RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeastyeast

Gene SYN8, Length 768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYN8YAL014C GTT3P39996 337 aa7.66□□□□□ -1.18
SYN8YAL014C REF2P42073 533 aaPredicted RBP7.66□□□□□ -1.18
SYN8YAL014C YNR021WP53723 404 aaKnown RBP7.66□□□□□ -1.18
SYN8YAL014C LAM6Q08001 693 aa7.66□□□□□ -1.18
SYN8YAL014C KIN1P13185 1064 aa7.65□□□□□ -1.18
SYN8YAL014C NSR1P27476 414 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18 RIP-Chip
SYN8YAL014C COBP00163 385 aa7.64□□□□□ -1.19
SYN8YAL014C SIS1P25294 352 aaKnown RBP7.64□□□□□ -1.19
SYN8YAL014C YAP5P40574 245 aa7.64□□□□□ -1.19
SYN8YAL014C CTH1P47976 325 aa7.64□□□□□ -1.19
SYN8YAL014C SLM3Q12093 417 aa7.64□□□□□ -1.19
SYN8YAL014C MAM3Q12296 706 aa7.64□□□□□ -1.19
SYN8YAL014C CSE4P36012 229 aa7.63□□□□□ -1.19
SYN8YAL014C YKL133CP36066 463 aa7.63□□□□□ -1.19
SYN8YAL014C ENP1P38333 483 aaKnown RBP7.63□□□□□ -1.19
SYN8YAL014C YRF1-4O13559 1382 aa7.62□□□□□ -1.19
SYN8YAL014C GLC3P32775 704 aa7.62□□□□□ -1.19
SYN8YAL014C YEF3P16521 1044 aaKnown RBP7.61□□□□□ -1.19
SYN8YAL014C DIT2P21595 489 aa7.61□□□□□ -1.19
SYN8YAL014C PTC3P34221 468 aaKnown RBP7.61□□□□□ -1.19
SYN8YAL014C NUP42P49686 430 aaKnown RBP7.61□□□□□ -1.19
SYN8YAL014C YRF1-3P0CX14 1859 aa7.6□□□□□ -1.19
SYN8YAL014C YRF1-7P0CX15 1859 aa7.6□□□□□ -1.19
SYN8YAL014C YRF1-6P53819 1859 aa7.6□□□□□ -1.19
SYN8YAL014C RPS24AP0CX31 135 aaKnown RBP7.6□□□□□ -1.19
SYN8YAL014C RPS24BP0CX32 135 aaKnown RBP7.6□□□□□ -1.19
SYN8YAL014C SPE2P21182 396 aa7.6□□□□□ -1.19
SYN8YAL014C RRD1P40454 393 aaKnown RBP7.6□□□□□ -1.19
SYN8YAL014C XKS1P42826 600 aa7.6□□□□□ -1.19
SYN8YAL014C YKR075CP36155 307 aa7.59□□□□□ -1.19
SYN8YAL014C KIP3P53086 805 aaKnown RBP7.59□□□□□ -1.19
SYN8YAL014C LEU2P04173 364 aaPredicted RBP7.57□□□□□ -1.2
SYN8YAL014C AIM7Q12156 149 aa7.57□□□□□ -1.2
SYN8YAL014C YIL177CP40434 1758 aa7.56□□□□□ -1.2
SYN8YAL014C YJL225CP40889 1758 aa7.56□□□□□ -1.2
SYN8YAL014C MTR4P47047 1073 aaKnown RBP7.56□□□□□ -1.2
SYN8YAL014C PIB1Q06651 286 aa7.56□□□□□ -1.2
SYN8YAL014C RLF2Q12495 606 aa7.56□□□□□ -1.2
SYN8YAL014C APC1P53886 1748 aa7.55□□□□□ -1.2
SYN8YAL014C COX6P00427 148 aa7.55□□□□□ -1.2
SYN8YAL014C FRK1Q03002 865 aaPredicted RBP7.55□□□□□ -1.2
SYN8YAL014C PRP43P53131 767 aaKnown RBP7.54□□□□□ -1.2
SYN8YAL014C CHZ1P40019 153 aaPredicted RBP7.53□□□□□ -1.2
SYN8YAL014C MAK21Q12176 1025 aaKnown RBP7.53□□□□□ -1.2
SYN8YAL014C ALD3P54114 506 aa7.52□□□□□ -1.21
SYN8YAL014C SPT7P35177 1332 aa7.52□□□□□ -1.21
SYN8YAL014C SNF2P22082 1703 aa7.5□□□□□ -1.21
SYN8YAL014C MST1P07236 462 aa7.5□□□□□ -1.21
SYN8YAL014C VMA1P17255 1071 aaKnown RBP7.5□□□□□ -1.21
SYN8YAL014C ORC1P54784 914 aaPredicted RBP7.5□□□□□ -1.21
SYN8YAL014C YDR090CQ03193 310 aa7.5□□□□□ -1.21
SYN8YAL014C DPS1P04802 557 aaKnown RBP7.49□□□□□ -1.21
SYN8YAL014C UBP14P38237 781 aaKnown RBP7.49□□□□□ -1.21
SYN8YAL014C GUA1P38625 525 aaKnown RBP7.49□□□□□ -1.21
SYN8YAL014C VHR2P40041 505 aa7.49□□□□□ -1.21
SYN8YAL014C EAF6P47128 113 aa7.49□□□□□ -1.21
SYN8YAL014C MEC3Q02574 474 aa7.49□□□□□ -1.21
SYN8YAL014C YLR419WQ06698 1435 aaKnown RBP7.49□□□□□ -1.21
SYN8YAL014C ADE16P54113 591 aaKnown RBP7.48□□□□□ -1.21
SYN8YAL014C ATH1P48016 1211 aa7.47□□□□□ -1.21
SYN8YAL014C GAS4Q08271 471 aa7.47□□□□□ -1.21
SYN8YAL014C MSB4Q12317 492 aa7.47□□□□□ -1.21
SYN8YAL014C YML133CQ03099 1374 aa7.46□□□□□ -1.21
SYN8YAL014C YLL067CQ07888 1374 aa7.46□□□□□ -1.21
SYN8YAL014C YLL066CQ99208 1374 aa7.46□□□□□ -1.21
SYN8YAL014C YLR326WQ06170 240 aaKnown RBP7.46□□□□□ -1.22
SYN8YAL014C GRE2Q12068 342 aaKnown RBP7.46□□□□□ -1.22
SYN8YAL014C BUG1Q12191 341 aa7.46□□□□□ -1.22
SYN8YAL014C ATF2P53296 535 aa7.45□□□□□ -1.22
SYN8YAL014C SIR4P11978 1358 aa7.45□□□□□ -1.22
SYN8YAL014C RIM15P43565 1770 aa7.44□□□□□ -1.22
SYN8YAL014C SAP155P43612 1002 aa7.44□□□□□ -1.22
SYN8YAL014C MSN5P52918 1224 aa7.44□□□□□ -1.22
SYN8YAL014C ATG13Q06628 738 aa7.44□□□□□ -1.22
SYN8YAL014C GUT1P32190 709 aa7.43□□□□□ -1.22
SYN8YAL014C HPC2Q01448 625 aa7.43□□□□□ -1.22
SYN8YAL014C RPO41P13433 1351 aaKnown RBP7.43□□□□□ -1.22
SYN8YAL014C SQS1P53866 767 aaKnown RBP7.42□□□□□ -1.22
SYN8YAL014C SAM3Q08986 587 aa7.42□□□□□ -1.22
SYN8YAL014C SOL3P38858 249 aa7.41□□□□□ -1.22
SYN8YAL014C YER156CP40093 338 aaKnown RBP7.41□□□□□ -1.22
SYN8YAL014C RTF1P53064 558 aa7.41□□□□□ -1.22
SYN8YAL014C TOS1P38288 455 aa7.4□□□□□ -1.22
SYN8YAL014C YGR273CP53329 174 aa7.4□□□□□ -1.22
SYN8YAL014C GYP5Q12344 894 aa7.4□□□□□ -1.22
SYN8YAL014C YBL029C-AQ3E756 94 aa7.4□□□□□ -1.22
SYN8YAL014C PDI1P17967 522 aaKnown RBP7.39□□□□□ -1.23
SYN8YAL014C RAD4P14736 754 aa7.38□□□□□ -1.23
SYN8YAL014C HGH1P48362 394 aaKnown RBP7.38□□□□□ -1.23
SYN8YAL014C UTP22P53254 1237 aaPredicted RBP7.38□□□□□ -1.23
SYN8YAL014C RIX7Q07844 837 aaKnown RBP7.38□□□□□ -1.23
SYN8YAL014C SSA4P22202 642 aaKnown RBP7.37□□□□□ -1.23
SYN8YAL014C GRX1P25373 110 aaKnown RBP7.37□□□□□ -1.23
SYN8YAL014C CTT1P06115 562 aa7.36□□□□□ -1.23
SYN8YAL014C KEX1P09620 729 aa7.36□□□□□ -1.23
SYN8YAL014C PCS60P38137 543 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SYN8YAL014C TFB3Q03290 321 aa7.36□□□□□ -1.23
SYN8YAL014C MHP1P43638 1398 aa7.35□□□□□ -1.23
SYN8YAL014C RAD54P32863 898 aa7.35□□□□□ -1.23
SYN8YAL014C KIC1P38692 1080 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms