RNA–Protein interactions for RNA: ENST00000637438.1

LINC00598-213, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,456 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-213ENST00000637438 NISCHQ9Y2I1 1504 aa21.15■□□□□ 0.98
LINC00598-213ENST00000637438 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
LINC00598-213ENST00000637438 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
LINC00598-213ENST00000637438 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
LINC00598-213ENST00000637438 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
LINC00598-213ENST00000637438 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
LINC00598-213ENST00000637438 ZCCHC6Q5VYS8 1495 aaKnown RBP17.74■□□□□ 0.43
LINC00598-213ENST00000637438 ABCC9O60706 1549 aa17.71■□□□□ 0.43
LINC00598-213ENST00000637438 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
LINC00598-213ENST00000637438 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
LINC00598-213ENST00000637438 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
LINC00598-213ENST00000637438 NACADO15069 1562 aa17.4■□□□□ 0.38
LINC00598-213ENST00000637438 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
LINC00598-213ENST00000637438 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
LINC00598-213ENST00000637438 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
LINC00598-213ENST00000637438 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
LINC00598-213ENST00000637438 FOXD1Q16676 465 aa16.76■□□□□ 0.27
LINC00598-213ENST00000637438 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
LINC00598-213ENST00000637438 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00598-213ENST00000637438 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
LINC00598-213ENST00000637438 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
LINC00598-213ENST00000637438 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
LINC00598-213ENST00000637438 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
LINC00598-213ENST00000637438 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.2
LINC00598-213ENST00000637438 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
LINC00598-213ENST00000637438 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
LINC00598-213ENST00000637438 WIZO95785 1651 aa16.17■□□□□ 0.18
LINC00598-213ENST00000637438 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
LINC00598-213ENST00000637438 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
LINC00598-213ENST00000637438 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
LINC00598-213ENST00000637438 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
LINC00598-213ENST00000637438 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
LINC00598-213ENST00000637438 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
LINC00598-213ENST00000637438 HMGXB3Q12766 1538 aa16.02■□□□□ 0.16
LINC00598-213ENST00000637438 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.16
LINC00598-213ENST00000637438 NCAPD3P42695 1498 aa16■□□□□ 0.15
LINC00598-213ENST00000637438 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
LINC00598-213ENST00000637438 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
LINC00598-213ENST00000637438 MSH5O43196 834 aa15.74■□□□□ 0.11
LINC00598-213ENST00000637438 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
LINC00598-213ENST00000637438 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
LINC00598-213ENST00000637438 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
LINC00598-213ENST00000637438 ADRA2BP18089 450 aa15.63■□□□□ 0.09
LINC00598-213ENST00000637438 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
LINC00598-213ENST00000637438 CFTRP13569 1480 aa15.58■□□□□ 0.08
LINC00598-213ENST00000637438 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
LINC00598-213ENST00000637438 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
LINC00598-213ENST00000637438 NESP48681 1621 aa15.45■□□□□ 0.06
LINC00598-213ENST00000637438 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
LINC00598-213ENST00000637438 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
LINC00598-213ENST00000637438 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
LINC00598-213ENST00000637438 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
LINC00598-213ENST00000637438 CEP164Q9UPV0 1460 aa15.36■□□□□ 0.05
LINC00598-213ENST00000637438 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
LINC00598-213ENST00000637438 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
LINC00598-213ENST00000637438 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
LINC00598-213ENST00000637438 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
LINC00598-213ENST00000637438 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
LINC00598-213ENST00000637438 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
LINC00598-213ENST00000637438 CUX1P39880 1505 aa15.27■□□□□ 0.04
LINC00598-213ENST00000637438 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
LINC00598-213ENST00000637438 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
LINC00598-213ENST00000637438 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
LINC00598-213ENST00000637438 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
LINC00598-213ENST00000637438 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
LINC00598-213ENST00000637438 WDR62O43379 1518 aa15.16■□□□□ 0.02
LINC00598-213ENST00000637438 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
LINC00598-213ENST00000637438 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
LINC00598-213ENST00000637438 EEA1Q15075 1411 aa15.08■□□□□ 0
LINC00598-213ENST00000637438 WDR97A6NE52 1622 aa15.05■□□□□ -0
LINC00598-213ENST00000637438 SOGA1O94964 1423 aa15.04■□□□□ -0
LINC00598-213ENST00000637438 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
LINC00598-213ENST00000637438 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
LINC00598-213ENST00000637438 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
LINC00598-213ENST00000637438 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
LINC00598-213ENST00000637438 CUX2O14529 1486 aa15□□□□□ -0.01
LINC00598-213ENST00000637438 IFT140Q96RY7 1462 aa15□□□□□ -0.01
LINC00598-213ENST00000637438 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
LINC00598-213ENST00000637438 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
LINC00598-213ENST00000637438 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
LINC00598-213ENST00000637438 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
LINC00598-213ENST00000637438 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
LINC00598-213ENST00000637438 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
LINC00598-213ENST00000637438 KIF21BO75037 1637 aa14.89□□□□□ -0.03
LINC00598-213ENST00000637438 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
LINC00598-213ENST00000637438 CUL7Q14999 1698 aa14.88□□□□□ -0.03
LINC00598-213ENST00000637438 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
LINC00598-213ENST00000637438 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
LINC00598-213ENST00000637438 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
LINC00598-213ENST00000637438 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
LINC00598-213ENST00000637438 GOLGA3Q08378 1498 aa14.83□□□□□ -0.04
LINC00598-213ENST00000637438 IGF1RP08069 1367 aa14.83□□□□□ -0.04
LINC00598-213ENST00000637438 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC00598-213ENST00000637438 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
LINC00598-213ENST00000637438 CARMIL1Q5VZK9 1371 aa14.79□□□□□ -0.04
LINC00598-213ENST00000637438 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
LINC00598-213ENST00000637438 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
LINC00598-213ENST00000637438 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
LINC00598-213ENST00000637438 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
LINC00598-213ENST00000637438 LOC105371045A0A1W2PR82 267 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms