RNA–Protein interactions for RNA: ENST00000637438.1

LINC00598-213, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,456 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-213ENST00000637438 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
LINC00598-213ENST00000637438 KDM6BO15054 1643 aa13.49□□□□□ -0.25
LINC00598-213ENST00000637438 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
LINC00598-213ENST00000637438 CCER1Q8TC90 406 aaPredicted RBP13.48□□□□□ -0.25
LINC00598-213ENST00000637438 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
LINC00598-213ENST00000637438 ABCA6Q8N139 1617 aa13.47□□□□□ -0.25
LINC00598-213ENST00000637438 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
LINC00598-213ENST00000637438 UNC13BO14795 1591 aa13.45□□□□□ -0.26
LINC00598-213ENST00000637438 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
LINC00598-213ENST00000637438 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
LINC00598-213ENST00000637438 A2MP01023 1474 aa13.43□□□□□ -0.26
LINC00598-213ENST00000637438 ARHGEF40Q8TER5 1519 aa13.43□□□□□ -0.26
LINC00598-213ENST00000637438 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
LINC00598-213ENST00000637438 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
LINC00598-213ENST00000637438 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
LINC00598-213ENST00000637438 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
LINC00598-213ENST00000637438 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
LINC00598-213ENST00000637438 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
LINC00598-213ENST00000637438 CACNB1Q02641 598 aaPredicted RBP13.41□□□□□ -0.26
LINC00598-213ENST00000637438 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
LINC00598-213ENST00000637438 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
LINC00598-213ENST00000637438 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
LINC00598-213ENST00000637438 IQGAP3Q86VI3 1631 aa13.4□□□□□ -0.27
LINC00598-213ENST00000637438 RNF17Q9BXT8 1623 aaKnown RBP13.4□□□□□ -0.27
LINC00598-213ENST00000637438 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
LINC00598-213ENST00000637438 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
LINC00598-213ENST00000637438 NUP155O75694 1391 aa13.38□□□□□ -0.27
LINC00598-213ENST00000637438 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
LINC00598-213ENST00000637438 ATP10AO60312 1499 aa13.37□□□□□ -0.27
LINC00598-213ENST00000637438 ZEB1P37275 1124 aaPredicted RBP13.37□□□□□ -0.27
LINC00598-213ENST00000637438 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
LINC00598-213ENST00000637438 KANK1Q14678 1352 aa13.36□□□□□ -0.27
LINC00598-213ENST00000637438 PZPP20742 1482 aa13.36□□□□□ -0.27
LINC00598-213ENST00000637438 KIF3BO15066 747 aa13.35□□□□□ -0.27
LINC00598-213ENST00000637438 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
LINC00598-213ENST00000637438 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
LINC00598-213ENST00000637438 AGLP35573 1532 aa13.34□□□□□ -0.27
LINC00598-213ENST00000637438 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
LINC00598-213ENST00000637438 TET3O43151 1660 aa13.33□□□□□ -0.28
LINC00598-213ENST00000637438 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
LINC00598-213ENST00000637438 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
LINC00598-213ENST00000637438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00598-213ENST00000637438 CEP152O94986 1710 aa13.3□□□□□ -0.28
LINC00598-213ENST00000637438 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
LINC00598-213ENST00000637438 PKD2Q13563 968 aa13.28□□□□□ -0.28
LINC00598-213ENST00000637438 EFCAB6Q5THR3 1501 aa13.28□□□□□ -0.28
LINC00598-213ENST00000637438 E9PCH4 1651 aa13.27□□□□□ -0.28
LINC00598-213ENST00000637438 SIGLEC1Q9BZZ2 1709 aa13.26□□□□□ -0.29
LINC00598-213ENST00000637438 ABCC3O15438 1527 aa13.26□□□□□ -0.29
LINC00598-213ENST00000637438 GGT6Q6P531 493 aa13.26□□□□□ -0.29
LINC00598-213ENST00000637438 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
LINC00598-213ENST00000637438 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
LINC00598-213ENST00000637438 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
LINC00598-213ENST00000637438 ANKRD30BQ9BXX2 1392 aa13.24□□□□□ -0.29
LINC00598-213ENST00000637438 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
LINC00598-213ENST00000637438 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
LINC00598-213ENST00000637438 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
LINC00598-213ENST00000637438 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.29
LINC00598-213ENST00000637438 TRPM2O94759 1503 aa13.21□□□□□ -0.29
LINC00598-213ENST00000637438 CCDC144AA2RUR9 1427 aa13.2□□□□□ -0.3
LINC00598-213ENST00000637438 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
LINC00598-213ENST00000637438 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
LINC00598-213ENST00000637438 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
LINC00598-213ENST00000637438 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
LINC00598-213ENST00000637438 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
LINC00598-213ENST00000637438 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
LINC00598-213ENST00000637438 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
LINC00598-213ENST00000637438 NPATQ14207 1427 aa13.18□□□□□ -0.3
LINC00598-213ENST00000637438 CNTLNQ9NXG0 1405 aa13.18□□□□□ -0.3
LINC00598-213ENST00000637438 FER1L4A9Z1Z3 1794 aa13.18□□□□□ -0.3
LINC00598-213ENST00000637438 PTPRTO14522 1441 aa13.17□□□□□ -0.3
LINC00598-213ENST00000637438 MLECQ14165 292 aa13.16□□□□□ -0.3
LINC00598-213ENST00000637438 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
LINC00598-213ENST00000637438 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
LINC00598-213ENST00000637438 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
LINC00598-213ENST00000637438 KCNA4P22459 653 aa13.15□□□□□ -0.3
LINC00598-213ENST00000637438 KIF1BO60333 1816 aa13.15□□□□□ -0.3
LINC00598-213ENST00000637438 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
LINC00598-213ENST00000637438 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
LINC00598-213ENST00000637438 NOS1P29475 1434 aa13.12□□□□□ -0.31
LINC00598-213ENST00000637438 ERVK-7P63135 1459 aa13.11□□□□□ -0.31
LINC00598-213ENST00000637438 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
LINC00598-213ENST00000637438 SYNMO15061 1565 aa13.11□□□□□ -0.31
LINC00598-213ENST00000637438 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
LINC00598-213ENST00000637438 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
LINC00598-213ENST00000637438 ADAMTSL3P82987 1691 aa13.09□□□□□ -0.31
LINC00598-213ENST00000637438 UGGT1Q9NYU2 1555 aa13.09□□□□□ -0.31
LINC00598-213ENST00000637438 ZMYM3Q14202 1370 aa13.08□□□□□ -0.32
LINC00598-213ENST00000637438 C3P01024 1663 aa13.08□□□□□ -0.32
LINC00598-213ENST00000637438 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
LINC00598-213ENST00000637438 ADGRB3O60242 1522 aa13.07□□□□□ -0.32
LINC00598-213ENST00000637438 SPATA31E1Q6ZUB1 1445 aa13.06□□□□□ -0.32
LINC00598-213ENST00000637438 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
LINC00598-213ENST00000637438 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
LINC00598-213ENST00000637438 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
LINC00598-213ENST00000637438 IFT172Q9UG01 1749 aa13.03□□□□□ -0.32
LINC00598-213ENST00000637438 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
LINC00598-213ENST00000637438 TNRQ92752 1358 aa13.03□□□□□ -0.32
LINC00598-213ENST00000637438 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
LINC00598-213ENST00000637438 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms