RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CNTLNQ9NXG0 1405 aa15.67■□□□□ 0.1
MATR3-227ENST00000618441 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
MATR3-227ENST00000618441 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
MATR3-227ENST00000618441 ERBB4Q15303 1308 aa15.66■□□□□ 0.1
MATR3-227ENST00000618441 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
MATR3-227ENST00000618441 RRBP1Q9P2E9 1410 aaKnown RBP15.66■□□□□ 0.1
MATR3-227ENST00000618441 TRAK2O60296 914 aa15.65■□□□□ 0.1
MATR3-227ENST00000618441 GRPEL1Q9HAV7 217 aa15.65■□□□□ 0.1
MATR3-227ENST00000618441 MRE11P49959 708 aa15.65■□□□□ 0.1
MATR3-227ENST00000618441 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
MATR3-227ENST00000618441 ZNF592Q92610 1267 aa15.63■□□□□ 0.09
MATR3-227ENST00000618441 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
MATR3-227ENST00000618441 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
MATR3-227ENST00000618441 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
MATR3-227ENST00000618441 CCDC7Q96M83 1385 aa15.61■□□□□ 0.09
MATR3-227ENST00000618441 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
MATR3-227ENST00000618441 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
MATR3-227ENST00000618441 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
MATR3-227ENST00000618441 KIF7Q2M1P5 1343 aa15.6■□□□□ 0.09
MATR3-227ENST00000618441 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
MATR3-227ENST00000618441 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
MATR3-227ENST00000618441 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
MATR3-227ENST00000618441 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
MATR3-227ENST00000618441 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
MATR3-227ENST00000618441 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
MATR3-227ENST00000618441 UQCRHP07919 91 aa15.59■□□□□ 0.09
MATR3-227ENST00000618441 MCM4P33991 863 aa15.59■□□□□ 0.09
MATR3-227ENST00000618441 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
MATR3-227ENST00000618441 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
MATR3-227ENST00000618441 CBX1P83916 185 aa15.57■□□□□ 0.08
MATR3-227ENST00000618441 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
MATR3-227ENST00000618441 E9PSI1 815 aa15.56■□□□□ 0.08
MATR3-227ENST00000618441 JPH4Q96JJ6 628 aa15.56■□□□□ 0.08
MATR3-227ENST00000618441 KTN1Q86UP2 1357 aaKnown RBP15.56■□□□□ 0.08
MATR3-227ENST00000618441 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
MATR3-227ENST00000618441 SEC24BO95487 1268 aa15.56■□□□□ 0.08
MATR3-227ENST00000618441 GTF2E1P29083 439 aaPredicted RBP15.56■□□□□ 0.08
MATR3-227ENST00000618441 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
MATR3-227ENST00000618441 XPCQ01831 940 aaPredicted RBP15.55■□□□□ 0.08
MATR3-227ENST00000618441 RSPH4AQ5TD94 716 aa15.55■□□□□ 0.08
MATR3-227ENST00000618441 BCCIPQ9P287 314 aaKnown RBP eCLIP15.54■□□□□ 0.08
MATR3-227ENST00000618441 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.53■□□□□ 0.08
MATR3-227ENST00000618441 STAC3Q96MF2 364 aa15.53■□□□□ 0.08
MATR3-227ENST00000618441 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
MATR3-227ENST00000618441 RIPK4P57078 832 aa15.52■□□□□ 0.07
MATR3-227ENST00000618441 ZNF644Q9H582 1327 aaPredicted RBP15.51■□□□□ 0.07
MATR3-227ENST00000618441 MPNDQ8N594 471 aa15.51■□□□□ 0.07
MATR3-227ENST00000618441 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
MATR3-227ENST00000618441 CGNQ9P2M7 1197 aaKnown RBP15.5■□□□□ 0.07
MATR3-227ENST00000618441 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
MATR3-227ENST00000618441 PPP4R3BQ5MIZ7 849 aa15.49■□□□□ 0.07
MATR3-227ENST00000618441 ZBTB22O15209 634 aa15.49■□□□□ 0.07
MATR3-227ENST00000618441 MFAP1P55081 439 aaKnown RBP15.48■□□□□ 0.07
MATR3-227ENST00000618441 SMAP1Q8IYB5 467 aaPredicted RBP15.48■□□□□ 0.07
MATR3-227ENST00000618441 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
MATR3-227ENST00000618441 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
MATR3-227ENST00000618441 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
MATR3-227ENST00000618441 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
MATR3-227ENST00000618441 TSC1Q92574 1164 aa15.47■□□□□ 0.07
MATR3-227ENST00000618441 NASPP49321 788 aaPredicted RBP15.47■□□□□ 0.07
MATR3-227ENST00000618441 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
MATR3-227ENST00000618441 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
MATR3-227ENST00000618441 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
MATR3-227ENST00000618441 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
MATR3-227ENST00000618441 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.06
MATR3-227ENST00000618441 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.46■□□□□ 0.06
MATR3-227ENST00000618441 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
MATR3-227ENST00000618441 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
MATR3-227ENST00000618441 CENPJQ9HC77 1338 aaPredicted RBP15.45■□□□□ 0.06
MATR3-227ENST00000618441 ZNF771Q7L3S4 317 aaPredicted RBP15.45■□□□□ 0.06
MATR3-227ENST00000618441 GAS2L3Q86XJ1 694 aa15.44■□□□□ 0.06
MATR3-227ENST00000618441 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
MATR3-227ENST00000618441 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
MATR3-227ENST00000618441 OFD1O75665 1012 aa15.43■□□□□ 0.06
MATR3-227ENST00000618441 CFDP1Q9UEE9 299 aaPredicted RBP15.43■□□□□ 0.06
MATR3-227ENST00000618441 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
MATR3-227ENST00000618441 JARID2Q92833 1246 aaPredicted RBP15.42■□□□□ 0.06
MATR3-227ENST00000618441 HSCBQ8IWL3 235 aa15.42■□□□□ 0.06
MATR3-227ENST00000618441 CERS3Q8IU89 383 aa15.42■□□□□ 0.06
MATR3-227ENST00000618441 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
MATR3-227ENST00000618441 SECISBP2LQ93073 1101 aaKnown RBP15.41■□□□□ 0.06
MATR3-227ENST00000618441 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
MATR3-227ENST00000618441 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
MATR3-227ENST00000618441 HSP90AB1P08238 724 aaKnown RBP15.41■□□□□ 0.06
MATR3-227ENST00000618441 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
MATR3-227ENST00000618441 ZNF830Q96NB3 372 aaPredicted RBP15.4■□□□□ 0.06
MATR3-227ENST00000618441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.063e-7■■■□□ 18.1
MATR3-227ENST00000618441 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
MATR3-227ENST00000618441 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
MATR3-227ENST00000618441 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
MATR3-227ENST00000618441 DDX49Q9Y6V7 483 aaKnown RBP15.39■□□□□ 0.05
MATR3-227ENST00000618441 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
MATR3-227ENST00000618441 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
MATR3-227ENST00000618441 HMGB1P09429 215 aaKnown RBP15.38■□□□□ 0.05
MATR3-227ENST00000618441 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
MATR3-227ENST00000618441 CCDC173Q0VFZ6 552 aa15.37■□□□□ 0.05
MATR3-227ENST00000618441 PDE3BQ13370 1112 aa15.37■□□□□ 0.05
MATR3-227ENST00000618441 TRERF1Q96PN7 1200 aa15.37■□□□□ 0.05
MATR3-227ENST00000618441 CWC22Q9HCG8 908 aaKnown RBP15.37■□□□□ 0.05
MATR3-227ENST00000618441 CDK13Q14004 1512 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms