RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 BCORL1Q5H9F3 1711 aa22.46■■□□□ 1.19
CLN6-219ENST00000637329 FAM135AQ9P2D6 1515 aa22.44■■□□□ 1.18
CLN6-219ENST00000637329 DIP2CQ9Y2E4 1556 aa22.43■■□□□ 1.18
CLN6-219ENST00000637329 DHX29Q7Z478 1369 aaKnown RBP22.43■■□□□ 1.18
CLN6-219ENST00000637329 MPHOSPH9Q99550 1183 aa22.43■■□□□ 1.18
CLN6-219ENST00000637329 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
CLN6-219ENST00000637329 A2MP01023 1474 aa22.42■■□□□ 1.18
CLN6-219ENST00000637329 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
CLN6-219ENST00000637329 NUP155O75694 1391 aa22.41■■□□□ 1.18
CLN6-219ENST00000637329 LMTK3Q96Q04 1460 aa22.4■■□□□ 1.18
CLN6-219ENST00000637329 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CLN6-219ENST00000637329 VWDEQ8N2E2 1590 aa22.38■■□□□ 1.17
CLN6-219ENST00000637329 REREQ9P2R6 1566 aa22.38■■□□□ 1.17
CLN6-219ENST00000637329 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
CLN6-219ENST00000637329 MROH1Q8NDA8 1641 aa22.36■■□□□ 1.17
CLN6-219ENST00000637329 RAPGEF3O95398 923 aa22.34■■□□□ 1.17
CLN6-219ENST00000637329 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
CLN6-219ENST00000637329 ANKRD30BQ9BXX2 1392 aa22.34■■□□□ 1.17
CLN6-219ENST00000637329 ARHGEF40Q8TER5 1519 aa22.33■■□□□ 1.17
CLN6-219ENST00000637329 TET3O43151 1660 aa22.32■■□□□ 1.16
CLN6-219ENST00000637329 RPRD2Q5VT52 1461 aaKnown RBP22.3■■□□□ 1.16
CLN6-219ENST00000637329 KANK1Q14678 1352 aa22.3■■□□□ 1.16
CLN6-219ENST00000637329 LMTK2Q8IWU2 1503 aa22.3■■□□□ 1.16
CLN6-219ENST00000637329 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
CLN6-219ENST00000637329 PKD2Q13563 968 aa22.27■■□□□ 1.16
CLN6-219ENST00000637329 ATP10AO60312 1499 aa22.26■■□□□ 1.15
CLN6-219ENST00000637329 ZC3H13Q5T200 1668 aaKnown RBP22.26■■□□□ 1.15
CLN6-219ENST00000637329 AGLP35573 1532 aa22.26■■□□□ 1.15
CLN6-219ENST00000637329 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
CLN6-219ENST00000637329 SIN3AQ96ST3 1273 aa22.24■■□□□ 1.15
CLN6-219ENST00000637329 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
CLN6-219ENST00000637329 E9PCH4 1651 aa22.23■■□□□ 1.15
CLN6-219ENST00000637329 KIF3BO15066 747 aa22.22■■□□□ 1.15
CLN6-219ENST00000637329 SOCS7O14512 581 aa22.21■■□□□ 1.15
CLN6-219ENST00000637329 PTPRMP28827 1452 aa22.21■■□□□ 1.15
CLN6-219ENST00000637329 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
CLN6-219ENST00000637329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.14
CLN6-219ENST00000637329 FOXD1Q16676 465 aa22.19■■□□□ 1.14
CLN6-219ENST00000637329 TRPM2O94759 1503 aa22.19■■□□□ 1.14
CLN6-219ENST00000637329 CEP152O94986 1710 aa22.18■■□□□ 1.14
CLN6-219ENST00000637329 SPHKAPQ2M3C7 1700 aa22.18■■□□□ 1.14
CLN6-219ENST00000637329 ABCC3O15438 1527 aa22.17■■□□□ 1.14
CLN6-219ENST00000637329 DISP3Q9P2K9 1392 aa22.15■■□□□ 1.14
CLN6-219ENST00000637329 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
CLN6-219ENST00000637329 CAMSAP1Q5T5Y3 1602 aa22.14■■□□□ 1.14
CLN6-219ENST00000637329 ARID4BQ4LE39 1312 aaPredicted RBP22.14■■□□□ 1.14
CLN6-219ENST00000637329 PLA2R1Q13018 1463 aa22.14■■□□□ 1.13
CLN6-219ENST00000637329 PTPRTO14522 1441 aa22.14■■□□□ 1.13
CLN6-219ENST00000637329 CERKQ8TCT0 537 aa22.12■■□□□ 1.13
CLN6-219ENST00000637329 NEURL4Q96JN8 1562 aa22.09■■□□□ 1.13
CLN6-219ENST00000637329 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
CLN6-219ENST00000637329 ADAMTSL3P82987 1691 aa22.08■■□□□ 1.13
CLN6-219ENST00000637329 ARHGAP31Q2M1Z3 1444 aa22.08■■□□□ 1.13
CLN6-219ENST00000637329 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
CLN6-219ENST00000637329 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
CLN6-219ENST00000637329 ILDR2Q71H61 639 aa22.05■■□□□ 1.12
CLN6-219ENST00000637329 NPATQ14207 1427 aa22.05■■□□□ 1.12
CLN6-219ENST00000637329 GGT6Q6P531 493 aa22.04■■□□□ 1.12
CLN6-219ENST00000637329 CLTCL1P53675 1640 aa22.04■■□□□ 1.12
CLN6-219ENST00000637329 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
CLN6-219ENST00000637329 WASHC2CQ9Y4E1 1318 aa22.03■■□□□ 1.12
CLN6-219ENST00000637329 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
CLN6-219ENST00000637329 HSPA2P54652 639 aa21.99■■□□□ 1.11
CLN6-219ENST00000637329 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
CLN6-219ENST00000637329 NOS1P29475 1434 aa21.97■■□□□ 1.11
CLN6-219ENST00000637329 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
CLN6-219ENST00000637329 PIK3C2BO00750 1634 aa21.97■■□□□ 1.11
CLN6-219ENST00000637329 CLTCQ00610 1675 aaKnown RBP21.96■■□□□ 1.11
CLN6-219ENST00000637329 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
CLN6-219ENST00000637329 PREX1Q8TCU6 1659 aa21.95■■□□□ 1.1
CLN6-219ENST00000637329 MADDQ8WXG6 1647 aa21.95■■□□□ 1.1
CLN6-219ENST00000637329 ADGRB3O60242 1522 aa21.94■■□□□ 1.1
CLN6-219ENST00000637329 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
CLN6-219ENST00000637329 KIF1BO60333 1816 aa21.94■■□□□ 1.1
CLN6-219ENST00000637329 SYNMO15061 1565 aa21.93■■□□□ 1.1
CLN6-219ENST00000637329 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
CLN6-219ENST00000637329 UGGT1Q9NYU2 1555 aa21.91■■□□□ 1.1
CLN6-219ENST00000637329 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
CLN6-219ENST00000637329 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
CLN6-219ENST00000637329 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
CLN6-219ENST00000637329 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
CLN6-219ENST00000637329 STAC3Q96MF2 364 aa21.87■■□□□ 1.09
CLN6-219ENST00000637329 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
CLN6-219ENST00000637329 RIMS1Q86UR5 1692 aaKnown RBP21.86■■□□□ 1.09
CLN6-219ENST00000637329 PRAG1Q86YV5 1406 aa21.86■■□□□ 1.09
CLN6-219ENST00000637329 MYOM2P54296 1465 aa21.85■■□□□ 1.09
CLN6-219ENST00000637329 TRPM1Q7Z4N2 1603 aa21.84■■□□□ 1.09
CLN6-219ENST00000637329 LAMC1P11047 1609 aa21.83■■□□□ 1.08
CLN6-219ENST00000637329 NBPF8Q3BBV2 869 aa21.81■■□□□ 1.08
CLN6-219ENST00000637329 DCAF11Q8TEB1 546 aa21.81■■□□□ 1.08
CLN6-219ENST00000637329 FER1L4A9Z1Z3 1794 aa21.81■■□□□ 1.08
CLN6-219ENST00000637329 ESF1Q9H501 851 aaKnown RBP21.8■■□□□ 1.08
CLN6-219ENST00000637329 SLC52A1Q9NWF4 448 aa21.8■■□□□ 1.08
CLN6-219ENST00000637329 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
CLN6-219ENST00000637329 PPLO60437 1756 aa21.77■■□□□ 1.08
CLN6-219ENST00000637329 MLECQ14165 292 aa21.76■■□□□ 1.07
CLN6-219ENST00000637329 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
CLN6-219ENST00000637329 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
CLN6-219ENST00000637329 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
CLN6-219ENST00000637329 ZMYM3Q14202 1370 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms