RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W RDS2P19541 446 aaKnown RBP6.55□□□□□ -1.36
UBC9YDL064W TPD3P31383 635 aa6.54□□□□□ -1.36
UBC9YDL064W RRD1P40454 393 aaKnown RBP6.54□□□□□ -1.36
UBC9YDL064W PUS5Q06244 254 aa6.54□□□□□ -1.36
UBC9YDL064W CST6P40535 587 aa6.53□□□□□ -1.36
UBC9YDL064W VAC17P25591 423 aa6.52□□□□□ -1.37
UBC9YDL064W MRF1P30775 413 aaPredicted RBP6.52□□□□□ -1.37
UBC9YDL064W GUT2P32191 649 aa6.52□□□□□ -1.37
UBC9YDL064W BDP1P46678 594 aa6.52□□□□□ -1.37
UBC9YDL064W FRK1Q03002 865 aaPredicted RBP6.51□□□□□ -1.37
UBC9YDL064W STE20Q03497 939 aaKnown RBP6.51□□□□□ -1.37
UBC9YDL064W SSA4P22202 642 aaKnown RBP6.5□□□□□ -1.37
UBC9YDL064W PEP12P32854 288 aa6.5□□□□□ -1.37
UBC9YDL064W YPP1P46951 817 aa6.5□□□□□ -1.37
UBC9YDL064W FRA1Q07825 749 aa6.5□□□□□ -1.37
UBC9YDL064W NOB1Q08444 459 aaKnown RBP6.5□□□□□ -1.37
UBC9YDL064W XDJ1P39102 459 aa6.49□□□□□ -1.37
UBC9YDL064W KTR7P40504 517 aa6.49□□□□□ -1.37
UBC9YDL064W PUP1P25043 261 aa6.48□□□□□ -1.37
UBC9YDL064W YML083CQ04526 418 aa6.48□□□□□ -1.37
UBC9YDL064W ENV9Q08651 330 aa6.48□□□□□ -1.37
UBC9YDL064W TGL4P36165 910 aa6.47□□□□□ -1.37
UBC9YDL064W APL6P46682 809 aa6.46□□□□□ -1.38
UBC9YDL064W RAS1P01119 309 aa6.45□□□□□ -1.38
UBC9YDL064W KIP2P28743 706 aa6.45□□□□□ -1.38
UBC9YDL064W IXR1P33417 597 aa6.45□□□□□ -1.38
UBC9YDL064W SOH1P38633 127 aa6.45□□□□□ -1.38
UBC9YDL064W YEL077CQ3E7X8 1277 aa6.44□□□□□ -1.38
UBC9YDL064W SSA1P10591 642 aaKnown RBP6.43□□□□□ -1.38
UBC9YDL064W MRX12P47084 519 aa6.43□□□□□ -1.38
UBC9YDL064W CLA4P48562 842 aa6.43□□□□□ -1.38
UBC9YDL064W APP1P53933 587 aa6.43□□□□□ -1.38
UBC9YDL064W ECM23Q02710 187 aa6.43□□□□□ -1.38
UBC9YDL064W AMS1P22855 1083 aa6.42□□□□□ -1.38
UBC9YDL064W HAL5P38970 855 aaKnown RBP6.42□□□□□ -1.38
UBC9YDL064W SIS2P36024 562 aa6.41□□□□□ -1.38
UBC9YDL064W SYH1Q02875 849 aaKnown RBP6.41□□□□□ -1.38
UBC9YDL064W GEF1P37020 779 aa6.4□□□□□ -1.38
UBC9YDL064W ISR1Q06098 443 aaKnown RBP6.4□□□□□ -1.38
UBC9YDL064W GAL2P13181 574 aa6.38□□□□□ -1.39
UBC9YDL064W ATG3P40344 310 aa6.38□□□□□ -1.39
UBC9YDL064W EMW1P42842 904 aaKnown RBP6.38□□□□□ -1.39
UBC9YDL064W UTP13Q05946 817 aaKnown RBP6.38□□□□□ -1.39
UBC9YDL064W ATG20Q07528 640 aa6.38□□□□□ -1.39
UBC9YDL064W UBX7P38349 436 aa6.36□□□□□ -1.39
UBC9YDL064W ACS2P52910 683 aaKnown RBP6.36□□□□□ -1.39
UBC9YDL064W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39 RIP-Chip
UBC9YDL064W MIP1P15801 1254 aa6.35□□□□□ -1.39
UBC9YDL064W PDI1P17967 522 aaKnown RBP6.35□□□□□ -1.39
UBC9YDL064W AIR1P40507 360 aaKnown RBP6.35□□□□□ -1.39
UBC9YDL064W HED1Q03937 162 aa6.35□□□□□ -1.39
UBC9YDL064W HDA3Q06623 655 aa6.35□□□□□ -1.39
UBC9YDL064W MET32Q12041 191 aa6.35□□□□□ -1.39
UBC9YDL064W PHO87P25360 923 aa6.34□□□□□ -1.39
UBC9YDL064W MRT4P33201 236 aaKnown RBP6.34□□□□□ -1.39
UBC9YDL064W RPL34AP87262 121 aaPredicted RBP6.34□□□□□ -1.39
UBC9YDL064W MKS1P34072 584 aa6.33□□□□□ -1.4
UBC9YDL064W ROM1P53046 1155 aa6.33□□□□□ -1.4
UBC9YDL064W ISU1Q03020 165 aa6.32□□□□□ -1.4
UBC9YDL064W DFG5Q05031 458 aa6.32□□□□□ -1.4
UBC9YDL064W TSC13Q99190 310 aa6.32□□□□□ -1.4
UBC9YDL064W DPS1P04802 557 aaKnown RBP6.31□□□□□ -1.4
UBC9YDL064W YBL086CP38177 466 aa6.31□□□□□ -1.4
UBC9YDL064W HAP4P14064 554 aa6.3□□□□□ -1.4
UBC9YDL064W FBP26P32604 452 aa6.3□□□□□ -1.4
UBC9YDL064W NTH2P35172 780 aa6.29□□□□□ -1.4
UBC9YDL064W TPS3P38426 1054 aaKnown RBP6.29□□□□□ -1.4
UBC9YDL064W AIM9P40053 627 aaKnown RBP6.29□□□□□ -1.4
UBC9YDL064W SLX8P40072 274 aa6.29□□□□□ -1.4
UBC9YDL064W SPT2P06843 333 aaPredicted RBP6.28□□□□□ -1.4
UBC9YDL064W STE6P12866 1290 aa6.28□□□□□ -1.4
UBC9YDL064W DAT1P13483 248 aaKnown RBP6.28□□□□□ -1.4
UBC9YDL064W UTR2P32623 467 aa6.28□□□□□ -1.4
UBC9YDL064W CDC3P32457 520 aaKnown RBP6.27□□□□□ -1.41
UBC9YDL064W YML020WQ03722 664 aa6.27□□□□□ -1.41
UBC9YDL064W CDC4P07834 779 aa6.26□□□□□ -1.41
UBC9YDL064W SWI5P08153 709 aa6.26□□□□□ -1.41
UBC9YDL064W ASH1P34233 588 aa6.26□□□□□ -1.41
UBC9YDL064W CWC15Q03772 175 aaKnown RBP6.26□□□□□ -1.41
UBC9YDL064W GAS4Q08271 471 aa6.26□□□□□ -1.41
UBC9YDL064W WTM2Q12206 467 aa6.26□□□□□ -1.41
UBC9YDL064W RPS6AP0CX37 236 aaKnown RBP6.25□□□□□ -1.41
UBC9YDL064W RPS6BP0CX38 236 aaPredicted RBP6.25□□□□□ -1.41
UBC9YDL064W YFL034WP43564 1073 aa6.25□□□□□ -1.41
UBC9YDL064W BDS1Q08347 646 aa6.25□□□□□ -1.41
UBC9YDL064W HAT1Q12341 374 aa6.24□□□□□ -1.41
UBC9YDL064W AFT1P22149 690 aa6.23□□□□□ -1.41
UBC9YDL064W SUV3P32580 737 aa6.23□□□□□ -1.41
UBC9YDL064W VAN1P23642 535 aa6.22□□□□□ -1.41
UBC9YDL064W TBS1P38114 1094 aa6.22□□□□□ -1.41
UBC9YDL064W UTP7P40055 554 aaKnown RBP6.22□□□□□ -1.41
UBC9YDL064W PUN1Q06991 263 aa6.22□□□□□ -1.41
UBC9YDL064W CYT1P07143 309 aa6.21□□□□□ -1.42
UBC9YDL064W UGA3P26370 528 aa6.21□□□□□ -1.42
UBC9YDL064W HST3P53687 447 aa6.21□□□□□ -1.42
UBC9YDL064W PUF6Q04373 656 aaKnown RBP6.21□□□□□ -1.42
UBC9YDL064W PNP1Q05788 311 aa6.2□□□□□ -1.42
UBC9YDL064W NOP8Q08287 484 aaPredicted RBP6.2□□□□□ -1.42
UBC9YDL064W MSB3P48566 633 aaPredicted RBP6.19□□□□□ -1.42
UBC9YDL064W BOL3P39724 118 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms