RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 RTN4Q9NQC3 1192 aaKnown RBP26.23■■□□□ 1.79
SMARCA2-227ENST00000634760 CGNL1Q0VF96 1302 aa26.22■■□□□ 1.79
SMARCA2-227ENST00000634760 EVC2Q86UK5 1308 aa26.22■■□□□ 1.79
SMARCA2-227ENST00000634760 E9PSI1 815 aa26.22■■□□□ 1.79
SMARCA2-227ENST00000634760 MYOM3Q5VTT5 1437 aa26.22■■□□□ 1.79
SMARCA2-227ENST00000634760 PTPRGP23470 1445 aa26.21■■□□□ 1.79
SMARCA2-227ENST00000634760 VGFO15240 615 aaPredicted RBP26.21■■□□□ 1.79
SMARCA2-227ENST00000634760 NGDNQ8NEJ9 315 aaKnown RBP26.21■■□□□ 1.79
SMARCA2-227ENST00000634760 GORABQ5T7V8 394 aa26.21■■□□□ 1.79
SMARCA2-227ENST00000634760 CCDC146Q8IYE0 955 aa26.2■■□□□ 1.79
SMARCA2-227ENST00000634760 CHMP4CQ96CF2 233 aa26.2■■□□□ 1.79
SMARCA2-227ENST00000634760 STAC3Q96MF2 364 aa26.2■■□□□ 1.79
SMARCA2-227ENST00000634760 GOLGA6L3A6NEY3 463 aa26.2■■□□□ 1.79
SMARCA2-227ENST00000634760 AMPHP49418 695 aa26.2■■□□□ 1.78
SMARCA2-227ENST00000634760 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 ST18O60284 1047 aa26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 TMX4Q9H1E5 349 aaPredicted RBP26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 USP47Q96K76 1375 aa26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 PHF14O94880 888 aa26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 TRIM6-TRIM34B2RNG4 842 aa26.19■■□□□ 1.78
SMARCA2-227ENST00000634760 PANK3Q9H999 370 aa26.18■■□□□ 1.78
SMARCA2-227ENST00000634760 KIF3AQ9Y496 699 aa26.17■■□□□ 1.78
SMARCA2-227ENST00000634760 TAF7LQ5H9L4 462 aa26.17■■□□□ 1.78
SMARCA2-227ENST00000634760 ST20-MTHFSA0A0A6YYL1 179 aa26.15■■□□□ 1.78
SMARCA2-227ENST00000634760 HSP90B1P14625 803 aaKnown RBP26.15■■□□□ 1.78
SMARCA2-227ENST00000634760 SLKQ9H2G2 1235 aaPredicted RBP26.14■■□□□ 1.78
SMARCA2-227ENST00000634760 TSHZ2Q9NRE2 1034 aa26.14■■□□□ 1.78
SMARCA2-227ENST00000634760 GAPVD1Q14C86 1478 aa26.14■■□□□ 1.78
SMARCA2-227ENST00000634760 DDX11L8A8MPP1 907 aa26.14■■□□□ 1.77
SMARCA2-227ENST00000634760 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
SMARCA2-227ENST00000634760 USP35Q9P2H5 1018 aa26.12■■□□□ 1.77
SMARCA2-227ENST00000634760 ISY1Q9ULR0 285 aaKnown RBP26.12■■□□□ 1.77
SMARCA2-227ENST00000634760 PRKRIP1Q9H875 184 aaPredicted RBP26.12■■□□□ 1.77
SMARCA2-227ENST00000634760 TRAK1Q9UPV9 953 aa26.11■■□□□ 1.77
SMARCA2-227ENST00000634760 COG3Q96JB2 828 aa26.11■■□□□ 1.77
SMARCA2-227ENST00000634760 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
SMARCA2-227ENST00000634760 ZKSCAN2Q63HK3 967 aa26.1■■□□□ 1.77
SMARCA2-227ENST00000634760 SLC4A10Q6U841 1118 aa26.1■■□□□ 1.77
SMARCA2-227ENST00000634760 FAM161AQ3B820 660 aa26.09■■□□□ 1.77
SMARCA2-227ENST00000634760 RRP1P56182 461 aaKnown RBP26.09■■□□□ 1.77
SMARCA2-227ENST00000634760 CHMP3Q9Y3E7 222 aa26.08■■□□□ 1.77
SMARCA2-227ENST00000634760 KIF16BQ96L93 1317 aa26.08■■□□□ 1.77
SMARCA2-227ENST00000634760 MIA2Q96PC5 1412 aa26.08■■□□□ 1.76
SMARCA2-227ENST00000634760 FGD6Q6ZV73 1430 aa26.07■■□□□ 1.76
SMARCA2-227ENST00000634760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMARCA2-227ENST00000634760 ZNF330Q9Y3S2 320 aaPredicted RBP26.06■■□□□ 1.76
SMARCA2-227ENST00000634760 ROCK1Q13464 1354 aa26.05■■□□□ 1.76
SMARCA2-227ENST00000634760 FYCO1Q9BQS8 1478 aa26.05■■□□□ 1.76
SMARCA2-227ENST00000634760 CLUAP1Q96AJ1 413 aa26.05■■□□□ 1.76
SMARCA2-227ENST00000634760 CLSTN1O94985 981 aa26.05■■□□□ 1.76
SMARCA2-227ENST00000634760 SKOR2Q2VWA4 1001 aaPredicted RBP26.04■■□□□ 1.76
SMARCA2-227ENST00000634760 KIF21BO75037 1637 aa26.03■■□□□ 1.76
SMARCA2-227ENST00000634760 GZF1Q9H116 711 aaPredicted RBP26.02■■□□□ 1.76
SMARCA2-227ENST00000634760 IGF1RP08069 1367 aa26.02■■□□□ 1.76
SMARCA2-227ENST00000634760 AAMPQ13685 434 aa26.01■■□□□ 1.76
SMARCA2-227ENST00000634760 NUTM2DQ5VT03 806 aaPredicted RBP26.01■■□□□ 1.75
SMARCA2-227ENST00000634760 ATP6V1DQ9Y5K8 247 aa26■■□□□ 1.75
SMARCA2-227ENST00000634760 C1orf141Q5JVX7 400 aa26■■□□□ 1.75
SMARCA2-227ENST00000634760 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
SMARCA2-227ENST00000634760 LRRFIP1Q32MZ4 808 aaKnown RBP25.99■■□□□ 1.75
SMARCA2-227ENST00000634760 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
SMARCA2-227ENST00000634760 CASKIN1Q8WXD9 1431 aa25.99■■□□□ 1.75
SMARCA2-227ENST00000634760 LRRC9Q6ZRR7 1453 aa25.98■■□□□ 1.75
SMARCA2-227ENST00000634760 DDX19BQ9UMR2 479 aa25.98■■□□□ 1.75
SMARCA2-227ENST00000634760 PDE4AP27815 886 aa25.94■■□□□ 1.74
SMARCA2-227ENST00000634760 API5Q9BZZ5 524 aaKnown RBP25.94■■□□□ 1.74
SMARCA2-227ENST00000634760 CNTLNQ9NXG0 1405 aa25.93■■□□□ 1.74
SMARCA2-227ENST00000634760 DIAPH1O60610 1272 aaKnown RBP25.93■■□□□ 1.74
SMARCA2-227ENST00000634760 RRP7AQ9Y3A4 280 aaKnown RBP25.93■■□□□ 1.74
SMARCA2-227ENST00000634760 RUFY2Q8WXA3 655 aa25.92■■□□□ 1.74
SMARCA2-227ENST00000634760 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
SMARCA2-227ENST00000634760 ANKRD45Q5TZF3 282 aa25.91■■□□□ 1.74
SMARCA2-227ENST00000634760 CRBNQ96SW2 442 aa25.91■■□□□ 1.74
SMARCA2-227ENST00000634760 CCDC7Q96M83 1385 aa25.9■■□□□ 1.74
SMARCA2-227ENST00000634760 CCDC9Q9Y3X0 531 aaKnown RBP25.9■■□□□ 1.74
SMARCA2-227ENST00000634760 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
SMARCA2-227ENST00000634760 RUNDC1Q96C34 613 aa25.9■■□□□ 1.74
SMARCA2-227ENST00000634760 LTV1Q96GA3 475 aaPredicted RBP25.9■■□□□ 1.74
SMARCA2-227ENST00000634760 REC8O95072 547 aa25.89■■□□□ 1.73
SMARCA2-227ENST00000634760 RASSF8Q8NHQ8 419 aa25.88■■□□□ 1.73
SMARCA2-227ENST00000634760 NOC3LQ8WTT2 800 aaKnown RBP25.88■■□□□ 1.73
SMARCA2-227ENST00000634760 NEXNQ0ZGT2 675 aa25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 EFCAB5A4FU69 1503 aa25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 H3BQV1 296 aa25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 IFFO2Q5TF58 517 aa25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 EXOC6Q8TAG9 804 aa25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 SF3A1Q15459 793 aaKnown RBP25.87■■□□□ 1.73
SMARCA2-227ENST00000634760 G3V3G9 751 aa25.86■■□□□ 1.73
SMARCA2-227ENST00000634760 DCAF8Q5TAQ9 597 aa25.86■■□□□ 1.73
SMARCA2-227ENST00000634760 NCOA2Q15596 1464 aa25.86■■□□□ 1.73
SMARCA2-227ENST00000634760 TEFQ10587 303 aa25.86■■□□□ 1.73
SMARCA2-227ENST00000634760 RRBP1Q9P2E9 1410 aaKnown RBP25.85■■□□□ 1.73
SMARCA2-227ENST00000634760 RILPL2Q969X0 211 aa25.85■■□□□ 1.73
SMARCA2-227ENST00000634760 RAD54L2Q9Y4B4 1467 aa25.84■■□□□ 1.73
SMARCA2-227ENST00000634760 GOLGA6L1Q8N7Z2 621 aa25.84■■□□□ 1.73
SMARCA2-227ENST00000634760 DZIP1LQ8IYY4 767 aaKnown RBP25.84■■□□□ 1.73
SMARCA2-227ENST00000634760 FANCIQ9NVI1 1328 aa25.84■■□□□ 1.73
SMARCA2-227ENST00000634760 FAM184AQ8NB25 1140 aa25.83■■□□□ 1.73
SMARCA2-227ENST00000634760 DIAPH3Q9NSV4 1193 aa25.83■■□□□ 1.73
SMARCA2-227ENST00000634760 ANKRD50Q9ULJ7 1429 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms