RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 ERBINQ96RT1 1412 aa12.52□□□□□ -0.41
CHD2-211ENST00000627460 ZNF518AQ6AHZ1 1483 aa12.52□□□□□ -0.41
CHD2-211ENST00000627460 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
CHD2-211ENST00000627460 CAPN15O75808 1086 aa12.51□□□□□ -0.41
CHD2-211ENST00000627460 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
CHD2-211ENST00000627460 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
CHD2-211ENST00000627460 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
CHD2-211ENST00000627460 MPHOSPH9Q99550 1183 aa12.49□□□□□ -0.41
CHD2-211ENST00000627460 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
CHD2-211ENST00000627460 ARHGEF12Q9NZN5 1544 aa12.48□□□□□ -0.41
CHD2-211ENST00000627460 TEX14Q8IWB6 1497 aa12.48□□□□□ -0.41
CHD2-211ENST00000627460 KDM6BO15054 1643 aa12.47□□□□□ -0.41
CHD2-211ENST00000627460 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
CHD2-211ENST00000627460 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
CHD2-211ENST00000627460 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
CHD2-211ENST00000627460 PROM2Q8N271 834 aa12.46□□□□□ -0.41
CHD2-211ENST00000627460 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
CHD2-211ENST00000627460 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
CHD2-211ENST00000627460 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
CHD2-211ENST00000627460 NUP155O75694 1391 aa12.44□□□□□ -0.42
CHD2-211ENST00000627460 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
CHD2-211ENST00000627460 UNC13BO14795 1591 aa12.44□□□□□ -0.42
CHD2-211ENST00000627460 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
CHD2-211ENST00000627460 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
CHD2-211ENST00000627460 KDM5CP41229 1560 aa12.43□□□□□ -0.42
CHD2-211ENST00000627460 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
CHD2-211ENST00000627460 PZPP20742 1482 aa12.42□□□□□ -0.42
CHD2-211ENST00000627460 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
CHD2-211ENST00000627460 KANK1Q14678 1352 aa12.42□□□□□ -0.42
CHD2-211ENST00000627460 MAGI2Q86UL8 1455 aa12.41□□□□□ -0.42
CHD2-211ENST00000627460 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
CHD2-211ENST00000627460 AFAP1Q8N556 730 aa12.41□□□□□ -0.42
CHD2-211ENST00000627460 HECW2Q9P2P5 1572 aa12.41□□□□□ -0.42
CHD2-211ENST00000627460 DHX29Q7Z478 1369 aaKnown RBP12.4□□□□□ -0.42
CHD2-211ENST00000627460 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
CHD2-211ENST00000627460 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
CHD2-211ENST00000627460 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
CHD2-211ENST00000627460 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
CHD2-211ENST00000627460 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
CHD2-211ENST00000627460 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
CHD2-211ENST00000627460 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
CHD2-211ENST00000627460 PKD2Q13563 968 aa12.37□□□□□ -0.43
CHD2-211ENST00000627460 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
CHD2-211ENST00000627460 KIDINS220Q9ULH0 1771 aa12.36□□□□□ -0.43
CHD2-211ENST00000627460 A2MP01023 1474 aa12.36□□□□□ -0.43
CHD2-211ENST00000627460 SIN3AQ96ST3 1273 aa12.36□□□□□ -0.43
CHD2-211ENST00000627460 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
CHD2-211ENST00000627460 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
CHD2-211ENST00000627460 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
CHD2-211ENST00000627460 BCORL1Q5H9F3 1711 aa12.34□□□□□ -0.43
CHD2-211ENST00000627460 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
CHD2-211ENST00000627460 PRDM15P57071 1507 aaPredicted RBP12.33□□□□□ -0.44
CHD2-211ENST00000627460 ATP10AO60312 1499 aa12.33□□□□□ -0.44
CHD2-211ENST00000627460 RNF17Q9BXT8 1623 aaKnown RBP12.32□□□□□ -0.44
CHD2-211ENST00000627460 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
CHD2-211ENST00000627460 ABCB7O75027 752 aa12.31□□□□□ -0.44
CHD2-211ENST00000627460 TET3O43151 1660 aa12.31□□□□□ -0.44
CHD2-211ENST00000627460 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
CHD2-211ENST00000627460 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
CHD2-211ENST00000627460 KIF3BO15066 747 aa12.3□□□□□ -0.44
CHD2-211ENST00000627460 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
CHD2-211ENST00000627460 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
CHD2-211ENST00000627460 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
CHD2-211ENST00000627460 REREQ9P2R6 1566 aa12.29□□□□□ -0.44
CHD2-211ENST00000627460 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
CHD2-211ENST00000627460 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
CHD2-211ENST00000627460 RAPGEF3O95398 923 aa12.27□□□□□ -0.45
CHD2-211ENST00000627460 TSPOAP1O95153 1857 aa12.27□□□□□ -0.45
CHD2-211ENST00000627460 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
CHD2-211ENST00000627460 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
CHD2-211ENST00000627460 DSG3P32926 999 aa12.26□□□□□ -0.45
CHD2-211ENST00000627460 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
CHD2-211ENST00000627460 TRPM2O94759 1503 aa12.25□□□□□ -0.45
CHD2-211ENST00000627460 AGLP35573 1532 aa12.24□□□□□ -0.45
CHD2-211ENST00000627460 EFCAB6Q5THR3 1501 aa12.24□□□□□ -0.45
CHD2-211ENST00000627460 MROH1Q8NDA8 1641 aa12.24□□□□□ -0.45
CHD2-211ENST00000627460 L3MBTL2Q969R5 705 aa12.24□□□□□ -0.45
CHD2-211ENST00000627460 NEURL4Q96JN8 1562 aa12.24□□□□□ -0.45
CHD2-211ENST00000627460 PTPRTO14522 1441 aa12.23□□□□□ -0.45
CHD2-211ENST00000627460 SPHKAPQ2M3C7 1700 aa12.23□□□□□ -0.45
CHD2-211ENST00000627460 E9PCH4 1651 aa12.22□□□□□ -0.45
CHD2-211ENST00000627460 UHRF1BP1Q6BDS2 1440 aa12.21□□□□□ -0.45
CHD2-211ENST00000627460 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
CHD2-211ENST00000627460 DIEXFQ68CQ4 756 aaKnown RBP12.21□□□□□ -0.45
CHD2-211ENST00000627460 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.46
CHD2-211ENST00000627460 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
CHD2-211ENST00000627460 WASHC2CQ9Y4E1 1318 aa12.2□□□□□ -0.46
CHD2-211ENST00000627460 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
CHD2-211ENST00000627460 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
CHD2-211ENST00000627460 GGT6Q6P531 493 aa12.19□□□□□ -0.46
CHD2-211ENST00000627460 PLA2R1Q13018 1463 aa12.19□□□□□ -0.46
CHD2-211ENST00000627460 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
CHD2-211ENST00000627460 ABCC3O15438 1527 aa12.18□□□□□ -0.46
CHD2-211ENST00000627460 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHD2-211ENST00000627460 CEP152O94986 1710 aa12.17□□□□□ -0.46
CHD2-211ENST00000627460 CAMSAP1Q5T5Y3 1602 aa12.16□□□□□ -0.46
CHD2-211ENST00000627460 RALGAPBQ86X10 1494 aa12.15□□□□□ -0.46
CHD2-211ENST00000627460 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
CHD2-211ENST00000627460 KIF1BO60333 1816 aa12.14□□□□□ -0.47
CHD2-211ENST00000627460 NPATQ14207 1427 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms