RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
PTPN23-206ENST00000602307 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
PTPN23-206ENST00000602307 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
PTPN23-206ENST00000602307 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
PTPN23-206ENST00000602307 CFTRP13569 1480 aa15.19■□□□□ 0.02
PTPN23-206ENST00000602307 NRDCO43847 1150 aa15.18■□□□□ 0.02
PTPN23-206ENST00000602307 MYBBP1AQ9BQG0 1328 aaKnown RBP15.18■□□□□ 0.02
PTPN23-206ENST00000602307 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
PTPN23-206ENST00000602307 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
PTPN23-206ENST00000602307 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
PTPN23-206ENST00000602307 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
PTPN23-206ENST00000602307 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 AMPHP49418 695 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 KIF15Q9NS87 1388 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
PTPN23-206ENST00000602307 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
PTPN23-206ENST00000602307 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
PTPN23-206ENST00000602307 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
PTPN23-206ENST00000602307 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
PTPN23-206ENST00000602307 ARAP1Q96P48 1450 aa15.15■□□□□ 0.02
PTPN23-206ENST00000602307 CUX1P39880 1505 aa15.15■□□□□ 0.02
PTPN23-206ENST00000602307 HMMRO75330 724 aa15.13■□□□□ 0.01
PTPN23-206ENST00000602307 EXOC6Q8TAG9 804 aa15.13■□□□□ 0.01
PTPN23-206ENST00000602307 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
PTPN23-206ENST00000602307 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
PTPN23-206ENST00000602307 GORABQ5T7V8 394 aa15.13■□□□□ 0.01
PTPN23-206ENST00000602307 USP47Q96K76 1375 aa15.12■□□□□ 0.01
PTPN23-206ENST00000602307 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
PTPN23-206ENST00000602307 APAF1O14727 1248 aa15.11■□□□□ 0.01
PTPN23-206ENST00000602307 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-206ENST00000602307 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
PTPN23-206ENST00000602307 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
PTPN23-206ENST00000602307 SLC4A3P48751 1232 aa15.11■□□□□ 0.01
PTPN23-206ENST00000602307 ZNF644Q9H582 1327 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-206ENST00000602307 PTPRGP23470 1445 aa15.11■□□□□ 0.01
PTPN23-206ENST00000602307 LMOD3Q0VAK6 560 aa15.1■□□□□ 0.01
PTPN23-206ENST00000602307 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
PTPN23-206ENST00000602307 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
PTPN23-206ENST00000602307 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
PTPN23-206ENST00000602307 LRRC9Q6ZRR7 1453 aa15.09■□□□□ 0.01
PTPN23-206ENST00000602307 ZBED9Q6R2W3 1325 aa15.08■□□□□ 0.01
PTPN23-206ENST00000602307 TAF7LQ5H9L4 462 aa15.08■□□□□ 0.01
PTPN23-206ENST00000602307 CRBNQ96SW2 442 aa15.08■□□□□ 0.01
PTPN23-206ENST00000602307 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0.01
PTPN23-206ENST00000602307 PDE4AP27815 886 aa15.08■□□□□ 0
PTPN23-206ENST00000602307 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
PTPN23-206ENST00000602307 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
PTPN23-206ENST00000602307 FOXD4L5Q5VV16 416 aaPredicted RBP15.06■□□□□ 0
PTPN23-206ENST00000602307 FOXD4L4Q8WXT5 416 aaPredicted RBP15.06■□□□□ 0
PTPN23-206ENST00000602307 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
PTPN23-206ENST00000602307 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
PTPN23-206ENST00000602307 GPATCH3Q96I76 525 aa15.06■□□□□ 0
PTPN23-206ENST00000602307 ANKRD45Q5TZF3 282 aa15.05■□□□□ 0
PTPN23-206ENST00000602307 E9PSI1 815 aa15.05■□□□□ 0
PTPN23-206ENST00000602307 COG3Q96JB2 828 aa15.05■□□□□ -0
PTPN23-206ENST00000602307 EVC2Q86UK5 1308 aa15.05■□□□□ -0
PTPN23-206ENST00000602307 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
PTPN23-206ENST00000602307 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
PTPN23-206ENST00000602307 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
PTPN23-206ENST00000602307 GOLGA6L3A6NEY3 463 aa15.04■□□□□ -0
PTPN23-206ENST00000602307 ZKSCAN2Q63HK3 967 aa15.04■□□□□ -0
PTPN23-206ENST00000602307 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
PTPN23-206ENST00000602307 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
PTPN23-206ENST00000602307 CLSTN1O94985 981 aa15.04■□□□□ -0
PTPN23-206ENST00000602307 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
PTPN23-206ENST00000602307 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
PTPN23-206ENST00000602307 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
PTPN23-206ENST00000602307 ARID3AQ99856 593 aa15.03■□□□□ -0
PTPN23-206ENST00000602307 PTMSP20962 102 aa15.02■□□□□ -0
PTPN23-206ENST00000602307 FGD6Q6ZV73 1430 aa15.02■□□□□ -0
PTPN23-206ENST00000602307 NESP48681 1621 aa15.02■□□□□ -0
PTPN23-206ENST00000602307 RILPL2Q969X0 211 aa15.02□□□□□ -0.01
PTPN23-206ENST00000602307 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
PTPN23-206ENST00000602307 CASKIN1Q8WXD9 1431 aa15.01□□□□□ -0.01
PTPN23-206ENST00000602307 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
PTPN23-206ENST00000602307 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
PTPN23-206ENST00000602307 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
PTPN23-206ENST00000602307 ST18O60284 1047 aa14.99□□□□□ -0.01
PTPN23-206ENST00000602307 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
PTPN23-206ENST00000602307 UACAQ9BZF9 1416 aa14.99□□□□□ -0.01
PTPN23-206ENST00000602307 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
PTPN23-206ENST00000602307 TOMM22Q9NS69 142 aa14.99□□□□□ -0.01
PTPN23-206ENST00000602307 FOXD4L6Q3SYB3 417 aaPredicted RBP14.98□□□□□ -0.01
PTPN23-206ENST00000602307 FOXD4L3Q6VB84 417 aaPredicted RBP14.98□□□□□ -0.01
PTPN23-206ENST00000602307 EIF2S2P20042 333 aaKnown RBP14.97□□□□□ -0.01
PTPN23-206ENST00000602307 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 MYOM3Q5VTT5 1437 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
PTPN23-206ENST00000602307 RIPK4P57078 832 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 FYCO1Q9BQS8 1478 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 TEFQ10587 303 aa14.97□□□□□ -0.01
PTPN23-206ENST00000602307 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
PTPN23-206ENST00000602307 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.015e-7■■■■■ 29
PTPN23-206ENST00000602307 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.01
PTPN23-206ENST00000602307 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
PTPN23-206ENST00000602307 FRAT2O75474 233 aaPredicted RBP14.95□□□□□ -0.02
PTPN23-206ENST00000602307 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms