RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DUOX2Q9NRD8 1548 aa16.13■□□□□ 0.17
CLN6-217ENST00000636964 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
CLN6-217ENST00000636964 EIF4G2P78344 907 aaKnown RBP eCLIP16.12■□□□□ 0.172e-6■■□□□ 13.4
CLN6-217ENST00000636964 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
CLN6-217ENST00000636964 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
CLN6-217ENST00000636964 RGL3Q3MIN7 710 aa16.09■□□□□ 0.17
CLN6-217ENST00000636964 ERBINQ96RT1 1412 aa16.08■□□□□ 0.17
CLN6-217ENST00000636964 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
CLN6-217ENST00000636964 DCAF11Q8TEB1 546 aa16.08■□□□□ 0.16
CLN6-217ENST00000636964 RTEL1-TNFRSF6BF6WH68 1400 aa16.07■□□□□ 0.16
CLN6-217ENST00000636964 UNC13BO14795 1591 aa16.07■□□□□ 0.16
CLN6-217ENST00000636964 KIF3BO15066 747 aa16.07■□□□□ 0.16
CLN6-217ENST00000636964 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
CLN6-217ENST00000636964 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
CLN6-217ENST00000636964 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
CLN6-217ENST00000636964 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
CLN6-217ENST00000636964 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
CLN6-217ENST00000636964 WASHC2AQ641Q2 1341 aa16.04■□□□□ 0.16
CLN6-217ENST00000636964 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
CLN6-217ENST00000636964 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
CLN6-217ENST00000636964 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
CLN6-217ENST00000636964 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
CLN6-217ENST00000636964 RAPGEF3O95398 923 aa16.03■□□□□ 0.16
CLN6-217ENST00000636964 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
CLN6-217ENST00000636964 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
CLN6-217ENST00000636964 MAGI2Q86UL8 1455 aa16■□□□□ 0.15
CLN6-217ENST00000636964 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
CLN6-217ENST00000636964 ZNF518AQ6AHZ1 1483 aa15.99■□□□□ 0.15
CLN6-217ENST00000636964 ANP32CO43423 234 aa15.98■□□□□ 0.15
CLN6-217ENST00000636964 FAM69CQ0P6D2 419 aa15.97■□□□□ 0.15
CLN6-217ENST00000636964 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
CLN6-217ENST00000636964 KIDINS220Q9ULH0 1771 aa15.97■□□□□ 0.15
CLN6-217ENST00000636964 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
CLN6-217ENST00000636964 POGZQ7Z3K3 1410 aa15.96■□□□□ 0.15
CLN6-217ENST00000636964 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
CLN6-217ENST00000636964 USP47Q96K76 1375 aa15.95■□□□□ 0.14
CLN6-217ENST00000636964 GGT6Q6P531 493 aa15.95■□□□□ 0.14
CLN6-217ENST00000636964 KANK1Q14678 1352 aa15.95■□□□□ 0.14
CLN6-217ENST00000636964 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
CLN6-217ENST00000636964 CCDC7Q96M83 1385 aa15.93■□□□□ 0.14
CLN6-217ENST00000636964 E9PCH4 1651 aa15.93■□□□□ 0.14
CLN6-217ENST00000636964 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
CLN6-217ENST00000636964 BCANQ96GW7 911 aa15.93■□□□□ 0.14
CLN6-217ENST00000636964 CFAP74Q9C0B2 1584 aa15.92■□□□□ 0.14
CLN6-217ENST00000636964 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
CLN6-217ENST00000636964 A2MP01023 1474 aa15.92■□□□□ 0.14
CLN6-217ENST00000636964 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
CLN6-217ENST00000636964 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
CLN6-217ENST00000636964 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
CLN6-217ENST00000636964 NEO1Q92859 1461 aa15.9■□□□□ 0.14
CLN6-217ENST00000636964 ATP10AO60312 1499 aa15.9■□□□□ 0.14
CLN6-217ENST00000636964 ST20-MTHFSA0A0A6YYL1 179 aa15.89■□□□□ 0.13
CLN6-217ENST00000636964 KDM5CP41229 1560 aa15.89■□□□□ 0.13
CLN6-217ENST00000636964 MLH3Q9UHC1 1453 aa15.89■□□□□ 0.13
CLN6-217ENST00000636964 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
CLN6-217ENST00000636964 PRAG1Q86YV5 1406 aa15.88■□□□□ 0.13
CLN6-217ENST00000636964 MROH1Q8NDA8 1641 aa15.87■□□□□ 0.13
CLN6-217ENST00000636964 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
CLN6-217ENST00000636964 MAP3K4Q9Y6R4 1608 aa15.87■□□□□ 0.13
CLN6-217ENST00000636964 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
CLN6-217ENST00000636964 VWDEQ8N2E2 1590 aa15.86■□□□□ 0.13
CLN6-217ENST00000636964 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
CLN6-217ENST00000636964 TET3O43151 1660 aa15.86■□□□□ 0.13
CLN6-217ENST00000636964 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
CLN6-217ENST00000636964 MSH5O43196 834 aa15.86■□□□□ 0.13
CLN6-217ENST00000636964 PRDM15P57071 1507 aaPredicted RBP15.85■□□□□ 0.13
CLN6-217ENST00000636964 BCORL1Q5H9F3 1711 aa15.85■□□□□ 0.13
CLN6-217ENST00000636964 FRMPD1Q5SYB0 1578 aa15.85■□□□□ 0.13
CLN6-217ENST00000636964 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
CLN6-217ENST00000636964 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
CLN6-217ENST00000636964 PTPRTO14522 1441 aa15.84■□□□□ 0.13
CLN6-217ENST00000636964 WASHC2CQ9Y4E1 1318 aa15.84■□□□□ 0.13
CLN6-217ENST00000636964 YEATS2Q9ULM3 1422 aa15.84■□□□□ 0.13
CLN6-217ENST00000636964 SPHKAPQ2M3C7 1700 aa15.84■□□□□ 0.13
CLN6-217ENST00000636964 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.13
CLN6-217ENST00000636964 CFAP65Q6ZU64 1925 aaKnown RBP15.83■□□□□ 0.13
CLN6-217ENST00000636964 CCER2I3L3R5 266 aa15.83■□□□□ 0.13
CLN6-217ENST00000636964 TRPM2O94759 1503 aa15.83■□□□□ 0.12
CLN6-217ENST00000636964 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
CLN6-217ENST00000636964 PKNOX2Q96KN3 472 aa15.83■□□□□ 0.12
CLN6-217ENST00000636964 DIP2BQ9P265 1576 aa15.82■□□□□ 0.12
CLN6-217ENST00000636964 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
CLN6-217ENST00000636964 GLI2P10070 1586 aa15.82■□□□□ 0.12
CLN6-217ENST00000636964 CEP152O94986 1710 aa15.82■□□□□ 0.12
CLN6-217ENST00000636964 TRPM1Q7Z4N2 1603 aa15.81■□□□□ 0.12
CLN6-217ENST00000636964 FKBP8Q14318 412 aa15.81■□□□□ 0.12
CLN6-217ENST00000636964 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
CLN6-217ENST00000636964 PPRC1Q5VV67 1664 aaKnown RBP15.8■□□□□ 0.12
CLN6-217ENST00000636964 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
CLN6-217ENST00000636964 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
CLN6-217ENST00000636964 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
CLN6-217ENST00000636964 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.12
CLN6-217ENST00000636964 RNF17Q9BXT8 1623 aaKnown RBP15.77■□□□□ 0.12
CLN6-217ENST00000636964 NPATQ14207 1427 aa15.77■□□□□ 0.11
CLN6-217ENST00000636964 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
CLN6-217ENST00000636964 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
CLN6-217ENST00000636964 LMTK2Q8IWU2 1503 aa15.74■□□□□ 0.11
CLN6-217ENST00000636964 ADGRF5Q8IZF2 1346 aa15.73■□□□□ 0.11
CLN6-217ENST00000636964 ABCC3O15438 1527 aa15.73■□□□□ 0.11
CLN6-217ENST00000636964 CFAP70Q5T0N1 1121 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms