RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MIER1Q8N108 512 aa18.16■□□□□ 0.5
TNFAIP3-209ENST00000619035 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
TNFAIP3-209ENST00000619035 TEX14Q8IWB6 1497 aa18.15■□□□□ 0.5
TNFAIP3-209ENST00000619035 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
TNFAIP3-209ENST00000619035 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
TNFAIP3-209ENST00000619035 DEPDC5O75140 1603 aa18.13■□□□□ 0.49
TNFAIP3-209ENST00000619035 RICTORQ6R327 1708 aa18.11■□□□□ 0.49
TNFAIP3-209ENST00000619035 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
TNFAIP3-209ENST00000619035 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
TNFAIP3-209ENST00000619035 KIF13AQ9H1H9 1805 aa18.09■□□□□ 0.49
TNFAIP3-209ENST00000619035 KIF3BO15066 747 aa18.09■□□□□ 0.49
TNFAIP3-209ENST00000619035 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
TNFAIP3-209ENST00000619035 A2MP01023 1474 aa18.08■□□□□ 0.48
TNFAIP3-209ENST00000619035 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
TNFAIP3-209ENST00000619035 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
TNFAIP3-209ENST00000619035 PRDM15P57071 1507 aaPredicted RBP18.05■□□□□ 0.48
TNFAIP3-209ENST00000619035 ZMYM4Q5VZL5 1548 aa18.05■□□□□ 0.48
TNFAIP3-209ENST00000619035 KANK1Q14678 1352 aa18.05■□□□□ 0.48
TNFAIP3-209ENST00000619035 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
TNFAIP3-209ENST00000619035 ATP10AO60312 1499 aa18.05■□□□□ 0.48
TNFAIP3-209ENST00000619035 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
TNFAIP3-209ENST00000619035 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
TNFAIP3-209ENST00000619035 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
TNFAIP3-209ENST00000619035 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
TNFAIP3-209ENST00000619035 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.47
TNFAIP3-209ENST00000619035 FRMPD1Q5SYB0 1578 aa18.02■□□□□ 0.47
TNFAIP3-209ENST00000619035 TET3O43151 1660 aa18.02■□□□□ 0.47
TNFAIP3-209ENST00000619035 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
TNFAIP3-209ENST00000619035 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
TNFAIP3-209ENST00000619035 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
TNFAIP3-209ENST00000619035 PLA2R1Q13018 1463 aa18■□□□□ 0.47
TNFAIP3-209ENST00000619035 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
TNFAIP3-209ENST00000619035 E9PCH4 1651 aa17.98■□□□□ 0.47
TNFAIP3-209ENST00000619035 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
TNFAIP3-209ENST00000619035 GGT6Q6P531 493 aa17.96■□□□□ 0.47
TNFAIP3-209ENST00000619035 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
TNFAIP3-209ENST00000619035 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
TNFAIP3-209ENST00000619035 REREQ9P2R6 1566 aa17.95■□□□□ 0.46
TNFAIP3-209ENST00000619035 PTPRTO14522 1441 aa17.94■□□□□ 0.46
TNFAIP3-209ENST00000619035 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
TNFAIP3-209ENST00000619035 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
TNFAIP3-209ENST00000619035 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFAIP3-209ENST00000619035 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
TNFAIP3-209ENST00000619035 TRPM2O94759 1503 aa17.92■□□□□ 0.46
TNFAIP3-209ENST00000619035 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
TNFAIP3-209ENST00000619035 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
TNFAIP3-209ENST00000619035 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
TNFAIP3-209ENST00000619035 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
TNFAIP3-209ENST00000619035 CEP152O94986 1710 aa17.9■□□□□ 0.46
TNFAIP3-209ENST00000619035 ZC3H13Q5T200 1668 aaKnown RBP17.89■□□□□ 0.45
TNFAIP3-209ENST00000619035 AGLP35573 1532 aa17.89■□□□□ 0.45
TNFAIP3-209ENST00000619035 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
TNFAIP3-209ENST00000619035 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
TNFAIP3-209ENST00000619035 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
TNFAIP3-209ENST00000619035 WASHC2CQ9Y4E1 1318 aa17.87■□□□□ 0.45
TNFAIP3-209ENST00000619035 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
TNFAIP3-209ENST00000619035 ABCC3O15438 1527 aa17.86■□□□□ 0.45
TNFAIP3-209ENST00000619035 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
TNFAIP3-209ENST00000619035 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
TNFAIP3-209ENST00000619035 COL17A1Q9UMD9 1497 aaPredicted RBP17.85■□□□□ 0.45
TNFAIP3-209ENST00000619035 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
TNFAIP3-209ENST00000619035 RALGAPBQ86X10 1494 aa17.84■□□□□ 0.45
TNFAIP3-209ENST00000619035 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.45
TNFAIP3-209ENST00000619035 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
TNFAIP3-209ENST00000619035 UGGT1Q9NYU2 1555 aa17.82■□□□□ 0.44
TNFAIP3-209ENST00000619035 CAMSAP1Q5T5Y3 1602 aa17.82■□□□□ 0.44
TNFAIP3-209ENST00000619035 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
TNFAIP3-209ENST00000619035 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
TNFAIP3-209ENST00000619035 USP47Q96K76 1375 aa17.81■□□□□ 0.44
TNFAIP3-209ENST00000619035 NPATQ14207 1427 aa17.81■□□□□ 0.44
TNFAIP3-209ENST00000619035 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
TNFAIP3-209ENST00000619035 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
TNFAIP3-209ENST00000619035 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
TNFAIP3-209ENST00000619035 CFAP65Q6ZU64 1925 aaKnown RBP17.77■□□□□ 0.44
TNFAIP3-209ENST00000619035 KIF1BO60333 1816 aa17.77■□□□□ 0.44
TNFAIP3-209ENST00000619035 TRPM1Q7Z4N2 1603 aa17.77■□□□□ 0.43
TNFAIP3-209ENST00000619035 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
TNFAIP3-209ENST00000619035 NOS1P29475 1434 aa17.76■□□□□ 0.43
TNFAIP3-209ENST00000619035 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
TNFAIP3-209ENST00000619035 CHGAP10645 457 aaKnown RBP17.74■□□□□ 0.43
TNFAIP3-209ENST00000619035 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
TNFAIP3-209ENST00000619035 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
TNFAIP3-209ENST00000619035 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
TNFAIP3-209ENST00000619035 MLECQ14165 292 aa17.72■□□□□ 0.43
TNFAIP3-209ENST00000619035 LAMC1P11047 1609 aa17.71■□□□□ 0.43
TNFAIP3-209ENST00000619035 SIGLEC1Q9BZZ2 1709 aa17.71■□□□□ 0.43
TNFAIP3-209ENST00000619035 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
TNFAIP3-209ENST00000619035 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
TNFAIP3-209ENST00000619035 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
TNFAIP3-209ENST00000619035 MYOM2P54296 1465 aa17.68■□□□□ 0.42
TNFAIP3-209ENST00000619035 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
TNFAIP3-209ENST00000619035 ANP32CO43423 234 aa17.68■□□□□ 0.42
TNFAIP3-209ENST00000619035 PREX1Q8TCU6 1659 aa17.67■□□□□ 0.42
TNFAIP3-209ENST00000619035 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
TNFAIP3-209ENST00000619035 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms