RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
CLTCL1-207ENST00000611723 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
CLTCL1-207ENST00000611723 ATP10AO60312 1499 aa23.77■■□□□ 1.4
CLTCL1-207ENST00000611723 HSPA2P54652 639 aa23.76■■□□□ 1.39
CLTCL1-207ENST00000611723 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
CLTCL1-207ENST00000611723 ARHGEF40Q8TER5 1519 aa23.75■■□□□ 1.39
CLTCL1-207ENST00000611723 REREQ9P2R6 1566 aa23.73■■□□□ 1.39
CLTCL1-207ENST00000611723 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
CLTCL1-207ENST00000611723 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
CLTCL1-207ENST00000611723 KIF3BO15066 747 aa23.67■■□□□ 1.38
CLTCL1-207ENST00000611723 AGLP35573 1532 aa23.67■■□□□ 1.38
CLTCL1-207ENST00000611723 TRIM52Q96A61 297 aa23.64■■□□□ 1.37
CLTCL1-207ENST00000611723 UNC13BO14795 1591 aa23.61■■□□□ 1.37
CLTCL1-207ENST00000611723 MLECQ14165 292 aa23.61■■□□□ 1.37
CLTCL1-207ENST00000611723 NUP155O75694 1391 aa23.61■■□□□ 1.37
CLTCL1-207ENST00000611723 KDM5DQ9BY66 1539 aa23.6■■□□□ 1.37
CLTCL1-207ENST00000611723 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
CLTCL1-207ENST00000611723 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
CLTCL1-207ENST00000611723 DHX57Q6P158 1386 aaKnown RBP23.58■■□□□ 1.37
CLTCL1-207ENST00000611723 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
CLTCL1-207ENST00000611723 PPP6R1Q9UPN7 881 aa23.58■■□□□ 1.37
CLTCL1-207ENST00000611723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.57■■□□□ 1.36
CLTCL1-207ENST00000611723 CERKQ8TCT0 537 aa23.56■■□□□ 1.36
CLTCL1-207ENST00000611723 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
CLTCL1-207ENST00000611723 PZPP20742 1482 aa23.56■■□□□ 1.36
CLTCL1-207ENST00000611723 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
CLTCL1-207ENST00000611723 FER1L4A9Z1Z3 1794 aa23.55■■□□□ 1.36
CLTCL1-207ENST00000611723 KANK1Q14678 1352 aa23.55■■□□□ 1.36
CLTCL1-207ENST00000611723 GGT6Q6P531 493 aa23.55■■□□□ 1.36
CLTCL1-207ENST00000611723 PRDM15P57071 1507 aaPredicted RBP23.54■■□□□ 1.36
CLTCL1-207ENST00000611723 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
CLTCL1-207ENST00000611723 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
CLTCL1-207ENST00000611723 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
CLTCL1-207ENST00000611723 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
CLTCL1-207ENST00000611723 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
CLTCL1-207ENST00000611723 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
CLTCL1-207ENST00000611723 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
CLTCL1-207ENST00000611723 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
CLTCL1-207ENST00000611723 PKD2Q13563 968 aa23.46■■□□□ 1.35
CLTCL1-207ENST00000611723 ABCC3O15438 1527 aa23.43■■□□□ 1.34
CLTCL1-207ENST00000611723 TET3O43151 1660 aa23.41■■□□□ 1.34
CLTCL1-207ENST00000611723 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
CLTCL1-207ENST00000611723 ILDR2Q71H61 639 aa23.41■■□□□ 1.34
CLTCL1-207ENST00000611723 ZC3H13Q5T200 1668 aaKnown RBP23.4■■□□□ 1.34
CLTCL1-207ENST00000611723 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
CLTCL1-207ENST00000611723 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
CLTCL1-207ENST00000611723 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
CLTCL1-207ENST00000611723 FOXD1Q16676 465 aa23.38■■□□□ 1.33
CLTCL1-207ENST00000611723 CEP152O94986 1710 aa23.37■■□□□ 1.33
CLTCL1-207ENST00000611723 CNTLNQ9NXG0 1405 aa23.36■■□□□ 1.33
CLTCL1-207ENST00000611723 EFCAB6Q5THR3 1501 aa23.36■■□□□ 1.33
CLTCL1-207ENST00000611723 DISP3Q9P2K9 1392 aa23.36■■□□□ 1.33
CLTCL1-207ENST00000611723 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
CLTCL1-207ENST00000611723 ESF1Q9H501 851 aaKnown RBP23.35■■□□□ 1.33
CLTCL1-207ENST00000611723 E9PCH4 1651 aa23.34■■□□□ 1.33
CLTCL1-207ENST00000611723 NPATQ14207 1427 aa23.33■■□□□ 1.33
CLTCL1-207ENST00000611723 PTPRTO14522 1441 aa23.33■■□□□ 1.32
CLTCL1-207ENST00000611723 CAMSAP1Q5T5Y3 1602 aa23.32■■□□□ 1.32
CLTCL1-207ENST00000611723 ZMYM3Q14202 1370 aa23.31■■□□□ 1.32
CLTCL1-207ENST00000611723 PLA2R1Q13018 1463 aa23.3■■□□□ 1.32
CLTCL1-207ENST00000611723 CLTCQ00610 1675 aaKnown RBP23.3■■□□□ 1.32
CLTCL1-207ENST00000611723 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
CLTCL1-207ENST00000611723 MROH2AA6NES4 1674 aa23.27■■□□□ 1.32
CLTCL1-207ENST00000611723 NOS1P29475 1434 aa23.26■■□□□ 1.31
CLTCL1-207ENST00000611723 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
CLTCL1-207ENST00000611723 SETD1BQ9UPS6 1966 aaKnown RBP23.24■■□□□ 1.31
CLTCL1-207ENST00000611723 C3P01024 1663 aa23.24■■□□□ 1.31
CLTCL1-207ENST00000611723 TRPM2O94759 1503 aa23.23■■□□□ 1.31
CLTCL1-207ENST00000611723 SOCS7O14512 581 aa23.22■■□□□ 1.31
CLTCL1-207ENST00000611723 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
CLTCL1-207ENST00000611723 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
CLTCL1-207ENST00000611723 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
CLTCL1-207ENST00000611723 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
CLTCL1-207ENST00000611723 ERVK-7P63135 1459 aa23.2■■□□□ 1.3
CLTCL1-207ENST00000611723 SPATA31D1Q6ZQQ2 1576 aa23.19■■□□□ 1.3
CLTCL1-207ENST00000611723 CCDC144AA2RUR9 1427 aa23.19■■□□□ 1.3
CLTCL1-207ENST00000611723 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
CLTCL1-207ENST00000611723 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
CLTCL1-207ENST00000611723 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
CLTCL1-207ENST00000611723 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
CLTCL1-207ENST00000611723 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
CLTCL1-207ENST00000611723 SYNMO15061 1565 aa23.14■■□□□ 1.3
CLTCL1-207ENST00000611723 IDI1Q13907 227 aa23.12■■□□□ 1.29
CLTCL1-207ENST00000611723 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
CLTCL1-207ENST00000611723 TNRQ92752 1358 aa23.11■■□□□ 1.29
CLTCL1-207ENST00000611723 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
CLTCL1-207ENST00000611723 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
CLTCL1-207ENST00000611723 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
CLTCL1-207ENST00000611723 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.29
CLTCL1-207ENST00000611723 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
CLTCL1-207ENST00000611723 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
CLTCL1-207ENST00000611723 NLRP1Q9C000 1473 aa23.04■■□□□ 1.28
CLTCL1-207ENST00000611723 KIF1BO60333 1816 aa23.03■■□□□ 1.28
CLTCL1-207ENST00000611723 ADGRB3O60242 1522 aa23.01■■□□□ 1.27
CLTCL1-207ENST00000611723 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
CLTCL1-207ENST00000611723 RGL3Q3MIN7 710 aa23■■□□□ 1.27
CLTCL1-207ENST00000611723 STAC3Q96MF2 364 aa23■■□□□ 1.27
CLTCL1-207ENST00000611723 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
CLTCL1-207ENST00000611723 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
CLTCL1-207ENST00000611723 RPGRIP1LQ68CZ1 1315 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms