RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
RER1-209ENST00000605895 XRCC6P12956 609 aaKnown RBP eCLIP19.94■□□□□ 0.78
RER1-209ENST00000605895 TCOF1Q13428 1488 aaKnown RBP19.94■□□□□ 0.78
RER1-209ENST00000605895 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
RER1-209ENST00000605895 NUP155O75694 1391 aa19.94■□□□□ 0.78
RER1-209ENST00000605895 HSP90AA2PQ14568 343 aaPredicted RBP19.94■□□□□ 0.78
RER1-209ENST00000605895 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
RER1-209ENST00000605895 DUSP27Q5VZP5 1158 aa19.94■□□□□ 0.78
RER1-209ENST00000605895 PER1O15534 1290 aaPredicted RBP19.93■□□□□ 0.78
RER1-209ENST00000605895 PZPP20742 1482 aa19.93■□□□□ 0.78
RER1-209ENST00000605895 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
RER1-209ENST00000605895 USP19O94966 1318 aa19.92■□□□□ 0.78
RER1-209ENST00000605895 GLIPR1L2Q4G1C9 344 aa19.92■□□□□ 0.78
RER1-209ENST00000605895 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
RER1-209ENST00000605895 COG6Q9Y2V7 657 aa19.91■□□□□ 0.78
RER1-209ENST00000605895 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
RER1-209ENST00000605895 PANK1Q8TE04 598 aa19.9■□□□□ 0.78
RER1-209ENST00000605895 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
RER1-209ENST00000605895 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
RER1-209ENST00000605895 KDM5CP41229 1560 aa19.9■□□□□ 0.78
RER1-209ENST00000605895 NESP48681 1621 aa19.9■□□□□ 0.78
RER1-209ENST00000605895 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
RER1-209ENST00000605895 KIAA1107Q9UPP5 1409 aa19.89■□□□□ 0.78
RER1-209ENST00000605895 HSP90AA1P07900 732 aaKnown RBP19.89■□□□□ 0.77
RER1-209ENST00000605895 GOLGA2Q08379 1002 aa19.89■□□□□ 0.77
RER1-209ENST00000605895 GOLGA6L3A6NEY3 463 aa19.89■□□□□ 0.77
RER1-209ENST00000605895 PARD3Q8TEW0 1356 aa19.89■□□□□ 0.77
RER1-209ENST00000605895 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
RER1-209ENST00000605895 BECN1Q14457 450 aa19.88■□□□□ 0.77
RER1-209ENST00000605895 NEUROD2Q15784 382 aa19.88■□□□□ 0.77
RER1-209ENST00000605895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.771e-6■□□□□ 9.9
RER1-209ENST00000605895 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
RER1-209ENST00000605895 ARHGEF11O15085 1522 aa19.87■□□□□ 0.77
RER1-209ENST00000605895 L1TD1Q5T7N2 865 aaKnown RBP19.87■□□□□ 0.77
RER1-209ENST00000605895 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
RER1-209ENST00000605895 APAF1O14727 1248 aa19.85■□□□□ 0.77
RER1-209ENST00000605895 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
RER1-209ENST00000605895 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
RER1-209ENST00000605895 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
RER1-209ENST00000605895 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
RER1-209ENST00000605895 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.77
RER1-209ENST00000605895 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.76
RER1-209ENST00000605895 ROCK1Q13464 1354 aa19.82■□□□□ 0.76
RER1-209ENST00000605895 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
RER1-209ENST00000605895 TNNQ9UQP3 1299 aa19.82■□□□□ 0.76
RER1-209ENST00000605895 ARID3AQ99856 593 aa19.81■□□□□ 0.76
RER1-209ENST00000605895 SAMD9Q5K651 1589 aa19.79■□□□□ 0.76
RER1-209ENST00000605895 PPP2R1AP30153 589 aa19.78■□□□□ 0.76
RER1-209ENST00000605895 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
RER1-209ENST00000605895 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
RER1-209ENST00000605895 ANTXR1Q9H6X2 564 aa19.77■□□□□ 0.76
RER1-209ENST00000605895 RALGAPBQ86X10 1494 aa19.77■□□□□ 0.76
RER1-209ENST00000605895 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
RER1-209ENST00000605895 SLFN5Q08AF3 891 aa19.76■□□□□ 0.75
RER1-209ENST00000605895 RRP7AQ9Y3A4 280 aaKnown RBP19.76■□□□□ 0.75
RER1-209ENST00000605895 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
RER1-209ENST00000605895 MFAP1P55081 439 aaKnown RBP19.76■□□□□ 0.75
RER1-209ENST00000605895 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
RER1-209ENST00000605895 KIF14Q15058 1648 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 TRAK2O60296 914 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 MCM4P33991 863 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
RER1-209ENST00000605895 KIAA0586Q9BVV6 1533 aa19.74■□□□□ 0.75
RER1-209ENST00000605895 ANKRD50Q9ULJ7 1429 aa19.74■□□□□ 0.75
RER1-209ENST00000605895 CUL7Q14999 1698 aa19.74■□□□□ 0.75
RER1-209ENST00000605895 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
RER1-209ENST00000605895 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.753e-7■■■□□ 17.8
RER1-209ENST00000605895 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
RER1-209ENST00000605895 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
RER1-209ENST00000605895 TESK2Q96S53 571 aa19.73■□□□□ 0.75
RER1-209ENST00000605895 CLCN1P35523 988 aa19.72■□□□□ 0.75
RER1-209ENST00000605895 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
RER1-209ENST00000605895 TMF1P82094 1093 aa19.71■□□□□ 0.75
RER1-209ENST00000605895 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
RER1-209ENST00000605895 PCDHB15Q9Y5E8 787 aa19.7■□□□□ 0.74
RER1-209ENST00000605895 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
RER1-209ENST00000605895 ZMYM4Q5VZL5 1548 aa19.69■□□□□ 0.74
RER1-209ENST00000605895 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
RER1-209ENST00000605895 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
RER1-209ENST00000605895 RBM10P98175 930 aaKnown RBP19.68■□□□□ 0.74
RER1-209ENST00000605895 ESPNB1AK53 854 aa19.68■□□□□ 0.74
RER1-209ENST00000605895 TRIM44Q96DX7 344 aaPredicted RBP19.68■□□□□ 0.74
RER1-209ENST00000605895 UHRF1BP1Q6BDS2 1440 aa19.67■□□□□ 0.74
RER1-209ENST00000605895 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
RER1-209ENST00000605895 RRP9O43818 475 aaKnown RBP19.67■□□□□ 0.74
RER1-209ENST00000605895 CAMSAP2Q08AD1 1489 aa19.66■□□□□ 0.74
RER1-209ENST00000605895 RLBP1P12271 317 aa19.66■□□□□ 0.74
RER1-209ENST00000605895 GRPEL1Q9HAV7 217 aa19.66■□□□□ 0.74
RER1-209ENST00000605895 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
RER1-209ENST00000605895 TBC1D32Q96NH3 1257 aa19.66■□□□□ 0.74
RER1-209ENST00000605895 ZNF521Q96K83 1311 aa19.65■□□□□ 0.74
RER1-209ENST00000605895 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.73
RER1-209ENST00000605895 ZBTB7CA1YPR0 619 aa19.64■□□□□ 0.73
RER1-209ENST00000605895 GAS2L3Q86XJ1 694 aa19.63■□□□□ 0.73
RER1-209ENST00000605895 MAPK8IP3Q9UPT6 1336 aa19.63■□□□□ 0.73
RER1-209ENST00000605895 FBLN2P98095 1184 aa19.62■□□□□ 0.73
RER1-209ENST00000605895 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
RER1-209ENST00000605895 MRE11P49959 708 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms