RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 UNC13BO14795 1591 aa30.01■■■□□ 2.39
CROCCP2-207ENST00000640476 DEPDC5O75140 1603 aa30.01■■■□□ 2.39
CROCCP2-207ENST00000640476 NUP155O75694 1391 aa30■■■□□ 2.39
CROCCP2-207ENST00000640476 ARID4BQ4LE39 1312 aaPredicted RBP30■■■□□ 2.39
CROCCP2-207ENST00000640476 HRCP23327 699 aa30■■■□□ 2.39
CROCCP2-207ENST00000640476 BCORL1Q5H9F3 1711 aa29.99■■■□□ 2.39
CROCCP2-207ENST00000640476 RNF17Q9BXT8 1623 aaKnown RBP29.98■■■□□ 2.39
CROCCP2-207ENST00000640476 PZPP20742 1482 aa29.97■■■□□ 2.39
CROCCP2-207ENST00000640476 AGLP35573 1532 aa29.95■■■□□ 2.38
CROCCP2-207ENST00000640476 DHX57Q6P158 1386 aaKnown RBP29.94■■■□□ 2.38
CROCCP2-207ENST00000640476 FOXD1Q16676 465 aa29.94■■■□□ 2.38
CROCCP2-207ENST00000640476 CEP152O94986 1710 aa29.93■■■□□ 2.38
CROCCP2-207ENST00000640476 PRDM15P57071 1507 aaPredicted RBP29.93■■■□□ 2.38
CROCCP2-207ENST00000640476 MPHOSPH9Q99550 1183 aa29.91■■■□□ 2.38
CROCCP2-207ENST00000640476 FAM135AQ9P2D6 1515 aa29.91■■■□□ 2.38
CROCCP2-207ENST00000640476 IQGAP3Q86VI3 1631 aa29.9■■■□□ 2.38
CROCCP2-207ENST00000640476 SLC4A1APQ9BWU0 796 aaKnown RBP29.9■■■□□ 2.38
CROCCP2-207ENST00000640476 KDM5DQ9BY66 1539 aa29.88■■■□□ 2.37
CROCCP2-207ENST00000640476 CFAP65Q6ZU64 1925 aaKnown RBP29.88■■■□□ 2.37
CROCCP2-207ENST00000640476 VWDEQ8N2E2 1590 aa29.88■■■□□ 2.37
CROCCP2-207ENST00000640476 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
CROCCP2-207ENST00000640476 WASHC2CQ9Y4E1 1318 aa29.83■■■□□ 2.37
CROCCP2-207ENST00000640476 PKD2Q13563 968 aa29.82■■■□□ 2.36
CROCCP2-207ENST00000640476 ABCC3O15438 1527 aa29.82■■■□□ 2.36
CROCCP2-207ENST00000640476 KANK1Q14678 1352 aa29.81■■■□□ 2.36
CROCCP2-207ENST00000640476 CLTCQ00610 1675 aaKnown RBP29.81■■■□□ 2.36
CROCCP2-207ENST00000640476 E9PCH4 1651 aa29.79■■■□□ 2.36
CROCCP2-207ENST00000640476 TET3O43151 1660 aa29.77■■■□□ 2.36
CROCCP2-207ENST00000640476 CAMSAP1Q5T5Y3 1602 aa29.75■■■□□ 2.35
CROCCP2-207ENST00000640476 FER1L4A9Z1Z3 1794 aa29.73■■■□□ 2.35
CROCCP2-207ENST00000640476 EFCAB6Q5THR3 1501 aa29.72■■■□□ 2.35
CROCCP2-207ENST00000640476 LMTK2Q8IWU2 1503 aa29.72■■■□□ 2.35
CROCCP2-207ENST00000640476 ZC3H13Q5T200 1668 aaKnown RBP29.71■■■□□ 2.35
CROCCP2-207ENST00000640476 MADDQ8WXG6 1647 aa29.7■■■□□ 2.34
CROCCP2-207ENST00000640476 ACIN1Q9UKV3 1341 aaKnown RBP29.69■■■□□ 2.34
CROCCP2-207ENST00000640476 NPATQ14207 1427 aa29.69■■■□□ 2.34
CROCCP2-207ENST00000640476 SIN3AQ96ST3 1273 aa29.68■■■□□ 2.34
CROCCP2-207ENST00000640476 PLPPR3Q6T4P5 718 aa29.67■■■□□ 2.34
CROCCP2-207ENST00000640476 ADAMTSL3P82987 1691 aa29.66■■■□□ 2.34
CROCCP2-207ENST00000640476 FBXO31Q5XUX0 539 aaPredicted RBP29.65■■■□□ 2.34
CROCCP2-207ENST00000640476 ESF1Q9H501 851 aaKnown RBP29.65■■■□□ 2.34
CROCCP2-207ENST00000640476 PLA2R1Q13018 1463 aa29.65■■■□□ 2.34
CROCCP2-207ENST00000640476 CEBPAP49715 358 aaPredicted RBP29.64■■■□□ 2.34
CROCCP2-207ENST00000640476 RIMS1Q86UR5 1692 aaKnown RBP29.64■■■□□ 2.34
CROCCP2-207ENST00000640476 PPP6R1Q9UPN7 881 aa29.64■■■□□ 2.34
CROCCP2-207ENST00000640476 ANKRD30BQ9BXX2 1392 aa29.63■■■□□ 2.33
CROCCP2-207ENST00000640476 ZMYM3Q14202 1370 aa29.63■■■□□ 2.33
CROCCP2-207ENST00000640476 SPHKAPQ2M3C7 1700 aa29.6■■■□□ 2.33
CROCCP2-207ENST00000640476 NEUROD1Q13562 356 aa29.59■■■□□ 2.33
CROCCP2-207ENST00000640476 C3P01024 1663 aa29.59■■■□□ 2.33
CROCCP2-207ENST00000640476 UGGT1Q9NYU2 1555 aa29.58■■■□□ 2.33
CROCCP2-207ENST00000640476 PREX1Q8TCU6 1659 aa29.57■■■□□ 2.32
CROCCP2-207ENST00000640476 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
CROCCP2-207ENST00000640476 ARHGAP31Q2M1Z3 1444 aa29.56■■■□□ 2.32
CROCCP2-207ENST00000640476 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
CROCCP2-207ENST00000640476 SYNMO15061 1565 aa29.53■■■□□ 2.32
CROCCP2-207ENST00000640476 PTPRTO14522 1441 aa29.53■■■□□ 2.32
CROCCP2-207ENST00000640476 RPRD2Q5VT52 1461 aaKnown RBP29.52■■■□□ 2.32
CROCCP2-207ENST00000640476 KDM4FA0A1W2PPD8 638 aa29.52■■■□□ 2.32
CROCCP2-207ENST00000640476 CLTCL1P53675 1640 aa29.5■■■□□ 2.31
CROCCP2-207ENST00000640476 NOS1P29475 1434 aa29.49■■■□□ 2.31
CROCCP2-207ENST00000640476 ERVK-7P63135 1459 aa29.49■■■□□ 2.31
CROCCP2-207ENST00000640476 TRPM2O94759 1503 aa29.49■■■□□ 2.31
CROCCP2-207ENST00000640476 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.31
CROCCP2-207ENST00000640476 CCDC144AA2RUR9 1427 aa29.44■■■□□ 2.3
CROCCP2-207ENST00000640476 SPATA31D1Q6ZQQ2 1576 aa29.44■■■□□ 2.3
CROCCP2-207ENST00000640476 PTPRMP28827 1452 aa29.42■■■□□ 2.3
CROCCP2-207ENST00000640476 IDI1Q13907 227 aa29.41■■■□□ 2.3
CROCCP2-207ENST00000640476 PIK3C2BO00750 1634 aa29.39■■■□□ 2.3
CROCCP2-207ENST00000640476 MYO5BQ9ULV0 1848 aa29.39■■■□□ 2.29
CROCCP2-207ENST00000640476 RGL3Q3MIN7 710 aa29.36■■■□□ 2.29
CROCCP2-207ENST00000640476 TNRQ92752 1358 aa29.35■■■□□ 2.29
CROCCP2-207ENST00000640476 KIF1BO60333 1816 aa29.35■■■□□ 2.29
CROCCP2-207ENST00000640476 CHGAP10645 457 aaKnown RBP29.34■■■□□ 2.29
CROCCP2-207ENST00000640476 SPATA31E1Q6ZUB1 1445 aa29.29■■■□□ 2.28
CROCCP2-207ENST00000640476 L3MBTL2Q969R5 705 aa29.29■■■□□ 2.28
CROCCP2-207ENST00000640476 SLC52A1Q9NWF4 448 aa29.29■■■□□ 2.28
CROCCP2-207ENST00000640476 SETD1BQ9UPS6 1966 aaKnown RBP29.27■■■□□ 2.28
CROCCP2-207ENST00000640476 TMEM131LA2VDJ0 1609 aa29.27■■■□□ 2.28
CROCCP2-207ENST00000640476 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
CROCCP2-207ENST00000640476 MYO3AQ8NEV4 1616 aa29.26■■■□□ 2.27
CROCCP2-207ENST00000640476 ADGRB3O60242 1522 aa29.24■■■□□ 2.27
CROCCP2-207ENST00000640476 NUTM2DQ5VT03 806 aaPredicted RBP29.21■■■□□ 2.27
CROCCP2-207ENST00000640476 KDM2AQ9Y2K7 1162 aa29.21■■■□□ 2.27
CROCCP2-207ENST00000640476 UBR1Q8IWV7 1749 aa29.21■■■□□ 2.27
CROCCP2-207ENST00000640476 ZNF326Q5BKZ1 582 aaKnown RBP29.21■■■□□ 2.27
CROCCP2-207ENST00000640476 STAG3Q9UJ98 1225 aa29.2■■■□□ 2.26
CROCCP2-207ENST00000640476 DCAF11Q8TEB1 546 aa29.19■■■□□ 2.26
CROCCP2-207ENST00000640476 SENP3Q9H4L4 574 aaPredicted RBP29.19■■■□□ 2.26
CROCCP2-207ENST00000640476 A2ML1A8K2U0 1454 aa29.18■■■□□ 2.26
CROCCP2-207ENST00000640476 NLRP1Q9C000 1473 aa29.16■■■□□ 2.26
CROCCP2-207ENST00000640476 CEP170BQ9Y4F5 1589 aaPredicted RBP29.15■■■□□ 2.26
CROCCP2-207ENST00000640476 IFT172Q9UG01 1749 aa29.14■■■□□ 2.25
CROCCP2-207ENST00000640476 PPLO60437 1756 aa29.13■■■□□ 2.25
CROCCP2-207ENST00000640476 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
CROCCP2-207ENST00000640476 NEURL4Q96JN8 1562 aa29.1■■■□□ 2.25
CROCCP2-207ENST00000640476 NEXMIFQ5QGS0 1516 aa29.1■■■□□ 2.25
CROCCP2-207ENST00000640476 NBPF8Q3BBV2 869 aa29.1■■■□□ 2.25
CROCCP2-207ENST00000640476 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
CROCCP2-207ENST00000640476 ADGRF5Q8IZF2 1346 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms