RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 WDR43Q15061 677 aaKnown RBP eCLIP10.2□□□□□ -0.78
NECAP1-221ENST00000639955 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
NECAP1-221ENST00000639955 DISP1Q96F81 1524 aa10.2□□□□□ -0.78
NECAP1-221ENST00000639955 PBRM1Q86U86 1689 aa10.2□□□□□ -0.78
NECAP1-221ENST00000639955 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
NECAP1-221ENST00000639955 GPATCH8Q9UKJ3 1502 aaKnown RBP10.2□□□□□ -0.78
NECAP1-221ENST00000639955 MRC2Q9UBG0 1479 aa10.2□□□□□ -0.78
NECAP1-221ENST00000639955 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
NECAP1-221ENST00000639955 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-221ENST00000639955 ADAMTS12P58397 1594 aa10.19□□□□□ -0.78
NECAP1-221ENST00000639955 NEFMP07197 916 aa10.19□□□□□ -0.78
NECAP1-221ENST00000639955 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
NECAP1-221ENST00000639955 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
NECAP1-221ENST00000639955 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
NECAP1-221ENST00000639955 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
NECAP1-221ENST00000639955 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
NECAP1-221ENST00000639955 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
NECAP1-221ENST00000639955 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
NECAP1-221ENST00000639955 ROCK1Q13464 1354 aa10.18□□□□□ -0.78
NECAP1-221ENST00000639955 KIAA0586Q9BVV6 1533 aa10.18□□□□□ -0.78
NECAP1-221ENST00000639955 CCDC144AA2RUR9 1427 aa10.17□□□□□ -0.78
NECAP1-221ENST00000639955 SMG6Q86US8 1419 aaKnown RBP10.17□□□□□ -0.78
NECAP1-221ENST00000639955 PDE4AP27815 886 aa10.17□□□□□ -0.78
NECAP1-221ENST00000639955 ERICH6BQ5W0A0 696 aa10.17□□□□□ -0.78
NECAP1-221ENST00000639955 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
NECAP1-221ENST00000639955 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
NECAP1-221ENST00000639955 CANXP27824 592 aaKnown RBP10.17□□□□□ -0.78
NECAP1-221ENST00000639955 KIAA0556O60303 1618 aa10.16□□□□□ -0.78
NECAP1-221ENST00000639955 RAPGEF6Q8TEU7 1601 aa10.16□□□□□ -0.78
NECAP1-221ENST00000639955 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
NECAP1-221ENST00000639955 RRP7AQ9Y3A4 280 aaKnown RBP10.16□□□□□ -0.78
NECAP1-221ENST00000639955 DNMT1P26358 1616 aaKnown RBP10.15□□□□□ -0.78
NECAP1-221ENST00000639955 RALBP1Q15311 655 aa10.15□□□□□ -0.78
NECAP1-221ENST00000639955 DISP3Q9P2K9 1392 aa10.15□□□□□ -0.78
NECAP1-221ENST00000639955 TMF1P82094 1093 aa10.15□□□□□ -0.79
NECAP1-221ENST00000639955 AFAP1Q8N556 730 aa10.14□□□□□ -0.79
NECAP1-221ENST00000639955 FRAT1Q92837 279 aaPredicted RBP10.14□□□□□ -0.79
NECAP1-221ENST00000639955 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
NECAP1-221ENST00000639955 BCL2L13Q9BXK5 485 aa10.14□□□□□ -0.79
NECAP1-221ENST00000639955 PTPRGP23470 1445 aa10.13□□□□□ -0.79
NECAP1-221ENST00000639955 IFT140Q96RY7 1462 aa10.12□□□□□ -0.79
NECAP1-221ENST00000639955 APAF1O14727 1248 aa10.11□□□□□ -0.79
NECAP1-221ENST00000639955 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
NECAP1-221ENST00000639955 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
NECAP1-221ENST00000639955 ATP10BO94823 1461 aa10.1□□□□□ -0.79
NECAP1-221ENST00000639955 A0A0U1RQG5 324 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-221ENST00000639955 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-221ENST00000639955 BRD4O60885 1362 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-221ENST00000639955 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
NECAP1-221ENST00000639955 KIF3BO15066 747 aa10.09□□□□□ -0.79
NECAP1-221ENST00000639955 BCAR3O75815 825 aa10.09□□□□□ -0.79
NECAP1-221ENST00000639955 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
NECAP1-221ENST00000639955 ARHGAP5Q13017 1502 aa10.08□□□□□ -0.8
NECAP1-221ENST00000639955 CFAP70Q5T0N1 1121 aa10.08□□□□□ -0.8
NECAP1-221ENST00000639955 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
NECAP1-221ENST00000639955 TCERG1O14776 1098 aaKnown RBP10.07□□□□□ -0.8
NECAP1-221ENST00000639955 TRAK1Q9UPV9 953 aa10.07□□□□□ -0.8
NECAP1-221ENST00000639955 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-221ENST00000639955 PPP2R1AP30153 589 aa10.06□□□□□ -0.8
NECAP1-221ENST00000639955 KDM5CP41229 1560 aa10.06□□□□□ -0.8
NECAP1-221ENST00000639955 TESK2Q96S53 571 aa10.06□□□□□ -0.8
NECAP1-221ENST00000639955 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
NECAP1-221ENST00000639955 GGT6Q6P531 493 aa10.06□□□□□ -0.8
NECAP1-221ENST00000639955 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-221ENST00000639955 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 COG6Q9Y2V7 657 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 TMEM132EQ6IEE7 984 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-221ENST00000639955 DMRT2Q9Y5R5 561 aa10.05□□□□□ -0.8
NECAP1-221ENST00000639955 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
NECAP1-221ENST00000639955 ERBINQ96RT1 1412 aa10.04□□□□□ -0.8
NECAP1-221ENST00000639955 SYCP2Q9BX26 1530 aa10.04□□□□□ -0.8
NECAP1-221ENST00000639955 SPAG9O60271 1321 aaKnown RBP10.03□□□□□ -0.8
NECAP1-221ENST00000639955 MBD5Q9P267 1494 aa10.03□□□□□ -0.8
NECAP1-221ENST00000639955 STK26Q9P289 416 aa10.03□□□□□ -0.8
NECAP1-221ENST00000639955 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
NECAP1-221ENST00000639955 PRAG1Q86YV5 1406 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 RNF123Q5XPI4 1314 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.81
NECAP1-221ENST00000639955 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-221ENST00000639955 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
NECAP1-221ENST00000639955 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-221ENST00000639955 CCDC141Q6ZP82 1450 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 A2MP01023 1474 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 PDE3BQ13370 1112 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
NECAP1-221ENST00000639955 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
NECAP1-221ENST00000639955 GOLGA6L2Q8N9W4 650 aaPredicted RBP10□□□□□ -0.81
NECAP1-221ENST00000639955 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
NECAP1-221ENST00000639955 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
NECAP1-221ENST00000639955 MORC1Q86VD1 984 aa9.99□□□□□ -0.81
NECAP1-221ENST00000639955 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
NECAP1-221ENST00000639955 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms