RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 MADDQ8WXG6 1647 aa23.29■■□□□ 1.32
CTSD-207ENST00000636571 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
CTSD-207ENST00000636571 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
CTSD-207ENST00000636571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
CTSD-207ENST00000636571 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
CTSD-207ENST00000636571 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.31
CTSD-207ENST00000636571 SETD5Q9C0A6 1442 aa23.26■■□□□ 1.31
CTSD-207ENST00000636571 PRDM15P57071 1507 aaPredicted RBP23.24■■□□□ 1.31
CTSD-207ENST00000636571 UNC13BO14795 1591 aa23.24■■□□□ 1.31
CTSD-207ENST00000636571 CEP152O94986 1710 aa23.23■■□□□ 1.31
CTSD-207ENST00000636571 RAB3GAP2Q9H2M9 1393 aa23.23■■□□□ 1.31
CTSD-207ENST00000636571 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
CTSD-207ENST00000636571 RIMS1Q86UR5 1692 aaKnown RBP23.23■■□□□ 1.31
CTSD-207ENST00000636571 ABCC3O15438 1527 aa23.18■■□□□ 1.3
CTSD-207ENST00000636571 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
CTSD-207ENST00000636571 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
CTSD-207ENST00000636571 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
CTSD-207ENST00000636571 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
CTSD-207ENST00000636571 NUP155O75694 1391 aa23.17■■□□□ 1.3
CTSD-207ENST00000636571 TRIM52Q96A61 297 aa23.16■■□□□ 1.3
CTSD-207ENST00000636571 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.3
CTSD-207ENST00000636571 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.3
CTSD-207ENST00000636571 IQGAP3Q86VI3 1631 aa23.14■■□□□ 1.29
CTSD-207ENST00000636571 ZC3H13Q5T200 1668 aaKnown RBP23.13■■□□□ 1.29
CTSD-207ENST00000636571 KANK1Q14678 1352 aa23.13■■□□□ 1.29
CTSD-207ENST00000636571 CAMSAP1Q5T5Y3 1602 aa23.12■■□□□ 1.29
CTSD-207ENST00000636571 C3P01024 1663 aa23.12■■□□□ 1.29
CTSD-207ENST00000636571 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
CTSD-207ENST00000636571 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
CTSD-207ENST00000636571 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
CTSD-207ENST00000636571 PTPRMP28827 1452 aa23.11■■□□□ 1.29
CTSD-207ENST00000636571 MROH2AA6NES4 1674 aa23.11■■□□□ 1.29
CTSD-207ENST00000636571 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
CTSD-207ENST00000636571 PZPP20742 1482 aa23.1■■□□□ 1.29
CTSD-207ENST00000636571 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
CTSD-207ENST00000636571 LMTK2Q8IWU2 1503 aa23.09■■□□□ 1.29
CTSD-207ENST00000636571 TET3O43151 1660 aa23.07■■□□□ 1.28
CTSD-207ENST00000636571 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
CTSD-207ENST00000636571 E9PCH4 1651 aa23.05■■□□□ 1.28
CTSD-207ENST00000636571 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
CTSD-207ENST00000636571 NPATQ14207 1427 aa23.05■■□□□ 1.28
CTSD-207ENST00000636571 SLC4A1APQ9BWU0 796 aaKnown RBP23.02■■□□□ 1.28
CTSD-207ENST00000636571 HRCP23327 699 aa23.01■■□□□ 1.27
CTSD-207ENST00000636571 FOXD1Q16676 465 aa23.01■■□□□ 1.27
CTSD-207ENST00000636571 MPHOSPH9Q99550 1183 aa23.01■■□□□ 1.27
CTSD-207ENST00000636571 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
CTSD-207ENST00000636571 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
CTSD-207ENST00000636571 PKD2Q13563 968 aa22.99■■□□□ 1.27
CTSD-207ENST00000636571 ERVK-7P63135 1459 aa22.96■■□□□ 1.27
CTSD-207ENST00000636571 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
CTSD-207ENST00000636571 RPRD2Q5VT52 1461 aaKnown RBP22.93■■□□□ 1.26
CTSD-207ENST00000636571 SYNMO15061 1565 aa22.93■■□□□ 1.26
CTSD-207ENST00000636571 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
CTSD-207ENST00000636571 NOS1P29475 1434 aa22.91■■□□□ 1.26
CTSD-207ENST00000636571 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
CTSD-207ENST00000636571 TNRQ92752 1358 aa22.9■■□□□ 1.26
CTSD-207ENST00000636571 PLA2R1Q13018 1463 aa22.89■■□□□ 1.26
CTSD-207ENST00000636571 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.26
CTSD-207ENST00000636571 MYO3AQ8NEV4 1616 aa22.88■■□□□ 1.25
CTSD-207ENST00000636571 SETD1BQ9UPS6 1966 aaKnown RBP22.88■■□□□ 1.25
CTSD-207ENST00000636571 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
CTSD-207ENST00000636571 PTPRTO14522 1441 aa22.85■■□□□ 1.25
CTSD-207ENST00000636571 TRPM2O94759 1503 aa22.83■■□□□ 1.24
CTSD-207ENST00000636571 IDI1Q13907 227 aa22.82■■□□□ 1.24
CTSD-207ENST00000636571 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
CTSD-207ENST00000636571 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
CTSD-207ENST00000636571 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
CTSD-207ENST00000636571 UHRF1BP1Q6BDS2 1440 aa22.79■■□□□ 1.24
CTSD-207ENST00000636571 CEP170BQ9Y4F5 1589 aaPredicted RBP22.79■■□□□ 1.24
CTSD-207ENST00000636571 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
CTSD-207ENST00000636571 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
CTSD-207ENST00000636571 LMTK3Q96Q04 1460 aa22.78■■□□□ 1.24
CTSD-207ENST00000636571 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
CTSD-207ENST00000636571 NLRP1Q9C000 1473 aa22.77■■□□□ 1.24
CTSD-207ENST00000636571 A2ML1A8K2U0 1454 aa22.76■■□□□ 1.23
CTSD-207ENST00000636571 UBR1Q8IWV7 1749 aa22.75■■□□□ 1.23
CTSD-207ENST00000636571 HSPA2P54652 639 aa22.74■■□□□ 1.23
CTSD-207ENST00000636571 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
CTSD-207ENST00000636571 SLC52A1Q9NWF4 448 aa22.74■■□□□ 1.23
CTSD-207ENST00000636571 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
CTSD-207ENST00000636571 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
CTSD-207ENST00000636571 TMEM131LA2VDJ0 1609 aa22.72■■□□□ 1.23
CTSD-207ENST00000636571 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
CTSD-207ENST00000636571 KIF1BO60333 1816 aa22.71■■□□□ 1.23
CTSD-207ENST00000636571 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
CTSD-207ENST00000636571 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
CTSD-207ENST00000636571 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
CTSD-207ENST00000636571 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
CTSD-207ENST00000636571 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
CTSD-207ENST00000636571 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
CTSD-207ENST00000636571 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
CTSD-207ENST00000636571 THEMISQ8N1K5 641 aaPredicted RBP22.61■■□□□ 1.21
CTSD-207ENST00000636571 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
CTSD-207ENST00000636571 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
CTSD-207ENST00000636571 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
CTSD-207ENST00000636571 SLIT1O75093 1534 aa22.58■■□□□ 1.21
CTSD-207ENST00000636571 STRCQ7RTU9 1775 aa22.58■■□□□ 1.21
CTSD-207ENST00000636571 LTKP29376 864 aa22.58■■□□□ 1.2
CTSD-207ENST00000636571 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
CTSD-207ENST00000636571 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms