RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-222ENST00000612341 KDM5CP41229 1560 aa17.46■□□□□ 0.39
SMTN-222ENST00000612341 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
SMTN-222ENST00000612341 FAM135AQ9P2D6 1515 aa17.46■□□□□ 0.39
SMTN-222ENST00000612341 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
SMTN-222ENST00000612341 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
SMTN-222ENST00000612341 PNISRQ8TF01 805 aaKnown RBP17.44■□□□□ 0.38
SMTN-222ENST00000612341 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
SMTN-222ENST00000612341 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
SMTN-222ENST00000612341 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
SMTN-222ENST00000612341 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
SMTN-222ENST00000612341 CHD1O14646 1710 aa17.42■□□□□ 0.38
SMTN-222ENST00000612341 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
SMTN-222ENST00000612341 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
SMTN-222ENST00000612341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMTN-222ENST00000612341 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
SMTN-222ENST00000612341 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
SMTN-222ENST00000612341 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
SMTN-222ENST00000612341 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.37
SMTN-222ENST00000612341 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
SMTN-222ENST00000612341 SLC24A1O60721 1099 aa17.39■□□□□ 0.37
SMTN-222ENST00000612341 KDM5DQ9BY66 1539 aa17.39■□□□□ 0.37
SMTN-222ENST00000612341 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
SMTN-222ENST00000612341 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
SMTN-222ENST00000612341 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
SMTN-222ENST00000612341 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SMTN-222ENST00000612341 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
SMTN-222ENST00000612341 RALBP1Q15311 655 aa17.34■□□□□ 0.37
SMTN-222ENST00000612341 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
SMTN-222ENST00000612341 PANK3Q9H999 370 aa17.33■□□□□ 0.37
SMTN-222ENST00000612341 A2MP01023 1474 aa17.33■□□□□ 0.37
SMTN-222ENST00000612341 SPAG9O60271 1321 aaKnown RBP17.33■□□□□ 0.36
SMTN-222ENST00000612341 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.36
SMTN-222ENST00000612341 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
SMTN-222ENST00000612341 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
SMTN-222ENST00000612341 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
SMTN-222ENST00000612341 MSH5O43196 834 aa17.31■□□□□ 0.36
SMTN-222ENST00000612341 TESK2Q96S53 571 aa17.31■□□□□ 0.36
SMTN-222ENST00000612341 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
SMTN-222ENST00000612341 PLCH2O75038 1416 aa17.3■□□□□ 0.36
SMTN-222ENST00000612341 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
SMTN-222ENST00000612341 TMF1P82094 1093 aa17.29■□□□□ 0.36
SMTN-222ENST00000612341 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
SMTN-222ENST00000612341 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
SMTN-222ENST00000612341 UBE2Q2Q8WVN8 375 aa17.27■□□□□ 0.36
SMTN-222ENST00000612341 KIF3BO15066 747 aa17.26■□□□□ 0.35
SMTN-222ENST00000612341 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
SMTN-222ENST00000612341 CDCA7LQ96GN5 454 aa17.25■□□□□ 0.35
SMTN-222ENST00000612341 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
SMTN-222ENST00000612341 DUOX2Q9NRD8 1548 aa17.25■□□□□ 0.35
SMTN-222ENST00000612341 ERBINQ96RT1 1412 aa17.24■□□□□ 0.35
SMTN-222ENST00000612341 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
SMTN-222ENST00000612341 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
SMTN-222ENST00000612341 UNC13BO14795 1591 aa17.22■□□□□ 0.35
SMTN-222ENST00000612341 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
SMTN-222ENST00000612341 GPRASP1Q5JY77 1395 aa17.22■□□□□ 0.35
SMTN-222ENST00000612341 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
SMTN-222ENST00000612341 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
SMTN-222ENST00000612341 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
SMTN-222ENST00000612341 RCAN3Q9UKA8 241 aa17.2■□□□□ 0.34
SMTN-222ENST00000612341 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
SMTN-222ENST00000612341 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
SMTN-222ENST00000612341 COL17A1Q9UMD9 1497 aaPredicted RBP17.19■□□□□ 0.34
SMTN-222ENST00000612341 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
SMTN-222ENST00000612341 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
SMTN-222ENST00000612341 PLXNC1O60486 1568 aa17.18■□□□□ 0.34
SMTN-222ENST00000612341 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
SMTN-222ENST00000612341 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
SMTN-222ENST00000612341 PLIN1O60240 522 aa17.18■□□□□ 0.34
SMTN-222ENST00000612341 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
SMTN-222ENST00000612341 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
SMTN-222ENST00000612341 ABCC1P33527 1531 aa17.16■□□□□ 0.34
SMTN-222ENST00000612341 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
SMTN-222ENST00000612341 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
SMTN-222ENST00000612341 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.34
SMTN-222ENST00000612341 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
SMTN-222ENST00000612341 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
SMTN-222ENST00000612341 KANK1Q14678 1352 aa17.12■□□□□ 0.33
SMTN-222ENST00000612341 FANCAO15360 1455 aa17.12■□□□□ 0.33
SMTN-222ENST00000612341 E9PCH4 1651 aa17.12■□□□□ 0.33
SMTN-222ENST00000612341 ATP10AO60312 1499 aa17.12■□□□□ 0.33
SMTN-222ENST00000612341 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
SMTN-222ENST00000612341 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMTN-222ENST00000612341 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
SMTN-222ENST00000612341 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
SMTN-222ENST00000612341 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
SMTN-222ENST00000612341 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
SMTN-222ENST00000612341 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
SMTN-222ENST00000612341 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
SMTN-222ENST00000612341 GGT6Q6P531 493 aa17.09■□□□□ 0.33
SMTN-222ENST00000612341 WDR7Q9Y4E6 1490 aa17.08■□□□□ 0.33
SMTN-222ENST00000612341 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
SMTN-222ENST00000612341 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
SMTN-222ENST00000612341 EIF2AK4Q9P2K8 1649 aaKnown RBP17.08■□□□□ 0.32
SMTN-222ENST00000612341 ADGRL1O94910 1474 aa17.08■□□□□ 0.32
SMTN-222ENST00000612341 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
SMTN-222ENST00000612341 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
SMTN-222ENST00000612341 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
SMTN-222ENST00000612341 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
SMTN-222ENST00000612341 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMTN-222ENST00000612341 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms