RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CCDC144AA2RUR9 1427 aa4.8□□□□□ -1.64
LIG4-205ENST00000614526 TEX14Q8IWB6 1497 aa4.8□□□□□ -1.64
LIG4-205ENST00000614526 GTF3C3Q9Y5Q9 886 aa4.8□□□□□ -1.64
LIG4-205ENST00000614526 ST20-MTHFSA0A0A6YYL1 179 aa4.8□□□□□ -1.64
LIG4-205ENST00000614526 SENP3-EIF4A1A0A087X0R7 540 aa4.79□□□□□ -1.64
LIG4-205ENST00000614526 MLECQ14165 292 aa4.79□□□□□ -1.64
LIG4-205ENST00000614526 NUTM2DQ5VT03 806 aaPredicted RBP4.79□□□□□ -1.64
LIG4-205ENST00000614526 POTEDQ86YR6 584 aa4.79□□□□□ -1.64
LIG4-205ENST00000614526 PLA2R1Q13018 1463 aa4.79□□□□□ -1.64
LIG4-205ENST00000614526 DUOX2Q9NRD8 1548 aa4.79□□□□□ -1.64
LIG4-205ENST00000614526 KIF7Q2M1P5 1343 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 USP47Q96K76 1375 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 DHX29Q7Z478 1369 aaKnown RBP4.78□□□□□ -1.64
LIG4-205ENST00000614526 WASHC2CQ9Y4E1 1318 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 ABCA9Q8IUA7 1624 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 ROCK2O75116 1388 aaKnown RBP4.78□□□□□ -1.64
LIG4-205ENST00000614526 KANK1Q14678 1352 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 ATP7AQ04656 1500 aa4.78□□□□□ -1.64
LIG4-205ENST00000614526 ERBINQ96RT1 1412 aa4.78□□□□□ -1.65
LIG4-205ENST00000614526 RIMBP3CA6NJZ7 1639 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 RIMBP3BA6NNM3 1639 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 RIMBP3Q9UFD9 1639 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 ZFYVE16Q7Z3T8 1539 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 CCDC184Q52MB2 194 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 PLPPR3Q6T4P5 718 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 RTEL1-TNFRSF6BF6WH68 1400 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 CCDC7Q96M83 1385 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 MAST1Q9Y2H9 1570 aa4.77□□□□□ -1.65
LIG4-205ENST00000614526 ZNF518AQ6AHZ1 1483 aa4.76□□□□□ -1.65
LIG4-205ENST00000614526 YEATS2Q9ULM3 1422 aa4.76□□□□□ -1.65
LIG4-205ENST00000614526 PLXNC1O60486 1568 aa4.76□□□□□ -1.65
LIG4-205ENST00000614526 KDM5DQ9BY66 1539 aa4.76□□□□□ -1.65
LIG4-205ENST00000614526 CFAP65Q6ZU64 1925 aaKnown RBP4.76□□□□□ -1.65
LIG4-205ENST00000614526 POGZQ7Z3K3 1410 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 FAM9BQ8IZU0 186 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 A2MP01023 1474 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 TRHP20396 242 aaPredicted RBP4.75□□□□□ -1.65
LIG4-205ENST00000614526 CFAP70Q5T0N1 1121 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 UGGT1Q9NYU2 1555 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 SPATA31E1Q6ZUB1 1445 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 ARAP3Q8WWN8 1544 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 TSPOAP1O95153 1857 aa4.75□□□□□ -1.65
LIG4-205ENST00000614526 FBXO31Q5XUX0 539 aaPredicted RBP4.74□□□□□ -1.65
LIG4-205ENST00000614526 UNC13BO14795 1591 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 ADGRF5Q8IZF2 1346 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 ATP10AO60312 1499 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 PRKRIP1Q9H875 184 aaPredicted RBP4.74□□□□□ -1.65
LIG4-205ENST00000614526 MRS2Q9HD23 443 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 PRAG1Q86YV5 1406 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 ARID4BQ4LE39 1312 aaPredicted RBP4.74□□□□□ -1.65
LIG4-205ENST00000614526 KIDINS220Q9ULH0 1771 aa4.74□□□□□ -1.65
LIG4-205ENST00000614526 HNRNPUQ00839 825 aaKnown RBP eCLIP4.73□□□□□ -1.65
LIG4-205ENST00000614526 TMEM132EQ6IEE7 984 aa4.73□□□□□ -1.65
LIG4-205ENST00000614526 IQGAP3Q86VI3 1631 aa4.73□□□□□ -1.65
LIG4-205ENST00000614526 INO80Q9ULG1 1556 aaPredicted RBP4.73□□□□□ -1.65
LIG4-205ENST00000614526 CNTLNQ9NXG0 1405 aa4.73□□□□□ -1.65
LIG4-205ENST00000614526 UHRF1BP1Q6BDS2 1440 aa4.73□□□□□ -1.65
LIG4-205ENST00000614526 CCER2I3L3R5 266 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 SAFB2Q14151 953 aaKnown RBP eCLIP4.72□□□□□ -1.65
LIG4-205ENST00000614526 IDI1Q13907 227 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 CC2D1BQ5T0F9 858 aaKnown RBP4.72□□□□□ -1.65
LIG4-205ENST00000614526 STAG3Q9UJ98 1225 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 TRAK1Q9UPV9 953 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 MAGI2Q86UL8 1455 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 RALGAPBQ86X10 1494 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 E9PCH4 1651 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 NEO1Q92859 1461 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 MLH3Q9UHC1 1453 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 NPATQ14207 1427 aa4.72□□□□□ -1.65
LIG4-205ENST00000614526 PRDM15P57071 1507 aaPredicted RBP4.72□□□□□ -1.65
LIG4-205ENST00000614526 BCORL1Q5H9F3 1711 aa4.71□□□□□ -1.65
LIG4-205ENST00000614526 TESK2Q96S53 571 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 STK26Q9P289 416 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 DISP3Q9P2K9 1392 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 COL17A1Q9UMD9 1497 aaPredicted RBP4.71□□□□□ -1.66
LIG4-205ENST00000614526 FRMPD1Q5SYB0 1578 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 ESF1Q9H501 851 aaKnown RBP4.71□□□□□ -1.66
LIG4-205ENST00000614526 PANK3Q9H999 370 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 PTPRTO14522 1441 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 HECW2Q9P2P5 1572 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 ABCA6Q8N139 1617 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 TMF1P82094 1093 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 BCANQ96GW7 911 aa4.71□□□□□ -1.66
LIG4-205ENST00000614526 SALL2Q9Y467 1007 aaPredicted RBP4.71□□□□□ -1.66
LIG4-205ENST00000614526 CLTCL1P53675 1640 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 NOS1P29475 1434 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 KDM5CP41229 1560 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 MROH1Q8NDA8 1641 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 DIP2BQ9P265 1576 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 TMC1Q8TDI8 760 aa4.7□□□□□ -1.66
LIG4-205ENST00000614526 CEP152O94986 1710 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 CEBPAP49715 358 aaPredicted RBP4.69□□□□□ -1.66
LIG4-205ENST00000614526 TRPM2O94759 1503 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 PPRC1Q5VV67 1664 aaKnown RBP4.69□□□□□ -1.66
LIG4-205ENST00000614526 TET3O43151 1660 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 MAP3K4Q9Y6R4 1608 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 IRX6P78412 446 aaPredicted RBP4.69□□□□□ -1.66
LIG4-205ENST00000614526 CFAP74Q9C0B2 1584 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 DIP2CQ9Y2E4 1556 aa4.69□□□□□ -1.66
LIG4-205ENST00000614526 EFCAB6Q5THR3 1501 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms