RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W TY1A-DR5P0CX65 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-ER2P0CX66 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-GR3P0CX67 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-LR1P0CX68 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-MR2P0CX69 440 aa5.82□□□□□ -1.48
HPR1YDR138W RPP1BP10622 106 aaKnown RBP5.82□□□□□ -1.48
HPR1YDR138W NUD1P32336 851 aa5.82□□□□□ -1.48
HPR1YDR138W CST6P40535 587 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-JR2P47099 440 aa5.82□□□□□ -1.48
HPR1YDR138W STR2P47164 639 aa5.82□□□□□ -1.48
HPR1YDR138W FAR11P53917 953 aa5.82□□□□□ -1.48
HPR1YDR138W DOS2P54858 310 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-DR1Q03856 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-ML1Q04706 440 aaKnown RBP5.82□□□□□ -1.48
HPR1YDR138W ENV9Q08651 330 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-BRQ12217 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-NL2Q12470 440 aa5.82□□□□□ -1.48
HPR1YDR138W TY1A-GR2Q12485 440 aa5.82□□□□□ -1.48
HPR1YDR138W PDR1P12383 1068 aa5.81□□□□□ -1.48
HPR1YDR138W SUV3P32580 737 aa5.81□□□□□ -1.48
HPR1YDR138W GPI13Q07830 1017 aa5.81□□□□□ -1.48
HPR1YDR138W BRN1P38170 754 aa5.81□□□□□ -1.48
HPR1YDR138W MET1P36150 593 aa5.8□□□□□ -1.48
HPR1YDR138W FYV10P40492 516 aa5.8□□□□□ -1.48
HPR1YDR138W ATG36P46983 293 aa5.8□□□□□ -1.48
HPR1YDR138W BOI1P38041 980 aaKnown RBP5.79□□□□□ -1.48
HPR1YDR138W HAL5P38970 855 aaKnown RBP5.79□□□□□ -1.48
HPR1YDR138W QDR1P40475 563 aa5.79□□□□□ -1.48
HPR1YDR138W ISM1P48526 1002 aa5.79□□□□□ -1.48
HPR1YDR138W MNL2Q12205 849 aa5.79□□□□□ -1.48
HPR1YDR138W SOH1P38633 127 aa5.78□□□□□ -1.48
HPR1YDR138W NMA111P53920 997 aa5.78□□□□□ -1.48
HPR1YDR138W PML39Q03760 334 aa5.78□□□□□ -1.48
HPR1YDR138W THI12P42883 340 aa5.77□□□□□ -1.49
HPR1YDR138W THI5P43534 340 aa5.77□□□□□ -1.49
HPR1YDR138W THI11P47183 340 aa5.77□□□□□ -1.49
HPR1YDR138W THI13Q07748 340 aa5.77□□□□□ -1.49
HPR1YDR138W ISU2Q12056 156 aa5.77□□□□□ -1.49
HPR1YDR138W GLO3P38682 493 aaKnown RBP5.77□□□□□ -1.49
HPR1YDR138W ALD3P54114 506 aa5.77□□□□□ -1.49
HPR1YDR138W SVF1Q05515 481 aa5.77□□□□□ -1.49
HPR1YDR138W JIP5Q06214 492 aaPredicted RBP5.77□□□□□ -1.49
HPR1YDR138W SRS2P12954 1174 aa5.76□□□□□ -1.49
HPR1YDR138W HAP4P14064 554 aa5.76□□□□□ -1.49
HPR1YDR138W PDI1P17967 522 aaKnown RBP5.76□□□□□ -1.49
HPR1YDR138W TEC1P18412 486 aa5.76□□□□□ -1.49
HPR1YDR138W PEX29Q03370 554 aa5.76□□□□□ -1.49
HPR1YDR138W PUN1Q06991 263 aa5.76□□□□□ -1.49
HPR1YDR138W TSC13Q99190 310 aa5.76□□□□□ -1.49
HPR1YDR138W IOC3P43596 787 aa5.76□□□□□ -1.49
HPR1YDR138W ACF4P47129 309 aa5.76□□□□□ -1.49
HPR1YDR138W STE20Q03497 939 aaKnown RBP5.76□□□□□ -1.49
HPR1YDR138W YPR097WQ06839 1073 aa5.76□□□□□ -1.49
HPR1YDR138W WSC3Q12215 556 aa5.76□□□□□ -1.49
HPR1YDR138W KTR2P33550 425 aa5.75□□□□□ -1.49
HPR1YDR138W NNF1P47149 201 aa5.75□□□□□ -1.49
HPR1YDR138W SPR28Q04921 423 aa5.75□□□□□ -1.49
HPR1YDR138W YDR344CQ05510 147 aa5.75□□□□□ -1.49
HPR1YDR138W RPA14P50106 137 aa5.74□□□□□ -1.49
HPR1YDR138W TBF1Q02457 562 aa5.74□□□□□ -1.49
HPR1YDR138W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
HPR1YDR138W PAC1P39946 494 aaKnown RBP5.74□□□□□ -1.49
HPR1YDR138W UTP13Q05946 817 aaKnown RBP5.74□□□□□ -1.49
HPR1YDR138W FUR4P05316 633 aaKnown RBP5.73□□□□□ -1.49
HPR1YDR138W MCM2P29469 868 aa5.73□□□□□ -1.49
HPR1YDR138W JIP4Q03361 876 aa5.73□□□□□ -1.49
HPR1YDR138W GAS4Q08271 471 aa5.73□□□□□ -1.49
HPR1YDR138W YOL098CQ12496 1037 aa5.73□□□□□ -1.49
HPR1YDR138W LSO1Q3E827 93 aa5.73□□□□□ -1.49
HPR1YDR138W PDC1P06169 563 aaKnown RBP5.73□□□□□ -1.49
HPR1YDR138W VAC8P39968 578 aa5.73□□□□□ -1.49
HPR1YDR138W YAF9P53930 226 aa5.73□□□□□ -1.49
HPR1YDR138W RAM1P22007 431 aa5.72□□□□□ -1.49
HPR1YDR138W GUT2P32191 649 aa5.72□□□□□ -1.49
HPR1YDR138W RNH70P53331 553 aa5.72□□□□□ -1.49
HPR1YDR138W FPR4Q06205 392 aaPredicted RBP5.72□□□□□ -1.49
HPR1YDR138W TOS4Q06266 489 aa5.72□□□□□ -1.49
HPR1YDR138W PHO4P07270 312 aaKnown RBP5.72□□□□□ -1.49
HPR1YDR138W IXR1P33417 597 aa5.72□□□□□ -1.49
HPR1YDR138W IOC2Q12072 812 aa5.71□□□□□ -1.5
HPR1YDR138W CIT2P08679 460 aa5.71□□□□□ -1.5
HPR1YDR138W ALD6P54115 500 aaKnown RBP5.71□□□□□ -1.5
HPR1YDR138W BUD20Q08004 166 aaPredicted RBP5.71□□□□□ -1.5
HPR1YDR138W DAK2P43550 591 aa5.7□□□□□ -1.5
HPR1YDR138W VPS16Q03308 798 aa5.7□□□□□ -1.5
HPR1YDR138W MIP1P15801 1254 aa5.69□□□□□ -1.5
HPR1YDR138W BUD31P25337 157 aaPredicted RBP5.69□□□□□ -1.5
HPR1YDR138W EAP1P36041 632 aaKnown RBP5.69□□□□□ -1.5
HPR1YDR138W NMD2P38798 1089 aaKnown RBP5.69□□□□□ -1.5
HPR1YDR138W MTO1P53070 669 aa5.69□□□□□ -1.5
HPR1YDR138W RPB10P22139 70 aa5.68□□□□□ -1.5
HPR1YDR138W VAC17P25591 423 aa5.68□□□□□ -1.5
HPR1YDR138W MGE1P38523 228 aa5.68□□□□□ -1.5
HPR1YDR138W AIM9P40053 627 aaKnown RBP5.68□□□□□ -1.5
HPR1YDR138W TRS120Q04183 1289 aa5.68□□□□□ -1.5
HPR1YDR138W ISR1Q06098 443 aaKnown RBP5.68□□□□□ -1.5
HPR1YDR138W HDA3Q06623 655 aa5.68□□□□□ -1.5
HPR1YDR138W YBL029C-AQ3E756 94 aa5.68□□□□□ -1.5
HPR1YDR138W RPT1P33299 467 aaKnown RBP5.68□□□□□ -1.5
HPR1YDR138W TAT2P38967 592 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 94.1 ms