RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 KLHL34Q8N239 644 aa17.08■□□□□ 0.33
SRRT-215ENST00000614484 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.33
SRRT-215ENST00000614484 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
SRRT-215ENST00000614484 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
SRRT-215ENST00000614484 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
SRRT-215ENST00000614484 CFAP74Q9C0B2 1584 aa17.07■□□□□ 0.32
SRRT-215ENST00000614484 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
SRRT-215ENST00000614484 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
SRRT-215ENST00000614484 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
SRRT-215ENST00000614484 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
SRRT-215ENST00000614484 RICTORQ6R327 1708 aa17.04■□□□□ 0.32
SRRT-215ENST00000614484 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
SRRT-215ENST00000614484 PKD2Q13563 968 aa17.04■□□□□ 0.32
SRRT-215ENST00000614484 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
SRRT-215ENST00000614484 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
SRRT-215ENST00000614484 A2MP01023 1474 aa17.02■□□□□ 0.32
SRRT-215ENST00000614484 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
SRRT-215ENST00000614484 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.31
SRRT-215ENST00000614484 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
SRRT-215ENST00000614484 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
SRRT-215ENST00000614484 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
SRRT-215ENST00000614484 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
SRRT-215ENST00000614484 KDM5CP41229 1560 aa17■□□□□ 0.31
SRRT-215ENST00000614484 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
SRRT-215ENST00000614484 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
SRRT-215ENST00000614484 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
SRRT-215ENST00000614484 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
SRRT-215ENST00000614484 MIER1Q8N108 512 aa16.98■□□□□ 0.31
SRRT-215ENST00000614484 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
SRRT-215ENST00000614484 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
SRRT-215ENST00000614484 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
SRRT-215ENST00000614484 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
SRRT-215ENST00000614484 ATP10AO60312 1499 aa16.95■□□□□ 0.3
SRRT-215ENST00000614484 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
SRRT-215ENST00000614484 NEFLP07196 543 aa16.94■□□□□ 0.3
SRRT-215ENST00000614484 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
SRRT-215ENST00000614484 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
SRRT-215ENST00000614484 GCC2Q8IWJ2 1684 aa16.93■□□□□ 0.3
SRRT-215ENST00000614484 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
SRRT-215ENST00000614484 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
SRRT-215ENST00000614484 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
SRRT-215ENST00000614484 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
SRRT-215ENST00000614484 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
SRRT-215ENST00000614484 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
SRRT-215ENST00000614484 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
SRRT-215ENST00000614484 PZPP20742 1482 aa16.89■□□□□ 0.29
SRRT-215ENST00000614484 KANK1Q14678 1352 aa16.88■□□□□ 0.29
SRRT-215ENST00000614484 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
SRRT-215ENST00000614484 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
SRRT-215ENST00000614484 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
SRRT-215ENST00000614484 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
SRRT-215ENST00000614484 PDE4CQ08493 712 aa16.86■□□□□ 0.29
SRRT-215ENST00000614484 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
SRRT-215ENST00000614484 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
SRRT-215ENST00000614484 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
SRRT-215ENST00000614484 SUPT16HQ9Y5B9 1047 aaKnown RBP16.83■□□□□ 0.28
SRRT-215ENST00000614484 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
SRRT-215ENST00000614484 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
SRRT-215ENST00000614484 TSHZ2Q9NRE2 1034 aa16.82■□□□□ 0.28
SRRT-215ENST00000614484 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
SRRT-215ENST00000614484 MROH1Q8NDA8 1641 aa16.79■□□□□ 0.28
SRRT-215ENST00000614484 CEP152O94986 1710 aa16.79■□□□□ 0.28
SRRT-215ENST00000614484 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
SRRT-215ENST00000614484 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
SRRT-215ENST00000614484 NPATQ14207 1427 aa16.77■□□□□ 0.27
SRRT-215ENST00000614484 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.27
SRRT-215ENST00000614484 ANKRD30BQ9BXX2 1392 aa16.75■□□□□ 0.27
SRRT-215ENST00000614484 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
SRRT-215ENST00000614484 ABCC3O15438 1527 aa16.74■□□□□ 0.27
SRRT-215ENST00000614484 IDI1Q13907 227 aa16.74■□□□□ 0.27
SRRT-215ENST00000614484 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
SRRT-215ENST00000614484 UNC13BO14795 1591 aa16.74■□□□□ 0.27
SRRT-215ENST00000614484 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
SRRT-215ENST00000614484 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
SRRT-215ENST00000614484 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
SRRT-215ENST00000614484 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
SRRT-215ENST00000614484 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
SRRT-215ENST00000614484 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
SRRT-215ENST00000614484 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
SRRT-215ENST00000614484 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.27
SRRT-215ENST00000614484 E9PCH4 1651 aa16.7■□□□□ 0.26
SRRT-215ENST00000614484 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
SRRT-215ENST00000614484 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SRRT-215ENST00000614484 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
SRRT-215ENST00000614484 KDM5DQ9BY66 1539 aa16.68■□□□□ 0.26
SRRT-215ENST00000614484 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
SRRT-215ENST00000614484 AGLP35573 1532 aa16.67■□□□□ 0.26
SRRT-215ENST00000614484 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
SRRT-215ENST00000614484 BCANQ96GW7 911 aa16.66■□□□□ 0.26
SRRT-215ENST00000614484 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
SRRT-215ENST00000614484 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
SRRT-215ENST00000614484 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
SRRT-215ENST00000614484 FGD1P98174 961 aa16.64■□□□□ 0.25
SRRT-215ENST00000614484 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
SRRT-215ENST00000614484 HSPA2P54652 639 aa16.63■□□□□ 0.25
SRRT-215ENST00000614484 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
SRRT-215ENST00000614484 TET3O43151 1660 aa16.62■□□□□ 0.25
SRRT-215ENST00000614484 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
SRRT-215ENST00000614484 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
SRRT-215ENST00000614484 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms