RNA–Protein interactions for RNA: ENST00000611216.4

KDM2B-219, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 3,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-219ENST00000611216 PTPRGP23470 1445 aa17.34■□□□□ 0.37
KDM2B-219ENST00000611216 KDM5CP41229 1560 aa17.33■□□□□ 0.37
KDM2B-219ENST00000611216 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
KDM2B-219ENST00000611216 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.36
KDM2B-219ENST00000611216 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
KDM2B-219ENST00000611216 RALBP1Q15311 655 aa17.31■□□□□ 0.36
KDM2B-219ENST00000611216 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
KDM2B-219ENST00000611216 DISP3Q9P2K9 1392 aa17.3■□□□□ 0.36
KDM2B-219ENST00000611216 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
KDM2B-219ENST00000611216 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
KDM2B-219ENST00000611216 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
KDM2B-219ENST00000611216 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
KDM2B-219ENST00000611216 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
KDM2B-219ENST00000611216 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
KDM2B-219ENST00000611216 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
KDM2B-219ENST00000611216 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.35
KDM2B-219ENST00000611216 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.35
KDM2B-219ENST00000611216 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
KDM2B-219ENST00000611216 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
KDM2B-219ENST00000611216 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
KDM2B-219ENST00000611216 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
KDM2B-219ENST00000611216 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
KDM2B-219ENST00000611216 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-219ENST00000611216 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 TESK2Q96S53 571 aa17.24■□□□□ 0.35
KDM2B-219ENST00000611216 NUP160Q12769 1436 aa17.23■□□□□ 0.35
KDM2B-219ENST00000611216 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
KDM2B-219ENST00000611216 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
KDM2B-219ENST00000611216 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
KDM2B-219ENST00000611216 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
KDM2B-219ENST00000611216 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.35
KDM2B-219ENST00000611216 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
KDM2B-219ENST00000611216 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
KDM2B-219ENST00000611216 TMF1P82094 1093 aa17.21■□□□□ 0.35
KDM2B-219ENST00000611216 CROCC2H7BZ55 1655 aa17.21■□□□□ 0.34
KDM2B-219ENST00000611216 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
KDM2B-219ENST00000611216 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-219ENST00000611216 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
KDM2B-219ENST00000611216 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
KDM2B-219ENST00000611216 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-219ENST00000611216 ABCA8O94911 1581 aa17.19■□□□□ 0.34
KDM2B-219ENST00000611216 PDE4AP27815 886 aa17.18■□□□□ 0.34
KDM2B-219ENST00000611216 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
KDM2B-219ENST00000611216 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
KDM2B-219ENST00000611216 A2MP01023 1474 aa17.17■□□□□ 0.34
KDM2B-219ENST00000611216 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.34
KDM2B-219ENST00000611216 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
KDM2B-219ENST00000611216 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
KDM2B-219ENST00000611216 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
KDM2B-219ENST00000611216 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
KDM2B-219ENST00000611216 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.33
KDM2B-219ENST00000611216 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
KDM2B-219ENST00000611216 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
KDM2B-219ENST00000611216 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
KDM2B-219ENST00000611216 KDM5DQ9BY66 1539 aa17.13■□□□□ 0.33
KDM2B-219ENST00000611216 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
KDM2B-219ENST00000611216 RGS3P49796 1198 aa17.12■□□□□ 0.33
KDM2B-219ENST00000611216 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
KDM2B-219ENST00000611216 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
KDM2B-219ENST00000611216 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
KDM2B-219ENST00000611216 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
KDM2B-219ENST00000611216 KIF3BO15066 747 aa17.09■□□□□ 0.33
KDM2B-219ENST00000611216 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-219ENST00000611216 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.33
KDM2B-219ENST00000611216 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.33
KDM2B-219ENST00000611216 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.33
KDM2B-219ENST00000611216 APAF1O14727 1248 aa17.08■□□□□ 0.32
KDM2B-219ENST00000611216 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
KDM2B-219ENST00000611216 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
KDM2B-219ENST00000611216 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
KDM2B-219ENST00000611216 TCERG1O14776 1098 aaKnown RBP17.07■□□□□ 0.32
KDM2B-219ENST00000611216 NEFMP07197 916 aa17.06■□□□□ 0.32
KDM2B-219ENST00000611216 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
KDM2B-219ENST00000611216 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
KDM2B-219ENST00000611216 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
KDM2B-219ENST00000611216 RTN4Q9NQC3 1192 aaKnown RBP17.06■□□□□ 0.32
KDM2B-219ENST00000611216 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
KDM2B-219ENST00000611216 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
KDM2B-219ENST00000611216 BCAR3O75815 825 aa17.05■□□□□ 0.32
KDM2B-219ENST00000611216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.32
KDM2B-219ENST00000611216 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
KDM2B-219ENST00000611216 MAGI2Q86UL8 1455 aa17.04■□□□□ 0.32
KDM2B-219ENST00000611216 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
KDM2B-219ENST00000611216 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
KDM2B-219ENST00000611216 GOLGA2Q08379 1002 aa17.02■□□□□ 0.31
KDM2B-219ENST00000611216 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.31
KDM2B-219ENST00000611216 ARHGEF5Q12774 1597 aa17.01■□□□□ 0.31
KDM2B-219ENST00000611216 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
KDM2B-219ENST00000611216 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
KDM2B-219ENST00000611216 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
KDM2B-219ENST00000611216 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
KDM2B-219ENST00000611216 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
KDM2B-219ENST00000611216 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
KDM2B-219ENST00000611216 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
KDM2B-219ENST00000611216 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
KDM2B-219ENST00000611216 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms