP	4.72	□□□□□ -1.65
IRC3	YDR332W	YJR107W	P47145	328 aa		4.72	□□□□□ -1.65
IRC3	YDR332W	IOC4	Q04213	475 aa		4.72	□□□□□ -1.65
IRC3	YDR332W	MIP1	P15801	1254 aa		4.71	□□□□□ -1.65
IRC3	YDR332W	VAN1	P23642	535 aa		4.71	□□□□□ -1.65
IRC3	YDR332W	AIM9	P40053	627 aa	Known RBP	4.71	□□□□□ -1.65
IRC3	YDR332W	RRD1	P40454	393 aa	Known RBP	4.71	□□□□□ -1.65
IRC3	YDR332W	TFG1	P41895	735 aa	Predicted RBP	4.71	□□□□□ -1.65
IRC3	YDR332W	OYE2	Q03558	400 aa	Known RBP	4.71	□□□□□ -1.65
IRC3	YDR332W	NTH2	P35172	780 aa		4.71	□□□□□ -1.66
IRC3	YDR332W	ELP4	Q02884	456 aa	Known RBP	4.71	□□□□□ -1.66
IRC3	YDR332W	MAG2	Q06436	670 aa	Known RBP	4.71	□□□□□ -1.66
IRC3	YDR332W	UBP1	P25037	809 aa		4.7	□□□□□ -1.66
IRC3	YDR332W	MNL2	Q12205	849 aa		4.7	□□□□□ -1.66
IRC3	YDR332W	THI12	P42883	340 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	THI5	P43534	340 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	THI11	P47183	340 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	YML082W	Q04533	649 aa	Known RBP	4.69	□□□□□ -1.66
IRC3	YDR332W	ATG20	Q07528	640 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	THI13	Q07748	340 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms