RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	PAP2	P53632	584 aa	Known RBP	4.7	□□□□□ -1.66
FAT1	YBR041W	MAK21	Q12176	1025 aa	Known RBP	4.7	□□□□□ -1.66
FAT1	YBR041W	AKL1	P38080	1108 aa	Known RBP	4.69	□□□□□ -1.66
FAT1	YBR041W	DMA2	P53924	522 aa		4.69	□□□□□ -1.66
FAT1	YBR041W	LYS2	P07702	1392 aa		4.69	□□□□□ -1.66
FAT1	YBR041W	DPS1	P04802	557 aa	Known RBP	4.68	□□□□□ -1.66
FAT1	YBR041W	YFR016C	P43597	1233 aa	Known RBP	4.68	□□□□□ -1.66
FAT1	YBR041W	DSD1	P53095	428 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	YNL050C	P53952	270 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	YRF1-3	P0CX14	1859 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	YRF1-7	P0CX15	1859 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	YRF1-6	P53819	1859 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	SCY1	P53009	804 aa		4.68	□□□□□ -1.66
FAT1	YBR041W	DAL5	P15365	543 aa		4.67	□□□□□ -1.66
FAT1	YBR041W	NTH2	P35172	780 aa		4.67	□□□□□ -1.66
FAT1	YBR041W	MAM1	P40065	302 aa		4.67	□□□□□ -1.66
FAT1	YBR041W	GAS4	Q08271	471 aa		4.67	□□□□□ -1.66
FAT1	YBR041W	GYP7	P48365	746 aa		4.67	□□□□□ -1.66
FAT1	YBR041W	CTF4	Q01454	927 aa		4.66	□□□□□ -1.66
FAT1	YBR041W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
FAT1	YBR041W	THI12	P42883	340 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	THI5	P43534	340 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	YPP1	P46951	817 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	THI11	P47183	340 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	SRT1	Q03175	343 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	THI13	Q07748	340 aa		4.65	□□□□□ -1.67
FAT1	YBR041W	DUR1,2	P32528	1835 aa	Known RBP	4.64	□□□□□ -1.67
FAT1	YBR041W	RIM101	P33400	625 aa		4.64	□□□□□ -1.67
FAT1	YBR041W	MIF2	P35201	549 aa		4.64	□□□□□ -1.67
FAT1	YBR041W	TRP5	P00931	707 aa	Known RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	ZDS1	P50111	915 aa	Known RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	RPS19A	P07280	144 aa	Known RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	RPS19B	P07281	144 aa	Predicted RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	RRT14	P40470	206 aa		4.63	□□□□□ -1.67
FAT1	YBR041W	ECM16	Q04217	1267 aa	Known RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	PUF6	Q04373	656 aa	Known RBP	4.63	□□□□□ -1.67
FAT1	YBR041W	SLM3	Q12093	417 aa		4.63	□□□□□ -1.67
FAT1	YBR041W	RIM15	P43565	1770 aa		4.62	□□□□□ -1.67
FAT1	YBR041W	AOS1	Q06624	347 aa		4.62	□□□□□ -1.67
FAT1	YBR041W	RSF2	P46974	1380 aa		4.62	□□□□□ -1.67
FAT1	YBR041W	UGA3	P26370	528 aa		4.62	□□□□□ -1.67
FAT1	YBR041W	BCH2	P36122	765 aa		4.62	□□□□□ -1.67
FAT1	YBR041W	ILV3	P39522	585 aa	Known RBP	4.62	□□□□□ -1.67
FAT1	YBR041W	NUP145	P49687	1317 aa		4.61	□□□□□ -1.67
FAT1	YBR041W	COQ4	O13525	335 aa		4.61	□□□□□ -1.67
FAT1	YBR041W	PCT1	P13259	424 aa		4.61	□□□□□ -1.67
FAT1	YBR041W	PRP5	P21372	849 aa	Predicted RBP	4.61	□□□□□ -1.67
FAT1	YBR041W	SLX5	P32828	619 aa	Known RBP	4.61	□□□□□ -1.67
FAT1	YBR041W	GCD7	P32502	381 aa	Predicted RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	CSI1	Q04368	295 aa		4.6	□□□□□ -1.67
FAT1	YBR041W	BMS1	Q08965	1183 aa	Known RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	RAD50	P12753	1312 aa		4.6	□□□□□ -1.67
FAT1	YBR041W	CLC1	P17891	233 aa		4.6	□□□□□ -1.67
FAT1	YBR041W	HSP104	P31539	908 aa	Known RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	SNF7	P39929	240 aa	Known RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	HGH1	P48362	394 aa	Known RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	MSB3	P48566	633 aa	Predicted RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	UTP10	P42945	1769 aa	Known RBP	4.6	□□□□□ -1.67
FAT1	YBR041W	ROM2	P51862	1356 aa	Known RBP	4.59	□□□□□ -1.67
FAT1	YBR041W	EAF7	P53911	425 aa	Known RBP	4.59	□□□□□ -1.67
FAT1	YBR041W	YDR306C	Q06640	478 aa		4.59	□□□□□ -1.67
FAT1	YBR041W	YOL057W	Q08225	711 aa		4.59	□□□□□ -1.67
FAT1	YBR041W	LSP1	Q12230	341 aa	Known RBP	4.59	□□□□□ -1.67
FAT1	YBR041W	KCC4	P25389	1037 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	RCR1	P38212	213 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	YNG2	P38806	282 aa	Known RBP	4.58	□□□□□ -1.68
FAT1	YBR041W	TIF4632	P39936	914 aa	Known RBP	4.58	□□□□□ -1.68
FAT1	YBR041W	TGL3	P40308	642 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	XKS1	P42826	600 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	NSE3	Q05541	303 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	INP54	Q08227	384 aa	Known RBP	4.58	□□□□□ -1.68
FAT1	YBR041W	CDC16	P09798	840 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	ROX1	P25042	368 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	AIM44	Q99299	758 aa		4.58	□□□□□ -1.68
FAT1	YBR041W	PRP45	P28004	379 aa	Predicted RBP	4.57	□□□□□ -1.68
FAT1	YBR041W	RAD24	P32641	659 aa		4.57	□□□□□ -1.68
FAT1	YBR041W	YJR008W	P47085	338 aa		4.57	□□□□□ -1.68
FAT1	YBR041W	SPO1	P53541	631 aa		4.57	□□□□□ -1.68
FAT1	YBR041W	NKP2	Q06162	153 aa		4.57	□□□□□ -1.68
FAT1	YBR041W	TCB1	Q12466	1186 aa		4.57	□□□□□ -1.68
FAT1	YBR041W	VPS24	P36095	224 aa	Known RBP	4.56	□□□□□ -1.68
FAT1	YBR041W	BOI2	P39969	1040 aa		4.56	□□□□□ -1.68
FAT1	YBR041W	MRP7	P12687	371 aa		4.56	□□□□□ -1.68
FAT1	YBR041W	GCR2	Q01722	534 aa		4.56	□□□□□ -1.68
FAT1	YBR041W	RLF2	Q12495	606 aa		4.56	□□□□□ -1.68
FAT1	YBR041W	YBR287W	P38355	427 aa		4.55	□□□□□ -1.68
FAT1	YBR041W	RAD4	P14736	754 aa		4.55	□□□□□ -1.68
FAT1	YBR041W	MSP1	P28737	362 aa		4.55	□□□□□ -1.68
FAT1	YBR041W	NMD2	P38798	1089 aa	Known RBP	4.55	□□□□□ -1.68
FAT1	YBR041W	SWI1	P09547	1314 aa		4.54	□□□□□ -1.68
FAT1	YBR041W	DLD1	P32891	587 aa		4.54	□□□□□ -1.68
FAT1	YBR041W	CST6	P40535	587 aa		4.53	□□□□□ -1.68
FAT1	YBR041W	YGR122W	P53272	402 aa		4.53	□□□□□ -1.68
FAT1	YBR041W	BRN1	P38170	754 aa		4.53	□□□□□ -1.68
FAT1	YBR041W	RPN1	P38764	993 aa	Known RBP	4.53	□□□□□ -1.68
FAT1	YBR041W	SET1	P38827	1080 aa	Known RBP	4.53	□□□□□ -1.68
FAT1	YBR041W	ADE16	P54113	591 aa	Known RBP	4.53	□□□□□ -1.68
FAT1	YBR041W	DNM1	P54861	757 aa		4.53	□□□□□ -1.68
FAT1	YBR041W	MEC3	Q02574	474 aa		4.53	□□□□□ -1.68
FAT1	YBR041W	OSM1	P21375	501 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms