RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
SPIN3-232ENST00000639956 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
SPIN3-232ENST00000639956 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
SPIN3-232ENST00000639956 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
SPIN3-232ENST00000639956 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
SPIN3-232ENST00000639956 RALBP1Q15311 655 aa16.67■□□□□ 0.26
SPIN3-232ENST00000639956 ABCC10Q5T3U5 1492 aa16.66■□□□□ 0.26
SPIN3-232ENST00000639956 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
SPIN3-232ENST00000639956 ADGBQ8N7X0 1667 aa16.66■□□□□ 0.26
SPIN3-232ENST00000639956 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
SPIN3-232ENST00000639956 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
SPIN3-232ENST00000639956 CDC42BPAQ5VT25 1732 aa16.65■□□□□ 0.26
SPIN3-232ENST00000639956 NUP160Q12769 1436 aa16.65■□□□□ 0.26
SPIN3-232ENST00000639956 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
SPIN3-232ENST00000639956 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-232ENST00000639956 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
SPIN3-232ENST00000639956 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
SPIN3-232ENST00000639956 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-232ENST00000639956 BRD4O60885 1362 aaPredicted RBP16.61■□□□□ 0.25
SPIN3-232ENST00000639956 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
SPIN3-232ENST00000639956 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
SPIN3-232ENST00000639956 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-232ENST00000639956 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
SPIN3-232ENST00000639956 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
SPIN3-232ENST00000639956 TESK2Q96S53 571 aa16.59■□□□□ 0.25
SPIN3-232ENST00000639956 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
SPIN3-232ENST00000639956 ABCA8O94911 1581 aa16.58■□□□□ 0.25
SPIN3-232ENST00000639956 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.25
SPIN3-232ENST00000639956 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.25
SPIN3-232ENST00000639956 AFAP1Q8N556 730 aa16.58■□□□□ 0.24
SPIN3-232ENST00000639956 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-232ENST00000639956 LRPPRCP42704 1394 aaKnown RBP16.58■□□□□ 0.24
SPIN3-232ENST00000639956 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
SPIN3-232ENST00000639956 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.24
SPIN3-232ENST00000639956 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
SPIN3-232ENST00000639956 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
SPIN3-232ENST00000639956 TMF1P82094 1093 aa16.57■□□□□ 0.24
SPIN3-232ENST00000639956 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
SPIN3-232ENST00000639956 CRBNQ96SW2 442 aa16.56■□□□□ 0.24
SPIN3-232ENST00000639956 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
SPIN3-232ENST00000639956 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
SPIN3-232ENST00000639956 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
SPIN3-232ENST00000639956 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
SPIN3-232ENST00000639956 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
SPIN3-232ENST00000639956 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
SPIN3-232ENST00000639956 A2MP01023 1474 aa16.54■□□□□ 0.24
SPIN3-232ENST00000639956 SHANK2Q9UPX8 1470 aa16.53■□□□□ 0.24
SPIN3-232ENST00000639956 KNSTRNQ9Y448 316 aa16.53■□□□□ 0.24
SPIN3-232ENST00000639956 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
SPIN3-232ENST00000639956 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.23
SPIN3-232ENST00000639956 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
SPIN3-232ENST00000639956 PDE4AP27815 886 aa16.51■□□□□ 0.23
SPIN3-232ENST00000639956 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPIN3-232ENST00000639956 KDM5DQ9BY66 1539 aa16.5■□□□□ 0.23
SPIN3-232ENST00000639956 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
SPIN3-232ENST00000639956 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
SPIN3-232ENST00000639956 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
SPIN3-232ENST00000639956 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-232ENST00000639956 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
SPIN3-232ENST00000639956 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
SPIN3-232ENST00000639956 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
SPIN3-232ENST00000639956 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
SPIN3-232ENST00000639956 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
SPIN3-232ENST00000639956 RTL5Q5HYW3 569 aaPredicted RBP16.46■□□□□ 0.23
SPIN3-232ENST00000639956 KIF3BO15066 747 aa16.45■□□□□ 0.22
SPIN3-232ENST00000639956 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
SPIN3-232ENST00000639956 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
SPIN3-232ENST00000639956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPIN3-232ENST00000639956 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
SPIN3-232ENST00000639956 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
SPIN3-232ENST00000639956 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
SPIN3-232ENST00000639956 RGS3P49796 1198 aa16.43■□□□□ 0.22
SPIN3-232ENST00000639956 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
SPIN3-232ENST00000639956 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
SPIN3-232ENST00000639956 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
SPIN3-232ENST00000639956 TRPM1Q7Z4N2 1603 aa16.42■□□□□ 0.22
SPIN3-232ENST00000639956 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
SPIN3-232ENST00000639956 APAF1O14727 1248 aa16.41■□□□□ 0.22
SPIN3-232ENST00000639956 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
SPIN3-232ENST00000639956 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
SPIN3-232ENST00000639956 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
SPIN3-232ENST00000639956 MAGI2Q86UL8 1455 aa16.4■□□□□ 0.22
SPIN3-232ENST00000639956 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
SPIN3-232ENST00000639956 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
SPIN3-232ENST00000639956 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
SPIN3-232ENST00000639956 BCAR3O75815 825 aa16.37■□□□□ 0.21
SPIN3-232ENST00000639956 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
SPIN3-232ENST00000639956 NEFMP07197 916 aa16.37■□□□□ 0.21
SPIN3-232ENST00000639956 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
SPIN3-232ENST00000639956 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
SPIN3-232ENST00000639956 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
SPIN3-232ENST00000639956 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
SPIN3-232ENST00000639956 E9PCH4 1651 aa16.35■□□□□ 0.21
SPIN3-232ENST00000639956 TRAK1Q9UPV9 953 aa16.34■□□□□ 0.21
SPIN3-232ENST00000639956 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
SPIN3-232ENST00000639956 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
SPIN3-232ENST00000639956 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
SPIN3-232ENST00000639956 CHD1O14646 1710 aa16.32■□□□□ 0.2
SPIN3-232ENST00000639956 PLCH2O75038 1416 aa16.32■□□□□ 0.2
SPIN3-232ENST00000639956 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms