RNA–Protein interactions for RNA: YBR091C

TIM12, Transcript of Essential protein of the inner mitochondrial membrane, yeast

Gene TIM12, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM12	YBR091C	RTC1	Q08281	1341 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	SSA4	P22202	642 aa	Known RBP	4.51	□□□□□ -1.69
TIM12	YBR091C	COQ8	P27697	501 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	YKL133C	P36066	463 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	PAF1	P38351	445 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	EAF6	P47128	113 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	APC1	P53886	1748 aa		4.51	□□□□□ -1.69
TIM12	YBR091C	YEF3	P16521	1044 aa	Known RBP	4.5	□□□□□ -1.69
TIM12	YBR091C	DIT2	P21595	489 aa		4.5	□□□□□ -1.69
TIM12	YBR091C	TAF8	Q03750	510 aa		4.5	□□□□□ -1.69
TIM12	YBR091C	MAK21	Q12176	1025 aa	Known RBP	4.5	□□□□□ -1.69
TIM12	YBR091C	SLM3	Q12093	417 aa		4.49	□□□□□ -1.69
TIM12	YBR091C	RIM15	P43565	1770 aa		4.48	□□□□□ -1.69
TIM12	YBR091C	NAP1	P25293	417 aa	Known RBP	4.48	□□□□□ -1.69
TIM12	YBR091C	BDF1	P35817	686 aa		4.48	□□□□□ -1.69
TIM12	YBR091C	BRL1	P38770	471 aa		4.48	□□□□□ -1.69
TIM12	YBR091C	NUP42	P49686	430 aa	Known RBP	4.48	□□□□□ -1.69
TIM12	YBR091C	SQS1	P53866	767 aa	Known RBP	4.48	□□□□□ -1.69
TIM12	YBR091C	ALD3	P54114	506 aa		4.48	□□□□□ -1.69
TIM12	YBR091C	YML020W	Q03722	664 aa		4.48	□□□□□ -1.69
TIM12	YBR091C	XKS1	P42826	600 aa		4.47	□□□□□ -1.69
TIM12	YBR091C	HPC2	Q01448	625 aa		4.47	□□□□□ -1.69
TIM12	YBR091C	TFB3	Q03290	321 aa		4.47	□□□□□ -1.69
TIM12	YBR091C	SPT7	P35177	1332 aa		4.46	□□□□□ -1.69
TIM12	YBR091C	ENP1	P38333	483 aa	Known RBP	4.46	□□□□□ -1.7
TIM12	YBR091C	FRK1	Q03002	865 aa	Predicted RBP	4.46	□□□□□ -1.7
TIM12	YBR091C	NOP53	Q12080	455 aa	Known RBP	4.46	□□□□□ -1.7
TIM12	YBR091C	GEF1	P37020	779 aa		4.45	□□□□□ -1.7
TIM12	YBR091C	SLX8	P40072	274 aa		4.45	□□□□□ -1.7
TIM12	YBR091C	PEX21	P50091	288 aa		4.45	□□□□□ -1.7
TIM12	YBR091C	PUS5	Q06244	254 aa		4.45	□□□□□ -1.7
TIM12	YBR091C	YER156C	P40093	338 aa	Known RBP	4.44	□□□□□ -1.7
TIM12	YBR091C	MSN5	P52918	1224 aa		4.44	□□□□□ -1.7
TIM12	YBR091C	YLR419W	Q06698	1435 aa	Known RBP	4.44	□□□□□ -1.7
TIM12	YBR091C	COX6	P00427	148 aa		4.43	□□□□□ -1.7
TIM12	YBR091C	CSE4	P36012	229 aa		4.43	□□□□□ -1.7
TIM12	YBR091C	SAP155	P43612	1002 aa		4.43	□□□□□ -1.7
TIM12	YBR091C	SCY1	P53009	804 aa		4.43	□□□□□ -1.7
TIM12	YBR091C	MHP1	P43638	1398 aa		4.42	□□□□□ -1.7
TIM12	YBR091C	RPS24A	P0CX31	135 aa	Known RBP	4.42	□□□□□ -1.7
TIM12	YBR091C	RPS24B	P0CX32	135 aa	Known RBP	4.42	□□□□□ -1.7
TIM12	YBR091C	VPS29	P38759	282 aa		4.42	□□□□□ -1.7
TIM12	YBR091C	KIN4	Q01919	800 aa		4.42	□□□□□ -1.7
TIM12	YBR091C	BUG1	Q12191	341 aa		4.42	□□□□□ -1.7
TIM12	YBR091C	CTT1	P06115	562 aa		4.41	□□□□□ -1.7
TIM12	YBR091C	TOS1	P38288	455 aa		4.41	□□□□□ -1.7
TIM12	YBR091C	RPL34B	P40525	121 aa	Known RBP	4.41	□□□□□ -1.7
TIM12	YBR091C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
TIM12	YBR091C	NOP7	P53261	605 aa	Known RBP	4.41	□□□□□ -1.7
TIM12	YBR091C	ADE16	P54113	591 aa	Known RBP	4.41	□□□□□ -1.7
TIM12	YBR091C	MSB4	Q12317	492 aa		4.41	□□□□□ -1.7
TIM12	YBR091C	EDS1	P38073	919 aa		4.4	□□□□□ -1.71
TIM12	YBR091C	YJL007C	P47080	104 aa		4.4	□□□□□ -1.71
TIM12	YBR091C	DUS1	P53759	423 aa	Known RBP	4.4	□□□□□ -1.71
TIM12	YBR091C	SUB2	Q07478	446 aa	Known RBP	4.4	□□□□□ -1.71
TIM12	YBR091C	RIX7	Q07844	837 aa	Known RBP	4.4	□□□□□ -1.71
TIM12	YBR091C	PKC1	P24583	1151 aa		4.39	□□□□□ -1.71
TIM12	YBR091C	ESL2	P36168	1195 aa		4.39	□□□□□ -1.71
TIM12	YBR091C	KIC1	P38692	1080 aa		4.38	□□□□□ -1.71
TIM12	YBR091C	BIM1	P40013	344 aa		4.38	□□□□□ -1.71
TIM12	YBR091C	CHZ1	P40019	153 aa	Predicted RBP	4.38	□□□□□ -1.71
TIM12	YBR091C	CSN12	P47130	423 aa		4.38	□□□□□ -1.71
TIM12	YBR091C	CWH41	P53008	833 aa		4.38	□□□□□ -1.71
TIM12	YBR091C	PRP43	P53131	767 aa	Known RBP	4.38	□□□□□ -1.71
TIM12	YBR091C	NOP8	Q08287	484 aa	Predicted RBP	4.38	□□□□□ -1.71
TIM12	YBR091C	GRE2	Q12068	342 aa	Known RBP	4.38	□□□□□ -1.71
TIM12	YBR091C	RPO41	P13433	1351 aa	Known RBP	4.38	□□□□□ -1.71
TIM12	YBR091C	DBP1	P24784	617 aa	Known RBP	4.37	□□□□□ -1.71
TIM12	YBR091C	UBP14	P38237	781 aa	Known RBP	4.37	□□□□□ -1.71
TIM12	YBR091C	SLI15	P38283	698 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	STS1	P38637	319 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	VHR2	P40041	505 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	MTR4	P47047	1073 aa	Known RBP	4.37	□□□□□ -1.71
TIM12	YBR091C	UTP22	P53254	1237 aa	Predicted RBP	4.37	□□□□□ -1.71
TIM12	YBR091C	MEC3	Q02574	474 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	YLR278C	Q05854	1341 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	SIR4	P11978	1358 aa		4.37	□□□□□ -1.71
TIM12	YBR091C	LEU2	P04173	364 aa	Predicted RBP	4.36	□□□□□ -1.71
TIM12	YBR091C	TOP1	P04786	769 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	THS1	P04801	734 aa	Known RBP	4.36	□□□□□ -1.71
TIM12	YBR091C	RAD4	P14736	754 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	SDH2	P21801	266 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	PTC3	P34221	468 aa	Known RBP	4.36	□□□□□ -1.71
TIM12	YBR091C	SLD2	P34252	453 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	YKL222C	P35995	705 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	ERT1	P38140	529 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	ETP1	P38748	585 aa	Known RBP	4.36	□□□□□ -1.71
TIM12	YBR091C	ATG32	P40458	529 aa		4.36	□□□□□ -1.71
TIM12	YBR091C	RPL34A	P87262	121 aa	Predicted RBP	4.36	□□□□□ -1.71
TIM12	YBR091C	SPE2	P21182	396 aa		4.35	□□□□□ -1.71
TIM12	YBR091C	FPK1	P53739	893 aa		4.35	□□□□□ -1.71
TIM12	YBR091C	ATG13	Q06628	738 aa		4.35	□□□□□ -1.71
TIM12	YBR091C	DPS1	P04802	557 aa	Known RBP	4.34	□□□□□ -1.71
TIM12	YBR091C	RRT14	P40470	206 aa		4.34	□□□□□ -1.71
TIM12	YBR091C	FAS2	P19097	1887 aa	Known RBP	4.33	□□□□□ -1.72
TIM12	YBR091C	YML133C	Q03099	1374 aa		4.33	□□□□□ -1.72
TIM12	YBR091C	YLL067C	Q07888	1374 aa		4.33	□□□□□ -1.72
TIM12	YBR091C	YLL066C	Q99208	1374 aa		4.33	□□□□□ -1.72
TIM12	YBR091C	POM152	P39685	1337 aa		4.33	□□□□□ -1.72
TIM12	YBR091C	VPS13	Q07878	3144 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms