RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
CDH1-213ENST00000612417 L3MBTL2Q969R5 705 aa20.49■□□□□ 0.87
CDH1-213ENST00000612417 UNC13BO14795 1591 aa20.48■□□□□ 0.87
CDH1-213ENST00000612417 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
CDH1-213ENST00000612417 INO80Q9ULG1 1556 aaPredicted RBP20.48■□□□□ 0.87
CDH1-213ENST00000612417 ZNF518AQ6AHZ1 1483 aa20.48■□□□□ 0.87
CDH1-213ENST00000612417 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
CDH1-213ENST00000612417 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
CDH1-213ENST00000612417 NEO1Q92859 1461 aa20.44■□□□□ 0.86
CDH1-213ENST00000612417 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
CDH1-213ENST00000612417 GLI2P10070 1586 aa20.44■□□□□ 0.86
CDH1-213ENST00000612417 POGZQ7Z3K3 1410 aa20.43■□□□□ 0.86
CDH1-213ENST00000612417 KIDINS220Q9ULH0 1771 aa20.42■□□□□ 0.86
CDH1-213ENST00000612417 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
CDH1-213ENST00000612417 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
CDH1-213ENST00000612417 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
CDH1-213ENST00000612417 TSPOAP1O95153 1857 aa20.39■□□□□ 0.86
CDH1-213ENST00000612417 RAPGEF3O95398 923 aa20.39■□□□□ 0.86
CDH1-213ENST00000612417 KIF3BO15066 747 aa20.39■□□□□ 0.85
CDH1-213ENST00000612417 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
CDH1-213ENST00000612417 CCDC7Q96M83 1385 aa20.39■□□□□ 0.85
CDH1-213ENST00000612417 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
CDH1-213ENST00000612417 KDM5CP41229 1560 aa20.37■□□□□ 0.85
CDH1-213ENST00000612417 NBPF8Q3BBV2 869 aa20.37■□□□□ 0.85
CDH1-213ENST00000612417 FKBP8Q14318 412 aa20.36■□□□□ 0.85
CDH1-213ENST00000612417 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
CDH1-213ENST00000612417 MLH3Q9UHC1 1453 aa20.35■□□□□ 0.85
CDH1-213ENST00000612417 KANK1Q14678 1352 aa20.34■□□□□ 0.85
CDH1-213ENST00000612417 NEFLP07196 543 aa20.33■□□□□ 0.85
CDH1-213ENST00000612417 A2MP01023 1474 aa20.33■□□□□ 0.84
CDH1-213ENST00000612417 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.84
CDH1-213ENST00000612417 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
CDH1-213ENST00000612417 TSHZ2Q9NRE2 1034 aa20.32■□□□□ 0.84
CDH1-213ENST00000612417 C11orf95C9JLR9 678 aaPredicted RBP20.31■□□□□ 0.84
CDH1-213ENST00000612417 CCDC144AA2RUR9 1427 aa20.31■□□□□ 0.84
CDH1-213ENST00000612417 RICTORQ6R327 1708 aa20.3■□□□□ 0.84
CDH1-213ENST00000612417 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
CDH1-213ENST00000612417 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
CDH1-213ENST00000612417 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
CDH1-213ENST00000612417 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
CDH1-213ENST00000612417 KIF13AQ9H1H9 1805 aa20.26■□□□□ 0.83
CDH1-213ENST00000612417 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
CDH1-213ENST00000612417 E9PCH4 1651 aa20.26■□□□□ 0.83
CDH1-213ENST00000612417 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
CDH1-213ENST00000612417 HNRNPUQ00839 825 aaKnown RBP eCLIP20.25■□□□□ 0.83
CDH1-213ENST00000612417 TET3O43151 1660 aa20.25■□□□□ 0.83
CDH1-213ENST00000612417 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
CDH1-213ENST00000612417 UHRF1BP1Q6BDS2 1440 aa20.24■□□□□ 0.83
CDH1-213ENST00000612417 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
CDH1-213ENST00000612417 BCANQ96GW7 911 aa20.24■□□□□ 0.83
CDH1-213ENST00000612417 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 GGT6Q6P531 493 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 FRMPD1Q5SYB0 1578 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 VWDEQ8N2E2 1590 aa20.23■□□□□ 0.83
CDH1-213ENST00000612417 BCORL1Q5H9F3 1711 aa20.21■□□□□ 0.83
CDH1-213ENST00000612417 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
CDH1-213ENST00000612417 ATP10AO60312 1499 aa20.21■□□□□ 0.83
CDH1-213ENST00000612417 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
CDH1-213ENST00000612417 RALGAPBQ86X10 1494 aa20.2■□□□□ 0.82
CDH1-213ENST00000612417 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
CDH1-213ENST00000612417 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
CDH1-213ENST00000612417 USP47Q96K76 1375 aa20.19■□□□□ 0.82
CDH1-213ENST00000612417 ARID4BQ4LE39 1312 aaPredicted RBP20.19■□□□□ 0.82
CDH1-213ENST00000612417 CEP152O94986 1710 aa20.18■□□□□ 0.82
CDH1-213ENST00000612417 CCDC184Q52MB2 194 aa20.17■□□□□ 0.82
CDH1-213ENST00000612417 WASHC2CQ9Y4E1 1318 aa20.15■□□□□ 0.82
CDH1-213ENST00000612417 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
CDH1-213ENST00000612417 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
CDH1-213ENST00000612417 TRPM2O94759 1503 aa20.14■□□□□ 0.82
CDH1-213ENST00000612417 PTPRTO14522 1441 aa20.14■□□□□ 0.81
CDH1-213ENST00000612417 EFCAB6Q5THR3 1501 aa20.13■□□□□ 0.81
CDH1-213ENST00000612417 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
CDH1-213ENST00000612417 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
CDH1-213ENST00000612417 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
CDH1-213ENST00000612417 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
CDH1-213ENST00000612417 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
CDH1-213ENST00000612417 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
CDH1-213ENST00000612417 CARD11Q9BXL7 1154 aa20.08■□□□□ 0.81
CDH1-213ENST00000612417 ABCC3O15438 1527 aa20.08■□□□□ 0.8
CDH1-213ENST00000612417 PRKCSHP14314 528 aaPredicted RBP20.06■□□□□ 0.8
CDH1-213ENST00000612417 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
CDH1-213ENST00000612417 COL17A1Q9UMD9 1497 aaPredicted RBP20.06■□□□□ 0.8
CDH1-213ENST00000612417 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
CDH1-213ENST00000612417 NPATQ14207 1427 aa20.04■□□□□ 0.8
CDH1-213ENST00000612417 CAMSAP1Q5T5Y3 1602 aa20.04■□□□□ 0.8
CDH1-213ENST00000612417 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
CDH1-213ENST00000612417 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
CDH1-213ENST00000612417 KIF1BO60333 1816 aa20.03■□□□□ 0.8
CDH1-213ENST00000612417 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
CDH1-213ENST00000612417 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.79
CDH1-213ENST00000612417 ERICH6Q7L0X2 663 aa20.01■□□□□ 0.79
CDH1-213ENST00000612417 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
CDH1-213ENST00000612417 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
CDH1-213ENST00000612417 LAMC1P11047 1609 aa19.98■□□□□ 0.79
CDH1-213ENST00000612417 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
CDH1-213ENST00000612417 REREQ9P2R6 1566 aa19.98■□□□□ 0.79
CDH1-213ENST00000612417 MLECQ14165 292 aa19.97■□□□□ 0.79
CDH1-213ENST00000612417 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms