RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 POGZQ7Z3K3 1410 aa35.97■■■■□ 3.35
VEGFC-202ENST00000618562 KDM5CP41229 1560 aa35.96■■■■□ 3.35
VEGFC-202ENST00000618562 PELP1Q8IZL8 1130 aaKnown RBP35.93■■■■□ 3.34
VEGFC-202ENST00000618562 DEPDC5O75140 1603 aa35.93■■■■□ 3.34
VEGFC-202ENST00000618562 MYT1LQ9UL68 1186 aa35.91■■■■□ 3.34
VEGFC-202ENST00000618562 DIP2BQ9P265 1576 aa35.9■■■■□ 3.34
VEGFC-202ENST00000618562 EIF2AK4Q9P2K8 1649 aaKnown RBP35.88■■■■□ 3.33
VEGFC-202ENST00000618562 DHX29Q7Z478 1369 aaKnown RBP35.88■■■■□ 3.33
VEGFC-202ENST00000618562 MLH3Q9UHC1 1453 aa35.85■■■■□ 3.33
VEGFC-202ENST00000618562 HECW2Q9P2P5 1572 aa35.85■■■■□ 3.33
VEGFC-202ENST00000618562 PLA2R1Q13018 1463 aa35.83■■■■□ 3.33
VEGFC-202ENST00000618562 NBPF8Q3BBV2 869 aa35.81■■■■□ 3.32
VEGFC-202ENST00000618562 FAM69CQ0P6D2 419 aa35.8■■■■□ 3.32
VEGFC-202ENST00000618562 HIRIP3Q9BW71 556 aaPredicted RBP35.8■■■■□ 3.32
VEGFC-202ENST00000618562 VWDEQ8N2E2 1590 aa35.78■■■■□ 3.32
VEGFC-202ENST00000618562 MROH1Q8NDA8 1641 aa35.78■■■■□ 3.32
VEGFC-202ENST00000618562 RICTORQ6R327 1708 aa35.77■■■■□ 3.32
VEGFC-202ENST00000618562 A2MP01023 1474 aa35.76■■■■□ 3.32
VEGFC-202ENST00000618562 KIF3BO15066 747 aa35.76■■■■□ 3.32
VEGFC-202ENST00000618562 PRDM15P57071 1507 aaPredicted RBP35.76■■■■□ 3.32
VEGFC-202ENST00000618562 E9PCH4 1651 aa35.76■■■■□ 3.31
VEGFC-202ENST00000618562 CCDC144AA2RUR9 1427 aa35.75■■■■□ 3.31
VEGFC-202ENST00000618562 ATP10AO60312 1499 aa35.75■■■■□ 3.31
VEGFC-202ENST00000618562 RAPGEF3O95398 923 aa35.75■■■■□ 3.31
VEGFC-202ENST00000618562 ABCA6Q8N139 1617 aa35.74■■■■□ 3.31
VEGFC-202ENST00000618562 FRMPD1Q5SYB0 1578 aa35.73■■■■□ 3.31
VEGFC-202ENST00000618562 TET3O43151 1660 aa35.72■■■■□ 3.31
VEGFC-202ENST00000618562 PPRC1Q5VV67 1664 aaKnown RBP35.72■■■■□ 3.31
VEGFC-202ENST00000618562 TSPOAP1O95153 1857 aa35.69■■■■□ 3.3
VEGFC-202ENST00000618562 KANK1Q14678 1352 aa35.68■■■■□ 3.3
VEGFC-202ENST00000618562 RNF17Q9BXT8 1623 aaKnown RBP35.67■■■■□ 3.3
VEGFC-202ENST00000618562 UHRF1BP1Q6BDS2 1440 aa35.65■■■■□ 3.3
VEGFC-202ENST00000618562 HSPA5P11021 654 aaKnown RBP35.63■■■■□ 3.29
VEGFC-202ENST00000618562 DIP2CQ9Y2E4 1556 aa35.63■■■■□ 3.29
VEGFC-202ENST00000618562 BCORL1Q5H9F3 1711 aa35.63■■■■□ 3.29
VEGFC-202ENST00000618562 DDX10Q13206 875 aaKnown RBP35.63■■■■□ 3.29
VEGFC-202ENST00000618562 KIF13AQ9H1H9 1805 aa35.62■■■■□ 3.29
VEGFC-202ENST00000618562 SPHKAPQ2M3C7 1700 aa35.61■■■■□ 3.29
VEGFC-202ENST00000618562 EIF4G2P78344 907 aaKnown RBP eCLIP35.61■■■■□ 3.29
VEGFC-202ENST00000618562 TRPM2O94759 1503 aa35.58■■■■□ 3.29
VEGFC-202ENST00000618562 PTPRTO14522 1441 aa35.58■■■■□ 3.29
VEGFC-202ENST00000618562 ZNF326Q5BKZ1 582 aaKnown RBP35.56■■■■□ 3.28
VEGFC-202ENST00000618562 DCAF11Q8TEB1 546 aa35.55■■■■□ 3.28
VEGFC-202ENST00000618562 CEP152O94986 1710 aa35.55■■■■□ 3.28
VEGFC-202ENST00000618562 LMTK2Q8IWU2 1503 aa35.54■■■■□ 3.28
VEGFC-202ENST00000618562 EFCAB6Q5THR3 1501 aa35.53■■■■□ 3.28
VEGFC-202ENST00000618562 ZMYM4Q5VZL5 1548 aa35.53■■■■□ 3.28
VEGFC-202ENST00000618562 YEATS2Q9ULM3 1422 aa35.53■■■■□ 3.28
VEGFC-202ENST00000618562 RALGAPBQ86X10 1494 aa35.52■■■■□ 3.28
VEGFC-202ENST00000618562 SPATA31E1Q6ZUB1 1445 aa35.52■■■■□ 3.28
VEGFC-202ENST00000618562 KDM2AQ9Y2K7 1162 aa35.52■■■■□ 3.28
VEGFC-202ENST00000618562 RGL3Q3MIN7 710 aa35.49■■■■□ 3.27
VEGFC-202ENST00000618562 CLTCL1P53675 1640 aa35.48■■■■□ 3.27
VEGFC-202ENST00000618562 GGT6Q6P531 493 aa35.44■■■■□ 3.26
VEGFC-202ENST00000618562 PRAG1Q86YV5 1406 aa35.43■■■■□ 3.26
VEGFC-202ENST00000618562 CCER2I3L3R5 266 aa35.41■■■■□ 3.26
VEGFC-202ENST00000618562 WASHC2AQ641Q2 1341 aa35.39■■■■□ 3.26
VEGFC-202ENST00000618562 TRPM1Q7Z4N2 1603 aa35.39■■■■□ 3.26
VEGFC-202ENST00000618562 ABCC3O15438 1527 aa35.39■■■■□ 3.26
VEGFC-202ENST00000618562 USP47Q96K76 1375 aa35.38■■■■□ 3.25
VEGFC-202ENST00000618562 ANP32CO43423 234 aa35.36■■■■□ 3.25
VEGFC-202ENST00000618562 UGGT1Q9NYU2 1555 aa35.34■■■■□ 3.25
VEGFC-202ENST00000618562 NPATQ14207 1427 aa35.33■■■■□ 3.25
VEGFC-202ENST00000618562 POLR1AO95602 1720 aaPredicted RBP35.33■■■■□ 3.25
VEGFC-202ENST00000618562 C11orf95C9JLR9 678 aaPredicted RBP35.33■■■■□ 3.25
VEGFC-202ENST00000618562 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.24
VEGFC-202ENST00000618562 WASHC2CQ9Y4E1 1318 aa35.32■■■■□ 3.24
VEGFC-202ENST00000618562 CARD11Q9BXL7 1154 aa35.31■■■■□ 3.24
VEGFC-202ENST00000618562 COL17A1Q9UMD9 1497 aaPredicted RBP35.31■■■■□ 3.24
VEGFC-202ENST00000618562 NEURL4Q96JN8 1562 aa35.3■■■■□ 3.24
VEGFC-202ENST00000618562 ROCK2O75116 1388 aaKnown RBP35.28■■■■□ 3.24
VEGFC-202ENST00000618562 ZC3H13Q5T200 1668 aaKnown RBP35.28■■■■□ 3.24
VEGFC-202ENST00000618562 CCDC7Q96M83 1385 aa35.27■■■■□ 3.24
VEGFC-202ENST00000618562 CFAP65Q6ZU64 1925 aaKnown RBP35.27■■■■□ 3.24
VEGFC-202ENST00000618562 REREQ9P2R6 1566 aa35.26■■■■□ 3.24
VEGFC-202ENST00000618562 KIF1BO60333 1816 aa35.26■■■■□ 3.24
VEGFC-202ENST00000618562 MADDQ8WXG6 1647 aa35.23■■■■□ 3.23
VEGFC-202ENST00000618562 GPRASP1Q5JY77 1395 aa35.22■■■■□ 3.23
VEGFC-202ENST00000618562 SIGLEC1Q9BZZ2 1709 aa35.22■■■■□ 3.23
VEGFC-202ENST00000618562 LAMC1P11047 1609 aa35.21■■■■□ 3.23
VEGFC-202ENST00000618562 NBPF1Q3BBV0 1214 aa35.2■■■■□ 3.22
VEGFC-202ENST00000618562 KIF7Q2M1P5 1343 aa35.19■■■■□ 3.22
VEGFC-202ENST00000618562 MROH2AA6NES4 1674 aa35.19■■■■□ 3.22
VEGFC-202ENST00000618562 CNTLNQ9NXG0 1405 aa35.19■■■■□ 3.22
VEGFC-202ENST00000618562 AGLP35573 1532 aa35.17■■■■□ 3.22
VEGFC-202ENST00000618562 SUPT16HQ9Y5B9 1047 aaKnown RBP35.17■■■■□ 3.22
VEGFC-202ENST00000618562 ARHGAP31Q2M1Z3 1444 aa35.16■■■■□ 3.22
VEGFC-202ENST00000618562 ARHGEF40Q8TER5 1519 aa35.16■■■■□ 3.22
VEGFC-202ENST00000618562 STAC3Q96MF2 364 aa35.15■■■■□ 3.22
VEGFC-202ENST00000618562 NOS1P29475 1434 aa35.15■■■■□ 3.22
VEGFC-202ENST00000618562 ADGRB3O60242 1522 aa35.13■■■■□ 3.21
VEGFC-202ENST00000618562 IFT172Q9UG01 1749 aa35.13■■■■□ 3.21
VEGFC-202ENST00000618562 ST20-MTHFSA0A0A6YYL1 179 aa35.11■■■■□ 3.21
VEGFC-202ENST00000618562 SYNMO15061 1565 aa35.1■■■■□ 3.21
VEGFC-202ENST00000618562 PIK3C2BO00750 1634 aa35.08■■■■□ 3.21
VEGFC-202ENST00000618562 MYOM2P54296 1465 aa35.07■■■■□ 3.2
VEGFC-202ENST00000618562 ARID4BQ4LE39 1312 aaPredicted RBP35.03■■■■□ 3.2
VEGFC-202ENST00000618562 PREX1Q8TCU6 1659 aa35.02■■■■□ 3.2
VEGFC-202ENST00000618562 KIAA1210Q9ULL0 1709 aa35.02■■■■□ 3.2
VEGFC-202ENST00000618562 PPLO60437 1756 aa34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms