RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C PDR1P12383 1068 aa3.4□□□□□ -1.87
PRP6YBR055C GLO3P38682 493 aaKnown RBP3.4□□□□□ -1.87
PRP6YBR055C FIG4P42837 879 aa3.4□□□□□ -1.87
PRP6YBR055C ATG1P53104 897 aa3.4□□□□□ -1.87
PRP6YBR055C FRA1Q07825 749 aa3.4□□□□□ -1.87
PRP6YBR055C FUR4P05316 633 aaKnown RBP3.39□□□□□ -1.87
PRP6YBR055C SEC8P32855 1065 aa3.39□□□□□ -1.87
PRP6YBR055C ISM1P48526 1002 aa3.39□□□□□ -1.87
PRP6YBR055C TUB4P53378 473 aa3.39□□□□□ -1.87
PRP6YBR055C JIP5Q06214 492 aaPredicted RBP3.39□□□□□ -1.87
PRP6YBR055C PDI1P17967 522 aaKnown RBP3.39□□□□□ -1.87
PRP6YBR055C GCD11P32481 527 aaKnown RBP3.39□□□□□ -1.87
PRP6YBR055C BRN1P38170 754 aa3.39□□□□□ -1.87
PRP6YBR055C ULI1P43604 169 aa3.39□□□□□ -1.87
PRP6YBR055C RPA14P50106 137 aa3.39□□□□□ -1.87
PRP6YBR055C NUT2Q06213 157 aa3.39□□□□□ -1.87
PRP6YBR055C SRS2P12954 1174 aa3.38□□□□□ -1.87
PRP6YBR055C QDR1P40475 563 aa3.38□□□□□ -1.87
PRP6YBR055C STR2P47164 639 aa3.38□□□□□ -1.87
PRP6YBR055C AGE1Q04412 482 aa3.38□□□□□ -1.87
PRP6YBR055C YPR084WQ06821 456 aa3.38□□□□□ -1.87
PRP6YBR055C MGE1P38523 228 aa3.38□□□□□ -1.87
PRP6YBR055C NNF1P47149 201 aa3.38□□□□□ -1.87
PRP6YBR055C ALR1Q08269 859 aa3.38□□□□□ -1.87
PRP6YBR055C GAS4Q08271 471 aa3.38□□□□□ -1.87
PRP6YBR055C FRT1Q99332 602 aa3.38□□□□□ -1.87
PRP6YBR055C RAM1P22007 431 aa3.37□□□□□ -1.87
PRP6YBR055C ALD4P46367 519 aaKnown RBP3.37□□□□□ -1.87
PRP6YBR055C SVF1Q05515 481 aa3.37□□□□□ -1.87
PRP6YBR055C UTP13Q05946 817 aaKnown RBP3.37□□□□□ -1.87
PRP6YBR055C TSC13Q99190 310 aa3.37□□□□□ -1.87
PRP6YBR055C VAN1P23642 535 aa3.37□□□□□ -1.87
PRP6YBR055C YPR097WQ06839 1073 aa3.37□□□□□ -1.87
PRP6YBR055C STB3Q12427 513 aa3.37□□□□□ -1.87
PRP6YBR055C YBL029C-AQ3E756 94 aa3.37□□□□□ -1.87
PRP6YBR055C MET1P36150 593 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-DR4O74302 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-HP0C2I4 478 aaKnown RBP3.36□□□□□ -1.87
PRP6YBR055C TY1A-AP0CX57 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-PR1P0CX58 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-ORP0CX59 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-PR2P0CX60 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-DR5P0CX65 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-ER2P0CX66 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-GR3P0CX67 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-LR1P0CX68 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-MR2P0CX69 440 aa3.36□□□□□ -1.87
PRP6YBR055C MIP1P15801 1254 aa3.36□□□□□ -1.87
PRP6YBR055C TIF11P38912 153 aaKnown RBP3.36□□□□□ -1.87
PRP6YBR055C APL6P46682 809 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-JR2P47099 440 aa3.36□□□□□ -1.87
PRP6YBR055C YNL035CP53962 389 aaKnown RBP3.36□□□□□ -1.87
PRP6YBR055C TY1A-DR1Q03856 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-ML1Q04706 440 aaKnown RBP3.36□□□□□ -1.87
PRP6YBR055C TY1A-BRQ12217 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-NL2Q12470 440 aa3.36□□□□□ -1.87
PRP6YBR055C TY1A-GR2Q12485 440 aa3.36□□□□□ -1.87
PRP6YBR055C TRS33Q99394 268 aa3.36□□□□□ -1.87
PRP6YBR055C PDC1P06169 563 aaKnown RBP3.35□□□□□ -1.87
PRP6YBR055C BUD31P25337 157 aaPredicted RBP3.35□□□□□ -1.87
PRP6YBR055C ACF4P47129 309 aa3.35□□□□□ -1.87
PRP6YBR055C MET4P32389 672 aa3.35□□□□□ -1.87
PRP6YBR055C PAC1P39946 494 aaKnown RBP3.35□□□□□ -1.87
PRP6YBR055C VNX1P42839 908 aa3.35□□□□□ -1.87
PRP6YBR055C YJR107WP47145 328 aa3.35□□□□□ -1.87
PRP6YBR055C FPR4Q06205 392 aaPredicted RBP3.35□□□□□ -1.87
PRP6YBR055C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
PRP6YBR055C SEC2P17065 759 aa3.35□□□□□ -1.87
PRP6YBR055C HAL5P38970 855 aaKnown RBP3.35□□□□□ -1.87
PRP6YBR055C KXD1P53158 218 aa3.35□□□□□ -1.87
PRP6YBR055C ISR1Q06098 443 aaKnown RBP3.35□□□□□ -1.87
PRP6YBR055C IXR1P33417 597 aa3.34□□□□□ -1.87
PRP6YBR055C SPC42P36094 363 aa3.34□□□□□ -1.87
PRP6YBR055C FYV10P40492 516 aa3.34□□□□□ -1.87
PRP6YBR055C CST6P40535 587 aa3.34□□□□□ -1.87
PRP6YBR055C YFL034WP43564 1073 aa3.34□□□□□ -1.87
PRP6YBR055C SPP1Q03012 353 aa3.34□□□□□ -1.87
PRP6YBR055C MAG2Q06436 670 aaKnown RBP3.34□□□□□ -1.87
PRP6YBR055C RTG1P32607 177 aa3.34□□□□□ -1.88
PRP6YBR055C AIM9P40053 627 aaKnown RBP3.34□□□□□ -1.88
PRP6YBR055C IOC2Q12072 812 aa3.34□□□□□ -1.88
PRP6YBR055C RRN7P40992 514 aa3.33□□□□□ -1.88
PRP6YBR055C MCM2P29469 868 aa3.33□□□□□ -1.88
PRP6YBR055C SUV3P32580 737 aa3.33□□□□□ -1.88
PRP6YBR055C NTH2P35172 780 aa3.33□□□□□ -1.88
PRP6YBR055C BOI1P38041 980 aaKnown RBP3.33□□□□□ -1.88
PRP6YBR055C VAC8P39968 578 aa3.33□□□□□ -1.88
PRP6YBR055C CWH41P53008 833 aa3.33□□□□□ -1.88
PRP6YBR055C HAP5Q02516 242 aa3.33□□□□□ -1.88
PRP6YBR055C BUD20Q08004 166 aaPredicted RBP3.33□□□□□ -1.88
PRP6YBR055C HDA3Q06623 655 aa3.32□□□□□ -1.88
PRP6YBR055C MNL2Q12205 849 aa3.32□□□□□ -1.88
PRP6YBR055C YOL098CQ12496 1037 aa3.32□□□□□ -1.88
PRP6YBR055C LSO1Q3E827 93 aa3.32□□□□□ -1.88
PRP6YBR055C VAC17P25591 423 aa3.32□□□□□ -1.88
PRP6YBR055C TFG1P41895 735 aaPredicted RBP3.32□□□□□ -1.88
PRP6YBR055C ALD6P54115 500 aaKnown RBP3.32□□□□□ -1.88
PRP6YBR055C CYT1P07143 309 aa3.31□□□□□ -1.88
PRP6YBR055C RPT1P33299 467 aaKnown RBP3.31□□□□□ -1.88
PRP6YBR055C MAD1P40957 749 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms