RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene ROX3, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX3YBL093C RTF1P53064 558 aa8.06□□□□□ -1.12
ROX3YBL093C HST2P53686 357 aa8.06□□□□□ -1.12
ROX3YBL093C PDR15Q04182 1529 aaKnown RBP8.06□□□□□ -1.12
ROX3YBL093C STH1P32597 1359 aa8.06□□□□□ -1.12
ROX3YBL093C GLN1P32288 370 aaKnown RBP8.05□□□□□ -1.12
ROX3YBL093C XDJ1P39102 459 aa8.05□□□□□ -1.12
ROX3YBL093C SAS4Q04003 481 aa8.05□□□□□ -1.12
ROX3YBL093C ERF2Q06551 359 aa8.05□□□□□ -1.12
ROX3YBL093C MMP1Q12372 583 aa8.05□□□□□ -1.12
ROX3YBL093C TYW1Q08960 810 aaKnown RBP8.04□□□□□ -1.12
ROX3YBL093C SNT2P53127 1403 aa8.03□□□□□ -1.12
ROX3YBL093C SEC2P17065 759 aa8.03□□□□□ -1.12
ROX3YBL093C SLY41P22215 453 aa8.03□□□□□ -1.12
ROX3YBL093C SCJ1P25303 377 aa8.03□□□□□ -1.12
ROX3YBL093C GUA1P38625 525 aaKnown RBP8.03□□□□□ -1.12
ROX3YBL093C TRM732Q03496 1420 aa8.03□□□□□ -1.12
ROX3YBL093C TY1A-DR4O74302 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-HP0C2I4 478 aaKnown RBP8.01□□□□□ -1.13
ROX3YBL093C TY1A-AP0CX57 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-PR1P0CX58 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-ORP0CX59 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-PR2P0CX60 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-DR5P0CX65 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-ER2P0CX66 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-GR3P0CX67 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-LR1P0CX68 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-MR2P0CX69 440 aa8.01□□□□□ -1.13
ROX3YBL093C SSA2P10592 639 aaKnown RBP8.01□□□□□ -1.13
ROX3YBL093C TY1A-JR2P47099 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-DR1Q03856 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-ML1Q04706 440 aaKnown RBP8.01□□□□□ -1.13
ROX3YBL093C TAF7Q05021 590 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-BRQ12217 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-NL2Q12470 440 aa8.01□□□□□ -1.13
ROX3YBL093C TY1A-GR2Q12485 440 aa8.01□□□□□ -1.13
ROX3YBL093C YRF1-1P0CX20 1796 aa8.01□□□□□ -1.13
ROX3YBL093C YRF1-5P0CX21 1796 aa8.01□□□□□ -1.13
ROX3YBL093C YRF1-8P0CX22 1796 aa8.01□□□□□ -1.13
ROX3YBL093C PAT1P25644 796 aaKnown RBP8□□□□□ -1.13
ROX3YBL093C ESS1P22696 170 aa7.99□□□□□ -1.13
ROX3YBL093C SPT16P32558 1035 aaKnown RBP7.99□□□□□ -1.13
ROX3YBL093C KTR1P27810 393 aaKnown RBP7.98□□□□□ -1.13
ROX3YBL093C MRF1P30775 413 aaPredicted RBP7.97□□□□□ -1.13
ROX3YBL093C MET5P47169 1442 aa7.96□□□□□ -1.13
ROX3YBL093C RRN7P40992 514 aa7.96□□□□□ -1.14
ROX3YBL093C NUP159P40477 1460 aa7.95□□□□□ -1.14
ROX3YBL093C PUS6P53294 404 aa7.95□□□□□ -1.14
ROX3YBL093C TUB4P53378 473 aa7.95□□□□□ -1.14
ROX3YBL093C HPC2Q01448 625 aa7.95□□□□□ -1.14
ROX3YBL093C PKH3Q03306 898 aaPredicted RBP7.95□□□□□ -1.14
ROX3YBL093C IRC20Q06554 1556 aa7.95□□□□□ -1.14
ROX3YBL093C GEA1P47102 1408 aaPredicted RBP7.95□□□□□ -1.14
ROX3YBL093C TY3B-GQ99315 1547 aa7.94□□□□□ -1.14
ROX3YBL093C GEA2P39993 1459 aaKnown RBP7.94□□□□□ -1.14
ROX3YBL093C YBT1P32386 1661 aa7.93□□□□□ -1.14
ROX3YBL093C YJU3P28321 313 aa7.93□□□□□ -1.14
ROX3YBL093C ERG12P07277 443 aa7.92□□□□□ -1.14
ROX3YBL093C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
ROX3YBL093C TBF1Q02457 562 aa7.92□□□□□ -1.14
ROX3YBL093C AGE1Q04412 482 aa7.92□□□□□ -1.14
ROX3YBL093C ARG8P18544 423 aa7.91□□□□□ -1.14
ROX3YBL093C HGH1P48362 394 aaKnown RBP7.91□□□□□ -1.14
ROX3YBL093C NUP170P38181 1502 aa7.91□□□□□ -1.14
ROX3YBL093C TRM1P15565 570 aaKnown RBP7.9□□□□□ -1.14
ROX3YBL093C BRL1P38770 471 aa7.9□□□□□ -1.14
ROX3YBL093C LAM6Q08001 693 aa7.9□□□□□ -1.14
ROX3YBL093C SPO14P36126 1683 aa7.89□□□□□ -1.15
ROX3YBL093C PAC1P39946 494 aaKnown RBP7.89□□□□□ -1.15
ROX3YBL093C KXD1P53158 218 aa7.88□□□□□ -1.15
ROX3YBL093C TFB3Q03290 321 aa7.88□□□□□ -1.15
ROX3YBL093C RAD59Q12223 238 aa7.88□□□□□ -1.15
ROX3YBL093C PDR12Q02785 1511 aa7.88□□□□□ -1.15
ROX3YBL093C YEL077CQ3E7X8 1277 aa7.87□□□□□ -1.15
ROX3YBL093C VPS15P22219 1454 aa7.87□□□□□ -1.15
ROX3YBL093C IKI3Q06706 1349 aaKnown RBP7.86□□□□□ -1.15
ROX3YBL093C SDH2P21801 266 aa7.86□□□□□ -1.15
ROX3YBL093C RSC30P38781 883 aa7.86□□□□□ -1.15
ROX3YBL093C DMA2P53924 522 aa7.86□□□□□ -1.15
ROX3YBL093C GDB1Q06625 1536 aa7.84□□□□□ -1.15
ROX3YBL093C RTT106P40161 455 aa7.84□□□□□ -1.15
ROX3YBL093C YDL206WQ12424 762 aa7.84□□□□□ -1.15
ROX3YBL093C RPA14P50106 137 aa7.83□□□□□ -1.16
ROX3YBL093C ALR1Q08269 859 aa7.83□□□□□ -1.16
ROX3YBL093C CAT8P39113 1433 aa7.83□□□□□ -1.16
ROX3YBL093C DPS1P04802 557 aaKnown RBP7.82□□□□□ -1.16
ROX3YBL093C AMS1P22855 1083 aa7.82□□□□□ -1.16
ROX3YBL093C PDR10P51533 1564 aa7.82□□□□□ -1.16
ROX3YBL093C YPR097WQ06839 1073 aa7.82□□□□□ -1.16
ROX3YBL093C MET10P39692 1035 aa7.81□□□□□ -1.16
ROX3YBL093C PDC1P06169 563 aaKnown RBP7.8□□□□□ -1.16
ROX3YBL093C PKC1P24583 1151 aa7.8□□□□□ -1.16
ROX3YBL093C YBL036CP38197 257 aa7.8□□□□□ -1.16
ROX3YBL093C HXT10P43581 546 aa7.8□□□□□ -1.16
ROX3YBL093C MOD5P07884 428 aa7.79□□□□□ -1.16
ROX3YBL093C CSE4P36012 229 aa7.79□□□□□ -1.16
ROX3YBL093C ARO1P08566 1588 aaKnown RBP7.79□□□□□ -1.16
ROX3YBL093C RAS1P01119 309 aa7.78□□□□□ -1.16
ROX3YBL093C CST6P40535 587 aa7.78□□□□□ -1.16
ROX3YBL093C BDP1P46678 594 aa7.78□□□□□ -1.16
ROX3YBL093C FRK1Q03002 865 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms