RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 MCM4P33991 863 aa19.82■□□□□ 0.76
SYNRG-223ENST00000616179 SEC24BO95487 1268 aa19.82■□□□□ 0.76
SYNRG-223ENST00000616179 TMF1P82094 1093 aa19.81■□□□□ 0.76
SYNRG-223ENST00000616179 CHMP5Q9NZZ3 219 aa19.81■□□□□ 0.76
SYNRG-223ENST00000616179 GRPEL1Q9HAV7 217 aa19.81■□□□□ 0.76
SYNRG-223ENST00000616179 FBLN2P98095 1184 aa19.8■□□□□ 0.76
SYNRG-223ENST00000616179 KIAA1211Q6ZU35 1233 aa19.8■□□□□ 0.76
SYNRG-223ENST00000616179 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
SYNRG-223ENST00000616179 R3HCC1Q9Y3T6 440 aaKnown RBP19.8■□□□□ 0.76
SYNRG-223ENST00000616179 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
SYNRG-223ENST00000616179 NUP155O75694 1391 aa19.79■□□□□ 0.76
SYNRG-223ENST00000616179 GBP4Q96PP9 640 aa19.79■□□□□ 0.76
SYNRG-223ENST00000616179 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
SYNRG-223ENST00000616179 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
SYNRG-223ENST00000616179 CLCN1P35523 988 aa19.77■□□□□ 0.76
SYNRG-223ENST00000616179 CUX1P39880 1505 aa19.77■□□□□ 0.76
SYNRG-223ENST00000616179 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
SYNRG-223ENST00000616179 CENPJQ9HC77 1338 aaPredicted RBP19.77■□□□□ 0.76
SYNRG-223ENST00000616179 DHX29Q7Z478 1369 aaKnown RBP19.77■□□□□ 0.75
SYNRG-223ENST00000616179 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
SYNRG-223ENST00000616179 TBC1D2Q9BYX2 928 aa19.76■□□□□ 0.75
SYNRG-223ENST00000616179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
SYNRG-223ENST00000616179 IGHDP01880 384 aa19.75■□□□□ 0.75
SYNRG-223ENST00000616179 RWDD1Q9H446 243 aaPredicted RBP19.74■□□□□ 0.75
SYNRG-223ENST00000616179 PTPN23Q9H3S7 1636 aa19.74■□□□□ 0.75
SYNRG-223ENST00000616179 C22orf23Q9BZE7 217 aa19.73■□□□□ 0.75
SYNRG-223ENST00000616179 DDX49Q9Y6V7 483 aaKnown RBP19.73■□□□□ 0.75
SYNRG-223ENST00000616179 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
SYNRG-223ENST00000616179 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
SYNRG-223ENST00000616179 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
SYNRG-223ENST00000616179 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
SYNRG-223ENST00000616179 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
SYNRG-223ENST00000616179 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
SYNRG-223ENST00000616179 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
SYNRG-223ENST00000616179 TPM2P07951 284 aa19.69■□□□□ 0.74
SYNRG-223ENST00000616179 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
SYNRG-223ENST00000616179 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
SYNRG-223ENST00000616179 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SYNRG-223ENST00000616179 NASPP49321 788 aaPredicted RBP19.67■□□□□ 0.74
SYNRG-223ENST00000616179 FOXD4L5Q5VV16 416 aaPredicted RBP19.67■□□□□ 0.74
SYNRG-223ENST00000616179 FOXD4L4Q8WXT5 416 aaPredicted RBP19.67■□□□□ 0.74
SYNRG-223ENST00000616179 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
SYNRG-223ENST00000616179 ITPRIPQ8IWB1 547 aa19.66■□□□□ 0.74
SYNRG-223ENST00000616179 PDCL3Q9H2J4 239 aa19.64■□□□□ 0.74
SYNRG-223ENST00000616179 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.73
SYNRG-223ENST00000616179 E9PSI1 815 aa19.63■□□□□ 0.73
SYNRG-223ENST00000616179 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
SYNRG-223ENST00000616179 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
SYNRG-223ENST00000616179 ZHX1Q9UKY1 873 aaPredicted RBP19.63■□□□□ 0.73
SYNRG-223ENST00000616179 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
SYNRG-223ENST00000616179 MPNDQ8N594 471 aa19.62■□□□□ 0.73
SYNRG-223ENST00000616179 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.62■□□□□ 0.73
SYNRG-223ENST00000616179 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
SYNRG-223ENST00000616179 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
SYNRG-223ENST00000616179 PPP2R1AP30153 589 aa19.6■□□□□ 0.73
SYNRG-223ENST00000616179 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
SYNRG-223ENST00000616179 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
SYNRG-223ENST00000616179 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
SYNRG-223ENST00000616179 SLFN5Q08AF3 891 aa19.57■□□□□ 0.72
SYNRG-223ENST00000616179 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
SYNRG-223ENST00000616179 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
SYNRG-223ENST00000616179 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
SYNRG-223ENST00000616179 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
SYNRG-223ENST00000616179 SKOR2Q2VWA4 1001 aaPredicted RBP19.56■□□□□ 0.72
SYNRG-223ENST00000616179 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
SYNRG-223ENST00000616179 UQCRHLA0A096LP55 91 aa19.56■□□□□ 0.72
SYNRG-223ENST00000616179 UQCRHP07919 91 aa19.56■□□□□ 0.72
SYNRG-223ENST00000616179 RNF214Q8ND24 703 aa19.56■□□□□ 0.72
SYNRG-223ENST00000616179 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
SYNRG-223ENST00000616179 MCTP1Q6DN14 999 aa19.55■□□□□ 0.72
SYNRG-223ENST00000616179 CAVIN1Q6NZI2 390 aaKnown RBP19.55■□□□□ 0.72
SYNRG-223ENST00000616179 LNPKQ9C0E8 428 aa19.55■□□□□ 0.72
SYNRG-223ENST00000616179 TBC1D32Q96NH3 1257 aa19.55■□□□□ 0.72
SYNRG-223ENST00000616179 APBB1O00213 710 aa19.53■□□□□ 0.72
SYNRG-223ENST00000616179 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
SYNRG-223ENST00000616179 ZSCAN30Q86W11 494 aa19.53■□□□□ 0.72
SYNRG-223ENST00000616179 ANKRD30AQ9BXX3 1397 aa19.52■□□□□ 0.72
SYNRG-223ENST00000616179 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.72
SYNRG-223ENST00000616179 CCDC173Q0VFZ6 552 aa19.52■□□□□ 0.72
SYNRG-223ENST00000616179 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
SYNRG-223ENST00000616179 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
SYNRG-223ENST00000616179 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
SYNRG-223ENST00000616179 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
SYNRG-223ENST00000616179 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
SYNRG-223ENST00000616179 PDE3AQ14432 1141 aa19.5■□□□□ 0.71
SYNRG-223ENST00000616179 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
SYNRG-223ENST00000616179 SPATA31E1Q6ZUB1 1445 aa19.5■□□□□ 0.71
SYNRG-223ENST00000616179 U2AF1L5P0DN76 240 aaPredicted RBP19.49■□□□□ 0.71
SYNRG-223ENST00000616179 U2AF1Q01081 240 aaKnown RBP eCLIP19.49■□□□□ 0.71
SYNRG-223ENST00000616179 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
SYNRG-223ENST00000616179 NOL8Q76FK4 1167 aaKnown RBP19.48■□□□□ 0.71
SYNRG-223ENST00000616179 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
SYNRG-223ENST00000616179 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
SYNRG-223ENST00000616179 PTMSP20962 102 aa19.47■□□□□ 0.71
SYNRG-223ENST00000616179 ERBB4Q15303 1308 aa19.47■□□□□ 0.71
SYNRG-223ENST00000616179 BCL11BQ9C0K0 894 aaPredicted RBP19.46■□□□□ 0.71
SYNRG-223ENST00000616179 KIAA1107Q9UPP5 1409 aa19.46■□□□□ 0.71
SYNRG-223ENST00000616179 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
SYNRG-223ENST00000616179 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
SYNRG-223ENST00000616179 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms