RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 BCANQ96GW7 911 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 ABCC1P33527 1531 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 NEO1Q92859 1461 aa23.26■■□□□ 1.31
LTBP4-229ENST00000601032 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
LTBP4-229ENST00000601032 PKD2Q13563 968 aa23.25■■□□□ 1.31
LTBP4-229ENST00000601032 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
LTBP4-229ENST00000601032 CFAP74Q9C0B2 1584 aa23.24■■□□□ 1.31
LTBP4-229ENST00000601032 SCAPERQ9BY12 1400 aa23.22■■□□□ 1.31
LTBP4-229ENST00000601032 HSPA5P11021 654 aaKnown RBP23.21■■□□□ 1.31
LTBP4-229ENST00000601032 NUP155O75694 1391 aa23.21■■□□□ 1.31
LTBP4-229ENST00000601032 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
LTBP4-229ENST00000601032 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
LTBP4-229ENST00000601032 RAPGEF3O95398 923 aa23.19■■□□□ 1.3
LTBP4-229ENST00000601032 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
LTBP4-229ENST00000601032 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
LTBP4-229ENST00000601032 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
LTBP4-229ENST00000601032 MAST1Q9Y2H9 1570 aa23.16■■□□□ 1.3
LTBP4-229ENST00000601032 POGZQ7Z3K3 1410 aa23.14■■□□□ 1.29
LTBP4-229ENST00000601032 FRMPD1Q5SYB0 1578 aa23.13■■□□□ 1.29
LTBP4-229ENST00000601032 RICTORQ6R327 1708 aa23.12■■□□□ 1.29
LTBP4-229ENST00000601032 WASHC2AQ641Q2 1341 aa23.11■■□□□ 1.29
LTBP4-229ENST00000601032 RSPH4AQ5TD94 716 aa23.11■■□□□ 1.29
LTBP4-229ENST00000601032 C11orf95C9JLR9 678 aaPredicted RBP23.09■■□□□ 1.29
LTBP4-229ENST00000601032 ZNF518AQ6AHZ1 1483 aa23.09■■□□□ 1.29
LTBP4-229ENST00000601032 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
LTBP4-229ENST00000601032 FAM135AQ9P2D6 1515 aa23.07■■□□□ 1.28
LTBP4-229ENST00000601032 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
LTBP4-229ENST00000601032 KDM5CP41229 1560 aa23.06■■□□□ 1.28
LTBP4-229ENST00000601032 UNC13BO14795 1591 aa23.04■■□□□ 1.28
LTBP4-229ENST00000601032 SPAG9O60271 1321 aaKnown RBP23.03■■□□□ 1.28
LTBP4-229ENST00000601032 SPATA31E1Q6ZUB1 1445 aa23.02■■□□□ 1.28
LTBP4-229ENST00000601032 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
LTBP4-229ENST00000601032 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
LTBP4-229ENST00000601032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.27
LTBP4-229ENST00000601032 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.01■■□□□ 1.27
LTBP4-229ENST00000601032 INO80Q9ULG1 1556 aaPredicted RBP23■■□□□ 1.27
LTBP4-229ENST00000601032 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
LTBP4-229ENST00000601032 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
LTBP4-229ENST00000601032 NOP58Q9Y2X3 529 aaKnown RBP22.99■■□□□ 1.27
LTBP4-229ENST00000601032 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
LTBP4-229ENST00000601032 ANP32CO43423 234 aa22.99■■□□□ 1.27
LTBP4-229ENST00000601032 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
LTBP4-229ENST00000601032 IL27Q8NEV9 243 aa22.98■■□□□ 1.27
LTBP4-229ENST00000601032 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
LTBP4-229ENST00000601032 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
LTBP4-229ENST00000601032 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
LTBP4-229ENST00000601032 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
LTBP4-229ENST00000601032 CCDC7Q96M83 1385 aa22.96■■□□□ 1.27
LTBP4-229ENST00000601032 IQGAP3Q86VI3 1631 aa22.95■■□□□ 1.26
LTBP4-229ENST00000601032 RTEL1-TNFRSF6BF6WH68 1400 aa22.95■■□□□ 1.26
LTBP4-229ENST00000601032 ABCA6Q8N139 1617 aa22.94■■□□□ 1.26
LTBP4-229ENST00000601032 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
LTBP4-229ENST00000601032 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
LTBP4-229ENST00000601032 PODXL2Q9NZ53 605 aa22.93■■□□□ 1.26
LTBP4-229ENST00000601032 UHRF1BP1Q6BDS2 1440 aa22.92■■□□□ 1.26
LTBP4-229ENST00000601032 MAGI2Q86UL8 1455 aa22.92■■□□□ 1.26
LTBP4-229ENST00000601032 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
LTBP4-229ENST00000601032 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
LTBP4-229ENST00000601032 DIP2CQ9Y2E4 1556 aa22.91■■□□□ 1.26
LTBP4-229ENST00000601032 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
LTBP4-229ENST00000601032 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
LTBP4-229ENST00000601032 CNTLNQ9NXG0 1405 aa22.89■■□□□ 1.26
LTBP4-229ENST00000601032 GLIPR1L2Q4G1C9 344 aa22.89■■□□□ 1.26
LTBP4-229ENST00000601032 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-229ENST00000601032 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
LTBP4-229ENST00000601032 USP47Q96K76 1375 aa22.87■■□□□ 1.25
LTBP4-229ENST00000601032 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
LTBP4-229ENST00000601032 ARHGEF40Q8TER5 1519 aa22.87■■□□□ 1.25
LTBP4-229ENST00000601032 SIGLEC1Q9BZZ2 1709 aa22.85■■□□□ 1.25
LTBP4-229ENST00000601032 CCDC144AA2RUR9 1427 aa22.84■■□□□ 1.25
LTBP4-229ENST00000601032 A2MP01023 1474 aa22.82■■□□□ 1.24
LTBP4-229ENST00000601032 NBR1Q14596 966 aa22.82■■□□□ 1.24
LTBP4-229ENST00000601032 ATP10AO60312 1499 aa22.82■■□□□ 1.24
LTBP4-229ENST00000601032 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
LTBP4-229ENST00000601032 DHX29Q7Z478 1369 aaKnown RBP22.8■■□□□ 1.24
LTBP4-229ENST00000601032 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
LTBP4-229ENST00000601032 RSPH6AQ9H0K4 717 aa22.79■■□□□ 1.24
LTBP4-229ENST00000601032 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
LTBP4-229ENST00000601032 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
LTBP4-229ENST00000601032 E9PCH4 1651 aa22.78■■□□□ 1.24
LTBP4-229ENST00000601032 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
LTBP4-229ENST00000601032 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.23
LTBP4-229ENST00000601032 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
LTBP4-229ENST00000601032 TRPM1Q7Z4N2 1603 aa22.75■■□□□ 1.23
LTBP4-229ENST00000601032 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
LTBP4-229ENST00000601032 KIF3BO15066 747 aa22.74■■□□□ 1.23
LTBP4-229ENST00000601032 USP35Q9P2H5 1018 aa22.74■■□□□ 1.23
LTBP4-229ENST00000601032 REREQ9P2R6 1566 aa22.73■■□□□ 1.23
LTBP4-229ENST00000601032 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
LTBP4-229ENST00000601032 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
LTBP4-229ENST00000601032 PRKRIP1Q9H875 184 aaPredicted RBP22.72■■□□□ 1.23
LTBP4-229ENST00000601032 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
LTBP4-229ENST00000601032 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
LTBP4-229ENST00000601032 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
LTBP4-229ENST00000601032 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms