RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 MROH2AA6NES4 1674 aa28.8■■■□□ 2.2
SUSD3-205ENST00000617293 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
SUSD3-205ENST00000617293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.8■■■□□ 2.2
SUSD3-205ENST00000617293 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
SUSD3-205ENST00000617293 PTPRKQ15262 1439 aa28.79■■■□□ 2.2
SUSD3-205ENST00000617293 ADGRL2O95490 1459 aa28.78■■■□□ 2.2
SUSD3-205ENST00000617293 ERBINQ96RT1 1412 aa28.77■■■□□ 2.2
SUSD3-205ENST00000617293 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
SUSD3-205ENST00000617293 RNF17Q9BXT8 1623 aaKnown RBP28.75■■■□□ 2.19
SUSD3-205ENST00000617293 SETD1BQ9UPS6 1966 aaKnown RBP28.74■■■□□ 2.19
SUSD3-205ENST00000617293 KDM5DQ9BY66 1539 aa28.74■■■□□ 2.19
SUSD3-205ENST00000617293 LMTK3Q96Q04 1460 aa28.73■■■□□ 2.19
SUSD3-205ENST00000617293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.71■■■□□ 2.19
SUSD3-205ENST00000617293 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
SUSD3-205ENST00000617293 PREX1Q8TCU6 1659 aa28.69■■■□□ 2.18
SUSD3-205ENST00000617293 HSPA2P54652 639 aa28.68■■■□□ 2.18
SUSD3-205ENST00000617293 MROH1Q8NDA8 1641 aa28.68■■■□□ 2.18
SUSD3-205ENST00000617293 ROCK1Q13464 1354 aa28.67■■■□□ 2.18
SUSD3-205ENST00000617293 NPATQ14207 1427 aa28.67■■■□□ 2.18
SUSD3-205ENST00000617293 UHRF1BP1Q6BDS2 1440 aa28.67■■■□□ 2.18
SUSD3-205ENST00000617293 ANKRD50Q9ULJ7 1429 aa28.67■■■□□ 2.18
SUSD3-205ENST00000617293 ABCC3O15438 1527 aa28.64■■■□□ 2.18
SUSD3-205ENST00000617293 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
SUSD3-205ENST00000617293 ZC3H13Q5T200 1668 aaKnown RBP28.63■■■□□ 2.17
SUSD3-205ENST00000617293 CEP152O94986 1710 aa28.62■■■□□ 2.17
SUSD3-205ENST00000617293 KANK1Q14678 1352 aa28.62■■■□□ 2.17
SUSD3-205ENST00000617293 PRDM15P57071 1507 aaPredicted RBP28.61■■■□□ 2.17
SUSD3-205ENST00000617293 DEPDC5O75140 1603 aa28.61■■■□□ 2.17
SUSD3-205ENST00000617293 PZPP20742 1482 aa28.6■■■□□ 2.17
SUSD3-205ENST00000617293 CAMSAP1Q5T5Y3 1602 aa28.55■■■□□ 2.16
SUSD3-205ENST00000617293 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
SUSD3-205ENST00000617293 TNRQ92752 1358 aa28.52■■■□□ 2.16
SUSD3-205ENST00000617293 MYO3AQ8NEV4 1616 aa28.51■■■□□ 2.15
SUSD3-205ENST00000617293 VWDEQ8N2E2 1590 aa28.5■■■□□ 2.15
SUSD3-205ENST00000617293 ARHGAP31Q2M1Z3 1444 aa28.46■■■□□ 2.15
SUSD3-205ENST00000617293 LMTK2Q8IWU2 1503 aa28.46■■■□□ 2.15
SUSD3-205ENST00000617293 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.15
SUSD3-205ENST00000617293 ERVK-7P63135 1459 aa28.45■■■□□ 2.14
SUSD3-205ENST00000617293 UNC13BO14795 1591 aa28.44■■■□□ 2.14
SUSD3-205ENST00000617293 SPATA31D1Q6ZQQ2 1576 aa28.44■■■□□ 2.14
SUSD3-205ENST00000617293 ZNF142P52746 1687 aaPredicted RBP28.43■■■□□ 2.14
SUSD3-205ENST00000617293 NAIPQ13075 1403 aa28.43■■■□□ 2.14
SUSD3-205ENST00000617293 A2ML1A8K2U0 1454 aa28.42■■■□□ 2.14
SUSD3-205ENST00000617293 NUP155O75694 1391 aa28.4■■■□□ 2.14
SUSD3-205ENST00000617293 NLRP1Q9C000 1473 aa28.39■■■□□ 2.13
SUSD3-205ENST00000617293 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
SUSD3-205ENST00000617293 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
SUSD3-205ENST00000617293 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
SUSD3-205ENST00000617293 HFM1A2PYH4 1435 aa28.37■■■□□ 2.13
SUSD3-205ENST00000617293 TET3O43151 1660 aa28.35■■■□□ 2.13
SUSD3-205ENST00000617293 IQGAP3Q86VI3 1631 aa28.34■■■□□ 2.13
SUSD3-205ENST00000617293 DMRT2Q9Y5R5 561 aa28.33■■■□□ 2.13
SUSD3-205ENST00000617293 UGGT1Q9NYU2 1555 aa28.33■■■□□ 2.12
SUSD3-205ENST00000617293 THEMISQ8N1K5 641 aaPredicted RBP28.32■■■□□ 2.12
SUSD3-205ENST00000617293 NCKAP5LQ9HCH0 1330 aa28.32■■■□□ 2.12
SUSD3-205ENST00000617293 RPRD2Q5VT52 1461 aaKnown RBP28.3■■■□□ 2.12
SUSD3-205ENST00000617293 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
SUSD3-205ENST00000617293 PLA2R1Q13018 1463 aa28.28■■■□□ 2.12
SUSD3-205ENST00000617293 NOS1P29475 1434 aa28.27■■■□□ 2.12
SUSD3-205ENST00000617293 PKD2Q13563 968 aa28.27■■■□□ 2.12
SUSD3-205ENST00000617293 E9PCH4 1651 aa28.26■■■□□ 2.12
SUSD3-205ENST00000617293 IDI1Q13907 227 aa28.26■■■□□ 2.11
SUSD3-205ENST00000617293 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
SUSD3-205ENST00000617293 SYNMO15061 1565 aa28.24■■■□□ 2.11
SUSD3-205ENST00000617293 PTPRTO14522 1441 aa28.22■■■□□ 2.11
SUSD3-205ENST00000617293 ANKLE2Q86XL3 938 aa28.22■■■□□ 2.11
SUSD3-205ENST00000617293 UBR1Q8IWV7 1749 aa28.22■■■□□ 2.11
SUSD3-205ENST00000617293 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
SUSD3-205ENST00000617293 PIK3C2BO00750 1634 aa28.21■■■□□ 2.11
SUSD3-205ENST00000617293 SETD5Q9C0A6 1442 aa28.16■■■□□ 2.1
SUSD3-205ENST00000617293 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
SUSD3-205ENST00000617293 SLC4A1APQ9BWU0 796 aaKnown RBP28.15■■■□□ 2.1
SUSD3-205ENST00000617293 CHGAP10645 457 aaKnown RBP28.11■■■□□ 2.09
SUSD3-205ENST00000617293 TXNDC2Q86VQ3 553 aa28.11■■■□□ 2.09
SUSD3-205ENST00000617293 KDM5AP29375 1690 aaKnown RBP28.1■■■□□ 2.09
SUSD3-205ENST00000617293 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
SUSD3-205ENST00000617293 EID1Q9Y6B2 187 aa28.09■■■□□ 2.09
SUSD3-205ENST00000617293 ADGRB3O60242 1522 aa28.08■■■□□ 2.09
SUSD3-205ENST00000617293 LTKP29376 864 aa28.08■■■□□ 2.09
SUSD3-205ENST00000617293 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
SUSD3-205ENST00000617293 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
SUSD3-205ENST00000617293 ARHGAP23Q9P227 1491 aa28.08■■■□□ 2.09
SUSD3-205ENST00000617293 SLIT1O75093 1534 aa28.08■■■□□ 2.08
SUSD3-205ENST00000617293 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
SUSD3-205ENST00000617293 NPHP4O75161 1426 aaPredicted RBP28.06■■■□□ 2.08
SUSD3-205ENST00000617293 SCAF11Q99590 1463 aaKnown RBP28.05■■■□□ 2.08
SUSD3-205ENST00000617293 ACIN1Q9UKV3 1341 aaKnown RBP28.05■■■□□ 2.08
SUSD3-205ENST00000617293 MYO5BQ9ULV0 1848 aa28.04■■■□□ 2.08
SUSD3-205ENST00000617293 MED14O60244 1454 aa28.04■■■□□ 2.08
SUSD3-205ENST00000617293 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
SUSD3-205ENST00000617293 TMEM131LA2VDJ0 1609 aa28.03■■■□□ 2.08
SUSD3-205ENST00000617293 FOXD1Q16676 465 aa28.02■■■□□ 2.08
SUSD3-205ENST00000617293 ZNF335Q9H4Z2 1342 aaPredicted RBP28.01■■■□□ 2.07
SUSD3-205ENST00000617293 IQGAP1P46940 1657 aa28■■■□□ 2.07
SUSD3-205ENST00000617293 CERKQ8TCT0 537 aa28■■■□□ 2.07
SUSD3-205ENST00000617293 HDGFP51858 240 aaKnown RBP27.97■■■□□ 2.07
SUSD3-205ENST00000617293 TRPM2O94759 1503 aa27.97■■■□□ 2.07
SUSD3-205ENST00000617293 LTBP4Q8N2S1 1624 aa27.95■■■□□ 2.06
SUSD3-205ENST00000617293 RIMS2Q9UQ26 1411 aa27.94■■■□□ 2.06
SUSD3-205ENST00000617293 CLTCL1P53675 1640 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms