RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 PANK1Q8TE04 598 aa17.96■□□□□ 0.46
SYN2-205ENST00000620175 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.46
SYN2-205ENST00000620175 APAF1O14727 1248 aa17.95■□□□□ 0.46
SYN2-205ENST00000620175 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
SYN2-205ENST00000620175 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
SYN2-205ENST00000620175 FOXD4L5Q5VV16 416 aaPredicted RBP17.93■□□□□ 0.46
SYN2-205ENST00000620175 FOXD4L4Q8WXT5 416 aaPredicted RBP17.93■□□□□ 0.46
SYN2-205ENST00000620175 KIF15Q9NS87 1388 aa17.93■□□□□ 0.46
SYN2-205ENST00000620175 BCAR3O75815 825 aa17.93■□□□□ 0.46
SYN2-205ENST00000620175 ROCK2O75116 1388 aaKnown RBP17.92■□□□□ 0.46
SYN2-205ENST00000620175 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
SYN2-205ENST00000620175 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
SYN2-205ENST00000620175 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
SYN2-205ENST00000620175 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
SYN2-205ENST00000620175 APBB1O00213 710 aa17.89■□□□□ 0.45
SYN2-205ENST00000620175 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
SYN2-205ENST00000620175 TMF1P82094 1093 aa17.89■□□□□ 0.45
SYN2-205ENST00000620175 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
SYN2-205ENST00000620175 TRAK2O60296 914 aa17.89■□□□□ 0.45
SYN2-205ENST00000620175 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
SYN2-205ENST00000620175 FOXD4L6Q3SYB3 417 aaPredicted RBP17.88■□□□□ 0.45
SYN2-205ENST00000620175 FOXD4L3Q6VB84 417 aaPredicted RBP17.88■□□□□ 0.45
SYN2-205ENST00000620175 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
SYN2-205ENST00000620175 NUP155O75694 1391 aa17.87■□□□□ 0.45
SYN2-205ENST00000620175 MPNDQ8N594 471 aa17.87■□□□□ 0.45
SYN2-205ENST00000620175 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
SYN2-205ENST00000620175 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
SYN2-205ENST00000620175 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
SYN2-205ENST00000620175 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.45
SYN2-205ENST00000620175 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.45
SYN2-205ENST00000620175 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.45
SYN2-205ENST00000620175 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.44
SYN2-205ENST00000620175 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
SYN2-205ENST00000620175 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
SYN2-205ENST00000620175 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
SYN2-205ENST00000620175 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
SYN2-205ENST00000620175 PRXQ9BXM0 1461 aa17.81■□□□□ 0.44
SYN2-205ENST00000620175 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
SYN2-205ENST00000620175 ESPNB1AK53 854 aa17.8■□□□□ 0.44
SYN2-205ENST00000620175 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
SYN2-205ENST00000620175 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
SYN2-205ENST00000620175 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
SYN2-205ENST00000620175 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
SYN2-205ENST00000620175 XRCC6P12956 609 aaKnown RBP eCLIP17.78■□□□□ 0.44
SYN2-205ENST00000620175 SEC24BO95487 1268 aa17.78■□□□□ 0.44
SYN2-205ENST00000620175 CHMP5Q9NZZ3 219 aa17.78■□□□□ 0.44
SYN2-205ENST00000620175 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
SYN2-205ENST00000620175 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.43
SYN2-205ENST00000620175 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.43
SYN2-205ENST00000620175 MCM4P33991 863 aa17.76■□□□□ 0.43
SYN2-205ENST00000620175 MRE11P49959 708 aa17.76■□□□□ 0.43
SYN2-205ENST00000620175 C22orf23Q9BZE7 217 aa17.76■□□□□ 0.43
SYN2-205ENST00000620175 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
SYN2-205ENST00000620175 NAIPQ13075 1403 aa17.75■□□□□ 0.43
SYN2-205ENST00000620175 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
SYN2-205ENST00000620175 GRPEL1Q9HAV7 217 aa17.74■□□□□ 0.43
SYN2-205ENST00000620175 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
SYN2-205ENST00000620175 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYN2-205ENST00000620175 PTPRGP23470 1445 aa17.74■□□□□ 0.43
SYN2-205ENST00000620175 MAPK8IP3Q9UPT6 1336 aa17.74■□□□□ 0.43
SYN2-205ENST00000620175 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
SYN2-205ENST00000620175 C8orf34Q49A92 452 aa17.73■□□□□ 0.43
SYN2-205ENST00000620175 RNF214Q8ND24 703 aa17.73■□□□□ 0.43
SYN2-205ENST00000620175 BRD4O60885 1362 aaPredicted RBP17.73■□□□□ 0.43
SYN2-205ENST00000620175 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
SYN2-205ENST00000620175 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYN2-205ENST00000620175 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
SYN2-205ENST00000620175 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
SYN2-205ENST00000620175 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
SYN2-205ENST00000620175 IGHDP01880 384 aa17.72■□□□□ 0.43
SYN2-205ENST00000620175 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
SYN2-205ENST00000620175 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
SYN2-205ENST00000620175 NCOA1Q15788 1441 aa17.71■□□□□ 0.43
SYN2-205ENST00000620175 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.42
SYN2-205ENST00000620175 PTPRKQ15262 1439 aa17.71■□□□□ 0.42
SYN2-205ENST00000620175 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
SYN2-205ENST00000620175 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
SYN2-205ENST00000620175 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
SYN2-205ENST00000620175 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
SYN2-205ENST00000620175 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
SYN2-205ENST00000620175 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
SYN2-205ENST00000620175 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
SYN2-205ENST00000620175 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
SYN2-205ENST00000620175 MYOM3Q5VTT5 1437 aa17.67■□□□□ 0.42
SYN2-205ENST00000620175 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
SYN2-205ENST00000620175 ZHX1Q9UKY1 873 aaPredicted RBP17.67■□□□□ 0.42
SYN2-205ENST00000620175 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
SYN2-205ENST00000620175 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 ANKRD45Q5TZF3 282 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
SYN2-205ENST00000620175 CAVIN1Q6NZI2 390 aaKnown RBP17.64■□□□□ 0.41
SYN2-205ENST00000620175 E9PSI1 815 aa17.64■□□□□ 0.41
SYN2-205ENST00000620175 MLECQ14165 292 aa17.64■□□□□ 0.41
SYN2-205ENST00000620175 PRG4Q92954 1404 aaPredicted RBP17.62■□□□□ 0.41
SYN2-205ENST00000620175 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
SYN2-205ENST00000620175 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
SYN2-205ENST00000620175 CLCN1P35523 988 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms