RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
SPTAN1-215ENST00000628867 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
SPTAN1-215ENST00000628867 NPHP4O75161 1426 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-215ENST00000628867 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
SPTAN1-215ENST00000628867 FAM135AQ9P2D6 1515 aa12.3□□□□□ -0.44
SPTAN1-215ENST00000628867 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
SPTAN1-215ENST00000628867 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
SPTAN1-215ENST00000628867 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
SPTAN1-215ENST00000628867 ZNF644Q9H582 1327 aaPredicted RBP12.29□□□□□ -0.44
SPTAN1-215ENST00000628867 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
SPTAN1-215ENST00000628867 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
SPTAN1-215ENST00000628867 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
SPTAN1-215ENST00000628867 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
SPTAN1-215ENST00000628867 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
SPTAN1-215ENST00000628867 EID1Q9Y6B2 187 aa12.25□□□□□ -0.45
SPTAN1-215ENST00000628867 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
SPTAN1-215ENST00000628867 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
SPTAN1-215ENST00000628867 TXNDC2Q86VQ3 553 aa12.24□□□□□ -0.45
SPTAN1-215ENST00000628867 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
SPTAN1-215ENST00000628867 NLRP1Q9C000 1473 aa12.24□□□□□ -0.45
SPTAN1-215ENST00000628867 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
SPTAN1-215ENST00000628867 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
SPTAN1-215ENST00000628867 PZPP20742 1482 aa12.23□□□□□ -0.45
SPTAN1-215ENST00000628867 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
SPTAN1-215ENST00000628867 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
SPTAN1-215ENST00000628867 MED14O60244 1454 aa12.21□□□□□ -0.45
SPTAN1-215ENST00000628867 VWDEQ8N2E2 1590 aa12.21□□□□□ -0.46
SPTAN1-215ENST00000628867 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
SPTAN1-215ENST00000628867 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.46
SPTAN1-215ENST00000628867 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
SPTAN1-215ENST00000628867 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
SPTAN1-215ENST00000628867 BCANQ96GW7 911 aa12.19□□□□□ -0.46
SPTAN1-215ENST00000628867 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-215ENST00000628867 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
SPTAN1-215ENST00000628867 DEPDC5O75140 1603 aa12.17□□□□□ -0.46
SPTAN1-215ENST00000628867 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
SPTAN1-215ENST00000628867 CCDC141Q6ZP82 1450 aa12.15□□□□□ -0.46
SPTAN1-215ENST00000628867 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-215ENST00000628867 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
SPTAN1-215ENST00000628867 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
SPTAN1-215ENST00000628867 LTKP29376 864 aa12.14□□□□□ -0.47
SPTAN1-215ENST00000628867 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
SPTAN1-215ENST00000628867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.475e-9■■■■□ 23.1
SPTAN1-215ENST00000628867 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-215ENST00000628867 KCNA6P17658 529 aa12.12□□□□□ -0.47
SPTAN1-215ENST00000628867 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-215ENST00000628867 SYNMO15061 1565 aa12.12□□□□□ -0.47
SPTAN1-215ENST00000628867 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
SPTAN1-215ENST00000628867 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
SPTAN1-215ENST00000628867 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 EHBP1L1Q8N3D4 1523 aa12.1□□□□□ -0.47
SPTAN1-215ENST00000628867 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
SPTAN1-215ENST00000628867 MSH6P52701 1360 aa12.08□□□□□ -0.48
SPTAN1-215ENST00000628867 ERVK-7P63135 1459 aa12.08□□□□□ -0.48
SPTAN1-215ENST00000628867 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-215ENST00000628867 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
SPTAN1-215ENST00000628867 KANK1Q14678 1352 aa12.06□□□□□ -0.48
SPTAN1-215ENST00000628867 JCADQ9P266 1359 aa12.06□□□□□ -0.48
SPTAN1-215ENST00000628867 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPTAN1-215ENST00000628867 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
SPTAN1-215ENST00000628867 ABCC3O15438 1527 aa12.06□□□□□ -0.48
SPTAN1-215ENST00000628867 TMEM2Q9UHN6 1383 aa12.05□□□□□ -0.48
SPTAN1-215ENST00000628867 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
SPTAN1-215ENST00000628867 RXRBP28702 533 aa12.05□□□□□ -0.48
SPTAN1-215ENST00000628867 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
SPTAN1-215ENST00000628867 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-215ENST00000628867 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
SPTAN1-215ENST00000628867 IDI1Q13907 227 aa12.03□□□□□ -0.48
SPTAN1-215ENST00000628867 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
SPTAN1-215ENST00000628867 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 ATF3P18847 181 aa12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 FOXD1Q16676 465 aa12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.49
SPTAN1-215ENST00000628867 SLIT1O75093 1534 aa12.01□□□□□ -0.49
SPTAN1-215ENST00000628867 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
SPTAN1-215ENST00000628867 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
SPTAN1-215ENST00000628867 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
SPTAN1-215ENST00000628867 CADPS2Q86UW7 1296 aa11.99□□□□□ -0.49
SPTAN1-215ENST00000628867 ARHGAP31Q2M1Z3 1444 aa11.98□□□□□ -0.49
SPTAN1-215ENST00000628867 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-215ENST00000628867 APLP2Q06481 763 aa11.98□□□□□ -0.49
SPTAN1-215ENST00000628867 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
SPTAN1-215ENST00000628867 DUOX2Q9NRD8 1548 aa11.97□□□□□ -0.49
SPTAN1-215ENST00000628867 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
SPTAN1-215ENST00000628867 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
SPTAN1-215ENST00000628867 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-215ENST00000628867 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-215ENST00000628867 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-215ENST00000628867 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
SPTAN1-215ENST00000628867 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.49
SPTAN1-215ENST00000628867 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
SPTAN1-215ENST00000628867 CEP152O94986 1710 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms