RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C TMA64Q04600 565 aaKnown RBP7.17□□□□□ -1.26
SEC18YBR080C NUT2Q06213 157 aa7.17□□□□□ -1.26
SEC18YBR080C ESS1P22696 170 aa7.17□□□□□ -1.26
SEC18YBR080C MNN1P39106 762 aa7.17□□□□□ -1.26
SEC18YBR080C RGR1P19263 1082 aa7.16□□□□□ -1.26
SEC18YBR080C BOI1P38041 980 aaKnown RBP7.16□□□□□ -1.26
SEC18YBR080C RPT2P40327 437 aaKnown RBP7.16□□□□□ -1.26
SEC18YBR080C NOP2P40991 618 aaKnown RBP7.16□□□□□ -1.26
SEC18YBR080C PKH3Q03306 898 aaPredicted RBP7.16□□□□□ -1.26
SEC18YBR080C SPR28Q04921 423 aa7.15□□□□□ -1.26
SEC18YBR080C KAR1P11927 433 aa7.15□□□□□ -1.27
SEC18YBR080C DAL5P15365 543 aa7.15□□□□□ -1.27
SEC18YBR080C VPS24P36095 224 aaKnown RBP7.15□□□□□ -1.27
SEC18YBR080C NKP1Q12493 238 aa7.15□□□□□ -1.27
SEC18YBR080C COG4Q06096 861 aa7.14□□□□□ -1.27
SEC18YBR080C STI1P15705 589 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SEC18YBR080C UBX7P38349 436 aa7.13□□□□□ -1.27
SEC18YBR080C YMR1P47147 688 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SEC18YBR080C ITC1P53125 1264 aa7.13□□□□□ -1.27
SEC18YBR080C GAL2P13181 574 aa7.13□□□□□ -1.27
SEC18YBR080C PWP2P25635 923 aaKnown RBP7.13□□□□□ -1.27
SEC18YBR080C CDC11P32458 415 aa7.13□□□□□ -1.27
SEC18YBR080C THI12P42883 340 aa7.13□□□□□ -1.27
SEC18YBR080C THI5P43534 340 aa7.13□□□□□ -1.27
SEC18YBR080C THI11P47183 340 aa7.13□□□□□ -1.27
SEC18YBR080C THI13Q07748 340 aa7.13□□□□□ -1.27
SEC18YBR080C YGL081WP53156 320 aa7.12□□□□□ -1.27
SEC18YBR080C PUF6Q04373 656 aaKnown RBP7.12□□□□□ -1.27
SEC18YBR080C THS1P04801 734 aaKnown RBP7.12□□□□□ -1.27
SEC18YBR080C YEN1P40028 759 aa7.12□□□□□ -1.27
SEC18YBR080C EMP47P43555 445 aa7.12□□□□□ -1.27
SEC18YBR080C SPT5P27692 1063 aaKnown RBP7.11□□□□□ -1.27
SEC18YBR080C YJL049WP47048 450 aa7.11□□□□□ -1.27
SEC18YBR080C FAP1P53971 965 aa7.11□□□□□ -1.27
SEC18YBR080C GPI13Q07830 1017 aa7.11□□□□□ -1.27
SEC18YBR080C TRX2P22803 104 aaKnown RBP7.11□□□□□ -1.27
SEC18YBR080C VPS27P40343 622 aaKnown RBP7.11□□□□□ -1.27
SEC18YBR080C YFR006WP43590 535 aa7.11□□□□□ -1.27
SEC18YBR080C MGE1P38523 228 aa7.1□□□□□ -1.27
SEC18YBR080C CDC53Q12018 815 aaKnown RBP7.1□□□□□ -1.27
SEC18YBR080C MMP1Q12372 583 aa7.1□□□□□ -1.27
SEC18YBR080C YGR161W-CQ3E744 92 aa7.1□□□□□ -1.27
SEC18YBR080C DBP1P24784 617 aaKnown RBP7.1□□□□□ -1.27
SEC18YBR080C MCM2P29469 868 aa7.1□□□□□ -1.27
SEC18YBR080C KTR7P40504 517 aa7.1□□□□□ -1.27
SEC18YBR080C PEX8P53248 589 aa7.1□□□□□ -1.27
SEC18YBR080C FOL1P53848 824 aa7.1□□□□□ -1.27
SEC18YBR080C PAF1P38351 445 aa7.09□□□□□ -1.27
SEC18YBR080C MVP1P40959 511 aaKnown RBP7.09□□□□□ -1.27
SEC18YBR080C YOR378WQ08902 515 aa7.09□□□□□ -1.27
SEC18YBR080C GAP1P19145 602 aaPredicted RBP7.08□□□□□ -1.28
SEC18YBR080C RPS0AP32905 252 aaKnown RBP7.08□□□□□ -1.28
SEC18YBR080C NOC2P39744 710 aaKnown RBP7.08□□□□□ -1.28
SEC18YBR080C SOL3P38858 249 aa7.07□□□□□ -1.28
SEC18YBR080C PNP1Q05788 311 aa7.07□□□□□ -1.28
SEC18YBR080C MET6P05694 767 aaKnown RBP7.07□□□□□ -1.28
SEC18YBR080C MIP1P15801 1254 aa7.07□□□□□ -1.28
SEC18YBR080C GRX7P38068 203 aa7.07□□□□□ -1.28
SEC18YBR080C IES5P40060 125 aa7.07□□□□□ -1.28
SEC18YBR080C QDR1P40475 563 aa7.07□□□□□ -1.28
SEC18YBR080C CEF1Q03654 590 aaPredicted RBP7.07□□□□□ -1.28
SEC18YBR080C SIT4P20604 311 aa7.06□□□□□ -1.28
SEC18YBR080C HOS4P40480 1083 aa7.06□□□□□ -1.28
SEC18YBR080C ACF4P47129 309 aa7.06□□□□□ -1.28
SEC18YBR080C TAF13P11747 167 aa7.06□□□□□ -1.28
SEC18YBR080C ARG8P18544 423 aa7.06□□□□□ -1.28
SEC18YBR080C HUL5P53119 910 aa7.06□□□□□ -1.28
SEC18YBR080C YGR273CP53329 174 aa7.06□□□□□ -1.28
SEC18YBR080C PHO4P07270 312 aaKnown RBP7.05□□□□□ -1.28
SEC18YBR080C RAD27P26793 382 aa7.05□□□□□ -1.28
SEC18YBR080C NUP82P40368 713 aa7.05□□□□□ -1.28
SEC18YBR080C ROM1P53046 1155 aa7.05□□□□□ -1.28
SEC18YBR080C PIF1P07271 859 aa7.04□□□□□ -1.28
SEC18YBR080C TIM23P32897 222 aa7.04□□□□□ -1.28
SEC18YBR080C YHR020WP38708 688 aaKnown RBP7.04□□□□□ -1.28
SEC18YBR080C ESF1Q06344 628 aaKnown RBP7.04□□□□□ -1.28
SEC18YBR080C HAA1Q12753 694 aaKnown RBP7.04□□□□□ -1.28
SEC18YBR080C RAD54P32863 898 aa7.04□□□□□ -1.28
SEC18YBR080C SNU66Q12420 587 aaPredicted RBP7.04□□□□□ -1.28
SEC18YBR080C KIC1P38692 1080 aa7.03□□□□□ -1.28
SEC18YBR080C RTT106P40161 455 aa7.03□□□□□ -1.28
SEC18YBR080C GDE1Q02979 1223 aa7.03□□□□□ -1.28
SEC18YBR080C ENT2Q05785 613 aa7.03□□□□□ -1.28
SEC18YBR080C ERP4Q12450 207 aa7.03□□□□□ -1.28
SEC18YBR080C MFT1P33441 392 aaKnown RBP7.03□□□□□ -1.28
SEC18YBR080C DAK2P43550 591 aa7.03□□□□□ -1.28
SEC18YBR080C WRS1Q12109 432 aaKnown RBP7.03□□□□□ -1.28
SEC18YBR080C GRX1P25373 110 aaKnown RBP7.02□□□□□ -1.29
SEC18YBR080C FAF1P40546 346 aaPredicted RBP7.02□□□□□ -1.29
SEC18YBR080C ESF2P53743 316 aaKnown RBP7.02□□□□□ -1.29
SEC18YBR080C MCM16Q12262 181 aa7.02□□□□□ -1.29
SEC18YBR080C YNR029CP53729 429 aaKnown RBP7.02□□□□□ -1.29
SEC18YBR080C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SEC18YBR080C DPS1P04802 557 aaKnown RBP7.01□□□□□ -1.29
SEC18YBR080C SRS2P12954 1174 aa7.01□□□□□ -1.29
SEC18YBR080C CLB5P30283 435 aa7.01□□□□□ -1.29
SEC18YBR080C MAD1P40957 749 aa7.01□□□□□ -1.29
SEC18YBR080C MSH4P40965 878 aaPredicted RBP7.01□□□□□ -1.29
SEC18YBR080C NST1P53935 1240 aa7.01□□□□□ -1.29
SEC18YBR080C RPT1P33299 467 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms