RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.5
CHRDL2-210ENST00000622063 RNF17Q9BXT8 1623 aaKnown RBP30.61■■■□□ 2.49
CHRDL2-210ENST00000622063 PPP6R1Q9UPN7 881 aa30.61■■■□□ 2.49
CHRDL2-210ENST00000622063 ESF1Q9H501 851 aaKnown RBP30.6■■■□□ 2.49
CHRDL2-210ENST00000622063 RAB3GAP2Q9H2M9 1393 aa30.59■■■□□ 2.49
CHRDL2-210ENST00000622063 CCER1Q8TC90 406 aaPredicted RBP30.58■■■□□ 2.49
CHRDL2-210ENST00000622063 KANK1Q14678 1352 aa30.57■■■□□ 2.48
CHRDL2-210ENST00000622063 DEPDC5O75140 1603 aa30.57■■■□□ 2.48
CHRDL2-210ENST00000622063 WASHC2CQ9Y4E1 1318 aa30.57■■■□□ 2.48
CHRDL2-210ENST00000622063 MROH1Q8NDA8 1641 aa30.55■■■□□ 2.48
CHRDL2-210ENST00000622063 PRDM15P57071 1507 aaPredicted RBP30.54■■■□□ 2.48
CHRDL2-210ENST00000622063 TRIM52Q96A61 297 aa30.54■■■□□ 2.48
CHRDL2-210ENST00000622063 NUP155O75694 1391 aa30.53■■■□□ 2.48
CHRDL2-210ENST00000622063 ADAMTSL3P82987 1691 aa30.52■■■□□ 2.48
CHRDL2-210ENST00000622063 UNC13BO14795 1591 aa30.52■■■□□ 2.48
CHRDL2-210ENST00000622063 ACIN1Q9UKV3 1341 aaKnown RBP30.51■■■□□ 2.47
CHRDL2-210ENST00000622063 KDM4FA0A1W2PPD8 638 aa30.5■■■□□ 2.47
CHRDL2-210ENST00000622063 KDM5DQ9BY66 1539 aa30.49■■■□□ 2.47
CHRDL2-210ENST00000622063 MADDQ8WXG6 1647 aa30.49■■■□□ 2.47
CHRDL2-210ENST00000622063 FER1L4A9Z1Z3 1794 aa30.48■■■□□ 2.47
CHRDL2-210ENST00000622063 CNTLNQ9NXG0 1405 aa30.48■■■□□ 2.47
CHRDL2-210ENST00000622063 FAM135AQ9P2D6 1515 aa30.47■■■□□ 2.47
CHRDL2-210ENST00000622063 ABCC3O15438 1527 aa30.46■■■□□ 2.47
CHRDL2-210ENST00000622063 DHX57Q6P158 1386 aaKnown RBP30.46■■■□□ 2.47
CHRDL2-210ENST00000622063 VWDEQ8N2E2 1590 aa30.45■■■□□ 2.46
CHRDL2-210ENST00000622063 CLTCQ00610 1675 aaKnown RBP30.44■■■□□ 2.46
CHRDL2-210ENST00000622063 ZC3H13Q5T200 1668 aaKnown RBP30.43■■■□□ 2.46
CHRDL2-210ENST00000622063 RIMS1Q86UR5 1692 aaKnown RBP30.41■■■□□ 2.46
CHRDL2-210ENST00000622063 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
CHRDL2-210ENST00000622063 IQGAP3Q86VI3 1631 aa30.41■■■□□ 2.46
CHRDL2-210ENST00000622063 CEP152O94986 1710 aa30.4■■■□□ 2.46
CHRDL2-210ENST00000622063 ZEB1P37275 1124 aaPredicted RBP30.4■■■□□ 2.46
CHRDL2-210ENST00000622063 LMTK2Q8IWU2 1503 aa30.39■■■□□ 2.46
CHRDL2-210ENST00000622063 PLPPR3Q6T4P5 718 aa30.38■■■□□ 2.45
CHRDL2-210ENST00000622063 SLC4A1APQ9BWU0 796 aaKnown RBP30.37■■■□□ 2.45
CHRDL2-210ENST00000622063 CEBPAP49715 358 aaPredicted RBP30.36■■■□□ 2.45
CHRDL2-210ENST00000622063 MROH2AA6NES4 1674 aa30.36■■■□□ 2.45
CHRDL2-210ENST00000622063 PTPRMP28827 1452 aa30.35■■■□□ 2.45
CHRDL2-210ENST00000622063 PZPP20742 1482 aa30.35■■■□□ 2.45
CHRDL2-210ENST00000622063 CAMSAP1Q5T5Y3 1602 aa30.34■■■□□ 2.45
CHRDL2-210ENST00000622063 MPHOSPH9Q99550 1183 aa30.33■■■□□ 2.45
CHRDL2-210ENST00000622063 TET3O43151 1660 aa30.32■■■□□ 2.44
CHRDL2-210ENST00000622063 EFCAB6Q5THR3 1501 aa30.31■■■□□ 2.44
CHRDL2-210ENST00000622063 ARHGAP31Q2M1Z3 1444 aa30.31■■■□□ 2.44
CHRDL2-210ENST00000622063 PKD2Q13563 968 aa30.29■■■□□ 2.44
CHRDL2-210ENST00000622063 NPATQ14207 1427 aa30.29■■■□□ 2.44
CHRDL2-210ENST00000622063 C3P01024 1663 aa30.29■■■□□ 2.44
CHRDL2-210ENST00000622063 FBXO31Q5XUX0 539 aaPredicted RBP30.27■■■□□ 2.44
CHRDL2-210ENST00000622063 RPRD2Q5VT52 1461 aaKnown RBP30.24■■■□□ 2.43
CHRDL2-210ENST00000622063 E9PCH4 1651 aa30.22■■■□□ 2.43
CHRDL2-210ENST00000622063 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
CHRDL2-210ENST00000622063 FOXD1Q16676 465 aa30.2■■■□□ 2.43
CHRDL2-210ENST00000622063 CFAP65Q6ZU64 1925 aaKnown RBP30.18■■■□□ 2.42
CHRDL2-210ENST00000622063 ERVK-7P63135 1459 aa30.18■■■□□ 2.42
CHRDL2-210ENST00000622063 PREX1Q8TCU6 1659 aa30.15■■■□□ 2.42
CHRDL2-210ENST00000622063 TNRQ92752 1358 aa30.15■■■□□ 2.42
CHRDL2-210ENST00000622063 SPATA31D1Q6ZQQ2 1576 aa30.14■■■□□ 2.42
CHRDL2-210ENST00000622063 NOS1P29475 1434 aa30.14■■■□□ 2.42
CHRDL2-210ENST00000622063 PTPRTO14522 1441 aa30.1■■■□□ 2.41
CHRDL2-210ENST00000622063 SLC52A1Q9NWF4 448 aa30.07■■■□□ 2.4
CHRDL2-210ENST00000622063 SPHKAPQ2M3C7 1700 aa30.06■■■□□ 2.4
CHRDL2-210ENST00000622063 SETD1BQ9UPS6 1966 aaKnown RBP30.06■■■□□ 2.4
CHRDL2-210ENST00000622063 SYNMO15061 1565 aa30.06■■■□□ 2.4
CHRDL2-210ENST00000622063 PLA2R1Q13018 1463 aa30.06■■■□□ 2.4
CHRDL2-210ENST00000622063 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
CHRDL2-210ENST00000622063 IDI1Q13907 227 aa30.03■■■□□ 2.4
CHRDL2-210ENST00000622063 TRPM2O94759 1503 aa30.03■■■□□ 2.4
CHRDL2-210ENST00000622063 ANKRD30BQ9BXX2 1392 aa30.01■■■□□ 2.39
CHRDL2-210ENST00000622063 NLRP1Q9C000 1473 aa30.01■■■□□ 2.39
CHRDL2-210ENST00000622063 UHRF1BP1Q6BDS2 1440 aa30.01■■■□□ 2.39
CHRDL2-210ENST00000622063 UGGT1Q9NYU2 1555 aa29.99■■■□□ 2.39
CHRDL2-210ENST00000622063 MYO3AQ8NEV4 1616 aa29.99■■■□□ 2.39
CHRDL2-210ENST00000622063 CCDC144AA2RUR9 1427 aa29.97■■■□□ 2.39
CHRDL2-210ENST00000622063 STAG3Q9UJ98 1225 aa29.96■■■□□ 2.39
CHRDL2-210ENST00000622063 PIK3C2BO00750 1634 aa29.95■■■□□ 2.38
CHRDL2-210ENST00000622063 A2ML1A8K2U0 1454 aa29.94■■■□□ 2.38
CHRDL2-210ENST00000622063 CHGAP10645 457 aaKnown RBP29.94■■■□□ 2.38
CHRDL2-210ENST00000622063 CLTCL1P53675 1640 aa29.93■■■□□ 2.38
CHRDL2-210ENST00000622063 CEP170BQ9Y4F5 1589 aaPredicted RBP29.92■■■□□ 2.38
CHRDL2-210ENST00000622063 SIN3AQ96ST3 1273 aa29.9■■■□□ 2.38
CHRDL2-210ENST00000622063 THEMISQ8N1K5 641 aaPredicted RBP29.88■■■□□ 2.37
CHRDL2-210ENST00000622063 ZNF142P52746 1687 aaPredicted RBP29.87■■■□□ 2.37
CHRDL2-210ENST00000622063 LMTK3Q96Q04 1460 aa29.87■■■□□ 2.37
CHRDL2-210ENST00000622063 ADGRB3O60242 1522 aa29.85■■■□□ 2.37
CHRDL2-210ENST00000622063 UBR1Q8IWV7 1749 aa29.83■■■□□ 2.37
CHRDL2-210ENST00000622063 TMEM131LA2VDJ0 1609 aa29.83■■■□□ 2.37
CHRDL2-210ENST00000622063 KIF1BO60333 1816 aa29.82■■■□□ 2.36
CHRDL2-210ENST00000622063 ZNF326Q5BKZ1 582 aaKnown RBP29.82■■■□□ 2.36
CHRDL2-210ENST00000622063 KDM5AP29375 1690 aaKnown RBP29.81■■■□□ 2.36
CHRDL2-210ENST00000622063 HSPA2P54652 639 aa29.81■■■□□ 2.36
CHRDL2-210ENST00000622063 NEUROD1Q13562 356 aa29.81■■■□□ 2.36
CHRDL2-210ENST00000622063 RGL3Q3MIN7 710 aa29.79■■■□□ 2.36
CHRDL2-210ENST00000622063 SPATA31E1Q6ZUB1 1445 aa29.76■■■□□ 2.36
CHRDL2-210ENST00000622063 TMEM2Q9UHN6 1383 aa29.75■■■□□ 2.35
CHRDL2-210ENST00000622063 MYO5BQ9ULV0 1848 aa29.75■■■□□ 2.35
CHRDL2-210ENST00000622063 HDGFP51858 240 aaKnown RBP29.72■■■□□ 2.35
CHRDL2-210ENST00000622063 NEURL4Q96JN8 1562 aa29.71■■■□□ 2.35
CHRDL2-210ENST00000622063 EID1Q9Y6B2 187 aa29.71■■■□□ 2.35
CHRDL2-210ENST00000622063 ANKLE2Q86XL3 938 aa29.7■■■□□ 2.35
CHRDL2-210ENST00000622063 SLIT1O75093 1534 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms