RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 GZF1Q9H116 711 aaPredicted RBP18.41■□□□□ 0.54
HOXA3-207ENST00000612286 RRP7AQ9Y3A4 280 aaKnown RBP18.41■□□□□ 0.54
HOXA3-207ENST00000612286 HECW1Q76N89 1606 aa18.4■□□□□ 0.54
HOXA3-207ENST00000612286 PZPP20742 1482 aa18.4■□□□□ 0.54
HOXA3-207ENST00000612286 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
HOXA3-207ENST00000612286 KNSTRNQ9Y448 316 aa18.4■□□□□ 0.54
HOXA3-207ENST00000612286 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.54
HOXA3-207ENST00000612286 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.54
HOXA3-207ENST00000612286 CLUAP1Q96AJ1 413 aa18.39■□□□□ 0.53
HOXA3-207ENST00000612286 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
HOXA3-207ENST00000612286 APAF1O14727 1248 aa18.38■□□□□ 0.53
HOXA3-207ENST00000612286 CUL7Q14999 1698 aa18.37■□□□□ 0.53
HOXA3-207ENST00000612286 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
HOXA3-207ENST00000612286 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
HOXA3-207ENST00000612286 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
HOXA3-207ENST00000612286 DISP3Q9P2K9 1392 aa18.35■□□□□ 0.53
HOXA3-207ENST00000612286 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
HOXA3-207ENST00000612286 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
HOXA3-207ENST00000612286 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
HOXA3-207ENST00000612286 MS4A1P11836 297 aa18.33■□□□□ 0.53
HOXA3-207ENST00000612286 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.53
HOXA3-207ENST00000612286 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
HOXA3-207ENST00000612286 POGKQ9P215 609 aa18.33■□□□□ 0.52
HOXA3-207ENST00000612286 GCC2Q8IWJ2 1684 aa18.32■□□□□ 0.52
HOXA3-207ENST00000612286 SEC24BO95487 1268 aa18.32■□□□□ 0.52
HOXA3-207ENST00000612286 TMF1P82094 1093 aa18.32■□□□□ 0.52
HOXA3-207ENST00000612286 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
HOXA3-207ENST00000612286 LRPPRCP42704 1394 aaKnown RBP18.31■□□□□ 0.52
HOXA3-207ENST00000612286 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
HOXA3-207ENST00000612286 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
HOXA3-207ENST00000612286 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
HOXA3-207ENST00000612286 PDE3BQ13370 1112 aa18.3■□□□□ 0.52
HOXA3-207ENST00000612286 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
HOXA3-207ENST00000612286 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
HOXA3-207ENST00000612286 ROCK1Q13464 1354 aa18.3■□□□□ 0.52
HOXA3-207ENST00000612286 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
HOXA3-207ENST00000612286 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
HOXA3-207ENST00000612286 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
HOXA3-207ENST00000612286 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
HOXA3-207ENST00000612286 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
HOXA3-207ENST00000612286 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
HOXA3-207ENST00000612286 PLEKHH1Q9ULM0 1364 aa18.28■□□□□ 0.52
HOXA3-207ENST00000612286 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
HOXA3-207ENST00000612286 IGHDP01880 384 aa18.27■□□□□ 0.52
HOXA3-207ENST00000612286 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
HOXA3-207ENST00000612286 PPP2R1AP30153 589 aa18.27■□□□□ 0.51
HOXA3-207ENST00000612286 DUSP27Q5VZP5 1158 aa18.26■□□□□ 0.51
HOXA3-207ENST00000612286 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
HOXA3-207ENST00000612286 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
HOXA3-207ENST00000612286 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
HOXA3-207ENST00000612286 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
HOXA3-207ENST00000612286 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
HOXA3-207ENST00000612286 C9orf84Q5VXU9 1444 aa18.22■□□□□ 0.51
HOXA3-207ENST00000612286 WDR62O43379 1518 aa18.22■□□□□ 0.51
HOXA3-207ENST00000612286 TESK2Q96S53 571 aa18.22■□□□□ 0.51
HOXA3-207ENST00000612286 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
HOXA3-207ENST00000612286 POLR1AO95602 1720 aaPredicted RBP18.21■□□□□ 0.51
HOXA3-207ENST00000612286 PARD3Q8TEW0 1356 aa18.2■□□□□ 0.5
HOXA3-207ENST00000612286 KDM5CP41229 1560 aa18.2■□□□□ 0.5
HOXA3-207ENST00000612286 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
HOXA3-207ENST00000612286 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
HOXA3-207ENST00000612286 NUTM2DQ5VT03 806 aaPredicted RBP18.18■□□□□ 0.5
HOXA3-207ENST00000612286 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
HOXA3-207ENST00000612286 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
HOXA3-207ENST00000612286 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
HOXA3-207ENST00000612286 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
HOXA3-207ENST00000612286 KIF14Q15058 1648 aa18.16■□□□□ 0.5
HOXA3-207ENST00000612286 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
HOXA3-207ENST00000612286 MFAP1P55081 439 aaKnown RBP18.14■□□□□ 0.5
HOXA3-207ENST00000612286 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
HOXA3-207ENST00000612286 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
HOXA3-207ENST00000612286 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
HOXA3-207ENST00000612286 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
HOXA3-207ENST00000612286 DISP1Q96F81 1524 aa18.11■□□□□ 0.49
HOXA3-207ENST00000612286 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
HOXA3-207ENST00000612286 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
HOXA3-207ENST00000612286 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
HOXA3-207ENST00000612286 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
HOXA3-207ENST00000612286 BECN1Q14457 450 aa18.08■□□□□ 0.48
HOXA3-207ENST00000612286 RLBP1P12271 317 aa18.07■□□□□ 0.48
HOXA3-207ENST00000612286 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
HOXA3-207ENST00000612286 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
HOXA3-207ENST00000612286 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
HOXA3-207ENST00000612286 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
HOXA3-207ENST00000612286 RRAGDQ9NQL2 400 aaPredicted RBP18.05■□□□□ 0.48
HOXA3-207ENST00000612286 PCDHB15Q9Y5E8 787 aa18.05■□□□□ 0.48
HOXA3-207ENST00000612286 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
HOXA3-207ENST00000612286 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
HOXA3-207ENST00000612286 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
HOXA3-207ENST00000612286 U2SURPO15042 1029 aaKnown RBP18.04■□□□□ 0.48
HOXA3-207ENST00000612286 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
HOXA3-207ENST00000612286 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
HOXA3-207ENST00000612286 UHRF1BP1Q6BDS2 1440 aa18.03■□□□□ 0.48
HOXA3-207ENST00000612286 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
HOXA3-207ENST00000612286 RAPGEF6Q8TEU7 1601 aa18.02■□□□□ 0.48
HOXA3-207ENST00000612286 TMEM132EQ6IEE7 984 aa18.02■□□□□ 0.47
HOXA3-207ENST00000612286 SLC12A5Q9H2X9 1139 aa18.01■□□□□ 0.47
HOXA3-207ENST00000612286 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
HOXA3-207ENST00000612286 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
HOXA3-207ENST00000612286 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms