RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	NIS1	P53939	407 aa		4.74	□□□□□ -1.65
YDR048C	YDR048C	SPB4	P25808	606 aa	Predicted RBP	4.73	□□□□□ -1.65
YDR048C	YDR048C	LSC2	P53312	427 aa		4.73	□□□□□ -1.65
YDR048C	YDR048C	OSH7	P38755	437 aa		4.7	□□□□□ -1.66
YDR048C	YDR048C	FPK1	P53739	893 aa		4.69	□□□□□ -1.66
YDR048C	YDR048C	HXT10	P43581	546 aa		4.68	□□□□□ -1.66
YDR048C	YDR048C	KXD1	P53158	218 aa		4.68	□□□□□ -1.66
YDR048C	YDR048C	PDC1	P06169	563 aa	Known RBP	4.67	□□□□□ -1.66
YDR048C	YDR048C	HST2	P53686	357 aa		4.67	□□□□□ -1.66
YDR048C	YDR048C	TCB1	Q12466	1186 aa		4.67	□□□□□ -1.66
YDR048C	YDR048C	SLY41	P22215	453 aa		4.66	□□□□□ -1.66
YDR048C	YDR048C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
YDR048C	YDR048C	YJR098C	P47139	656 aa		4.66	□□□□□ -1.66
YDR048C	YDR048C	YPL034W	Q03083	165 aa		4.66	□□□□□ -1.66
YDR048C	YDR048C	RPA14	P50106	137 aa		4.65	□□□□□ -1.67
YDR048C	YDR048C	PUS6	P53294	404 aa		4.65	□□□□□ -1.67
YDR048C	YDR048C	YNR021W	P53723	404 aa	Known RBP	4.65	□□□□□ -1.67
YDR048C	YDR048C	YMR196W	Q04336	1088 aa		4.65	□□□□□ -1.67
YDR048C	YDR048C	YPR097W	Q06839	1073 aa		4.65	□□□□□ -1.67
YDR048C	YDR048C	MRT4	P33201	236 aa	Known RBP	4.64	□□□□□ -1.67
YDR048C	YDR048C	RTT106	P40161	455 aa		4.64	□□□□□ -1.67
YDR048C	YDR048C	YMR187C	Q03236	431 aa		4.64	□□□□□ -1.67
YDR048C	YDR048C	GLT1	Q12680	2145 aa	Known RBP	4.63	□□□□□ -1.67
YDR048C	YDR048C	AAD14	P42884	376 aa		4.63	□□□□□ -1.67
YDR048C	YDR048C	ALR1	Q08269	859 aa		4.63	□□□□□ -1.67
YDR048C	YDR048C	TDA6	Q06466	467 aa		4.62	□□□□□ -1.67
YDR048C	YDR048C	YDL206W	Q12424	762 aa		4.62	□□□□□ -1.67
YDR048C	YDR048C	ARG82	P07250	355 aa		4.61	□□□□□ -1.67
YDR048C	YDR048C	TRM1	P15565	570 aa	Known RBP	4.61	□□□□□ -1.67
YDR048C	YDR048C	SCJ1	P25303	377 aa		4.61	□□□□□ -1.67
YDR048C	YDR048C	MAC1	P35192	417 aa		4.61	□□□□□ -1.67
YDR048C	YDR048C	MMP1	Q12372	583 aa		4.61	□□□□□ -1.67
YDR048C	YDR048C	GLN1	P32288	370 aa	Known RBP	4.6	□□□□□ -1.67
YDR048C	YDR048C	DLD1	P32891	587 aa		4.6	□□□□□ -1.67
YDR048C	YDR048C	ATF2	P53296	535 aa		4.6	□□□□□ -1.67
YDR048C	YDR048C	TBF1	Q02457	562 aa		4.6	□□□□□ -1.67
YDR048C	YDR048C	GLC3	P32775	704 aa		4.58	□□□□□ -1.68
YDR048C	YDR048C	SBE2	P42223	864 aa	Known RBP	4.58	□□□□□ -1.68
YDR048C	YDR048C	AIM7	Q12156	149 aa		4.58	□□□□□ -1.68
YDR048C	YDR048C	RSC30	P38781	883 aa		4.57	□□□□□ -1.68
YDR048C	YDR048C	ESS1	P22696	170 aa		4.56	□□□□□ -1.68
YDR048C	YDR048C	IXR1	P33417	597 aa		4.56	□□□□□ -1.68
YDR048C	YDR048C	VAC17	P25591	423 aa		4.55	□□□□□ -1.68
YDR048C	YDR048C	YJU3	P28321	313 aa		4.55	□□□□□ -1.68
YDR048C	YDR048C	KIP2	P28743	706 aa		4.55	□□□□□ -1.68
YDR048C	YDR048C	AMN1	P38285	549 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR048C	YDR048C	NAM8	Q00539	523 aa	Known RBP	4.55	□□□□□ -1.68
YDR048C	YDR048C	KTR1	P27810	393 aa	Known RBP	4.54	□□□□□ -1.68
YDR048C	YDR048C	YCK2	P23292	546 aa	Known RBP	4.52	□□□□□ -1.69
YDR048C	YDR048C	YBL086C	P38177	466 aa		4.5	□□□□□ -1.69
YDR048C	YDR048C	PKH3	Q03306	898 aa	Predicted RBP	4.5	□□□□□ -1.69
YDR048C	YDR048C	EMW1	P42842	904 aa	Known RBP	4.49	□□□□□ -1.69
YDR048C	YDR048C	CSN12	P47130	423 aa		4.49	□□□□□ -1.69
YDR048C	YDR048C	RQC2	Q12532	1038 aa	Known RBP	4.49	□□□□□ -1.69
YDR048C	YDR048C	ARG8	P18544	423 aa		4.47	□□□□□ -1.69
YDR048C	YDR048C	MCX1	P38323	520 aa	Predicted RBP	4.47	□□□□□ -1.69
YDR048C	YDR048C	FIG4	P42837	879 aa		4.47	□□□□□ -1.69
YDR048C	YDR048C	CUZ1	P53899	274 aa		4.47	□□□□□ -1.69
YDR048C	YDR048C	ADE12	P80210	433 aa	Known RBP	4.47	□□□□□ -1.69
YDR048C	YDR048C	CDC19	P00549	500 aa	Known RBP	4.46	□□□□□ -1.7
YDR048C	YDR048C	MCA1	Q08601	432 aa		4.46	□□□□□ -1.7
YDR048C	YDR048C	RAD59	Q12223	238 aa		4.46	□□□□□ -1.7
YDR048C	YDR048C	CEM1	P39525	442 aa		4.45	□□□□□ -1.7
YDR048C	YDR048C	LSB6	P42951	607 aa		4.45	□□□□□ -1.7
YDR048C	YDR048C	LEU3	P08638	886 aa		4.44	□□□□□ -1.7
YDR048C	YDR048C	YPR084W	Q06821	456 aa		4.44	□□□□□ -1.7
YDR048C	YDR048C	YDR215C	Q12240	137 aa		4.44	□□□□□ -1.7
YDR048C	YDR048C	SSA2	P10592	639 aa	Known RBP	4.43	□□□□□ -1.7
YDR048C	YDR048C	APP1	P53933	587 aa		4.43	□□□□□ -1.7
YDR048C	YDR048C	GIS1	Q03833	894 aa		4.43	□□□□□ -1.7
YDR048C	YDR048C	MAK16	P10962	306 aa	Predicted RBP	4.42	□□□□□ -1.7
YDR048C	YDR048C	TEC1	P18412	486 aa		4.42	□□□□□ -1.7
YDR048C	YDR048C	SLN1	P39928	1220 aa	Predicted RBP	4.42	□□□□□ -1.7
YDR048C	YDR048C	ALO1	P54783	526 aa	Known RBP	4.42	□□□□□ -1.7
YDR048C	YDR048C	ITT1	Q04638	464 aa		4.42	□□□□□ -1.7
YDR048C	YDR048C	KIN1	P13185	1064 aa		4.41	□□□□□ -1.7
YDR048C	YDR048C	YNR014W	P53719	212 aa		4.41	□□□□□ -1.7
YDR048C	YDR048C	NAF1	P53919	492 aa	Known RBP	4.41	□□□□□ -1.7
YDR048C	YDR048C	MKS1	P34072	584 aa		4.4	□□□□□ -1.71
YDR048C	YDR048C	STE6	P12866	1290 aa		4.39	□□□□□ -1.71
YDR048C	YDR048C	FBP26	P32604	452 aa		4.39	□□□□□ -1.71
YDR048C	YDR048C	INP52	P50942	1183 aa		4.39	□□□□□ -1.71
YDR048C	YDR048C	DFG5	Q05031	458 aa		4.39	□□□□□ -1.71
YDR048C	YDR048C	GUT2	P32191	649 aa		4.38	□□□□□ -1.71
YDR048C	YDR048C	AVT1	P47082	602 aa		4.38	□□□□□ -1.71
YDR048C	YDR048C	VTC4	P47075	721 aa		4.37	□□□□□ -1.71
YDR048C	YDR048C	FRA1	Q07825	749 aa		4.37	□□□□□ -1.71
YDR048C	YDR048C	CSE4	P36012	229 aa		4.36	□□□□□ -1.71
YDR048C	YDR048C	OMA1	P36163	345 aa		4.36	□□□□□ -1.71
YDR048C	YDR048C	RPN1	P38764	993 aa	Known RBP	4.36	□□□□□ -1.71
YDR048C	YDR048C	SYT1	Q06836	1226 aa		4.36	□□□□□ -1.71
YDR048C	YDR048C	BDS1	Q08347	646 aa		4.36	□□□□□ -1.71
YDR048C	YDR048C	ISU1	Q03020	165 aa		4.35	□□□□□ -1.71
YDR048C	YDR048C	GUA1	P38625	525 aa	Known RBP	4.34	□□□□□ -1.71
YDR048C	YDR048C	HPC2	Q01448	625 aa		4.34	□□□□□ -1.71
YDR048C	YDR048C	STE20	Q03497	939 aa	Known RBP	4.34	□□□□□ -1.71
YDR048C	YDR048C	APL6	P46682	809 aa		4.33	□□□□□ -1.72
YDR048C	YDR048C	MRX12	P47084	519 aa		4.33	□□□□□ -1.72
YDR048C	YDR048C	ATG20	Q07528	640 aa		4.33	□□□□□ -1.72
YDR048C	YDR048C	SPT5	P27692	1063 aa	Known RBP	4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms