RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RNF17Q9BXT8 1623 aaKnown RBP34.14■■■■□ 3.06
IRF3-227ENST00000600911 PZPP20742 1482 aa34.1■■■■□ 3.05
IRF3-227ENST00000600911 AGLP35573 1532 aa34.09■■■■□ 3.05
IRF3-227ENST00000600911 TRIM52Q96A61 297 aa34.09■■■■□ 3.05
IRF3-227ENST00000600911 DHX57Q6P158 1386 aaKnown RBP34.09■■■■□ 3.05
IRF3-227ENST00000600911 KDM5DQ9BY66 1539 aa34.09■■■■□ 3.05
IRF3-227ENST00000600911 PRDM15P57071 1507 aaPredicted RBP34.07■■■■□ 3.04
IRF3-227ENST00000600911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.07■■■■□ 3.045e-6■■■□□ 18.6
IRF3-227ENST00000600911 IQGAP3Q86VI3 1631 aa34.05■■■■□ 3.04
IRF3-227ENST00000600911 VWDEQ8N2E2 1590 aa34.04■■■■□ 3.04
IRF3-227ENST00000600911 NUP155O75694 1391 aa34.04■■■■□ 3.04
IRF3-227ENST00000600911 CEP152O94986 1710 aa34.02■■■■□ 3.04
IRF3-227ENST00000600911 FAM135AQ9P2D6 1515 aa34.01■■■■□ 3.04
IRF3-227ENST00000600911 GGT6Q6P531 493 aa34.01■■■■□ 3.03
IRF3-227ENST00000600911 MPHOSPH9Q99550 1183 aa33.95■■■■□ 3.03
IRF3-227ENST00000600911 MLECQ14165 292 aa33.93■■■■□ 3.02
IRF3-227ENST00000600911 FOXD1Q16676 465 aa33.91■■■■□ 3.02
IRF3-227ENST00000600911 ABCC3O15438 1527 aa33.91■■■■□ 3.02
IRF3-227ENST00000600911 ARID4BQ4LE39 1312 aaPredicted RBP33.91■■■■□ 3.02
IRF3-227ENST00000600911 SLC4A1APQ9BWU0 796 aaKnown RBP33.9■■■■□ 3.02
IRF3-227ENST00000600911 E9PCH4 1651 aa33.88■■■■□ 3.01
IRF3-227ENST00000600911 TET3O43151 1660 aa33.88■■■■□ 3.01
IRF3-227ENST00000600911 CLTCQ00610 1675 aaKnown RBP33.86■■■■□ 3.01
IRF3-227ENST00000600911 LMTK2Q8IWU2 1503 aa33.86■■■■□ 3.01
IRF3-227ENST00000600911 CCER1Q8TC90 406 aaPredicted RBP33.85■■■■□ 3.01
IRF3-227ENST00000600911 CAMSAP1Q5T5Y3 1602 aa33.85■■■■□ 3.01
IRF3-227ENST00000600911 ZC3H13Q5T200 1668 aaKnown RBP33.85■■■■□ 3.01
IRF3-227ENST00000600911 KANK1Q14678 1352 aa33.85■■■■□ 3.01
IRF3-227ENST00000600911 PKD2Q13563 968 aa33.83■■■■□ 3.01
IRF3-227ENST00000600911 ACIN1Q9UKV3 1341 aaKnown RBP33.82■■■■□ 3.01
IRF3-227ENST00000600911 EFCAB6Q5THR3 1501 aa33.82■■■■□ 3
IRF3-227ENST00000600911 WASHC2CQ9Y4E1 1318 aa33.79■■■■□ 3
IRF3-227ENST00000600911 CFAP65Q6ZU64 1925 aaKnown RBP33.78■■■■□ 3
IRF3-227ENST00000600911 FER1L4A9Z1Z3 1794 aa33.76■■■□□ 2.99
IRF3-227ENST00000600911 NPATQ14207 1427 aa33.73■■■□□ 2.99
IRF3-227ENST00000600911 ADAMTSL3P82987 1691 aa33.72■■■□□ 2.99
IRF3-227ENST00000600911 MADDQ8WXG6 1647 aa33.72■■■□□ 2.99
IRF3-227ENST00000600911 PLA2R1Q13018 1463 aa33.71■■■□□ 2.99
IRF3-227ENST00000600911 ANKRD30BQ9BXX2 1392 aa33.7■■■□□ 2.99
IRF3-227ENST00000600911 SPHKAPQ2M3C7 1700 aa33.68■■■□□ 2.98
IRF3-227ENST00000600911 PPP6R1Q9UPN7 881 aa33.68■■■□□ 2.98
IRF3-227ENST00000600911 SIN3AQ96ST3 1273 aa33.66■■■□□ 2.98
IRF3-227ENST00000600911 RIMS1Q86UR5 1692 aaKnown RBP33.65■■■□□ 2.98
IRF3-227ENST00000600911 MROH2AA6NES4 1674 aa33.64■■■□□ 2.98
IRF3-227ENST00000600911 ARHGAP31Q2M1Z3 1444 aa33.63■■■□□ 2.97
IRF3-227ENST00000600911 PREX1Q8TCU6 1659 aa33.63■■■□□ 2.97
IRF3-227ENST00000600911 C3P01024 1663 aa33.61■■■□□ 2.97
IRF3-227ENST00000600911 RPRD2Q5VT52 1461 aaKnown RBP33.6■■■□□ 2.97
IRF3-227ENST00000600911 PTPRTO14522 1441 aa33.6■■■□□ 2.97
IRF3-227ENST00000600911 UGGT1Q9NYU2 1555 aa33.59■■■□□ 2.97
IRF3-227ENST00000600911 ZMYM3Q14202 1370 aa33.59■■■□□ 2.97
IRF3-227ENST00000600911 FBXO31Q5XUX0 539 aaPredicted RBP33.58■■■□□ 2.97
IRF3-227ENST00000600911 SYNMO15061 1565 aa33.58■■■□□ 2.97
IRF3-227ENST00000600911 TRPM2O94759 1503 aa33.57■■■□□ 2.97
IRF3-227ENST00000600911 CNTLNQ9NXG0 1405 aa33.56■■■□□ 2.96
IRF3-227ENST00000600911 CLTCL1P53675 1640 aa33.56■■■□□ 2.96
IRF3-227ENST00000600911 CLSPNQ9HAW4 1339 aa33.56■■■□□ 2.96
IRF3-227ENST00000600911 NOS1P29475 1434 aa33.55■■■□□ 2.96
IRF3-227ENST00000600911 ESF1Q9H501 851 aaKnown RBP33.54■■■□□ 2.96
IRF3-227ENST00000600911 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
IRF3-227ENST00000600911 ERVK-7P63135 1459 aa33.53■■■□□ 2.96
IRF3-227ENST00000600911 NEUROD1Q13562 356 aa33.52■■■□□ 2.96
IRF3-227ENST00000600911 SPATA31D1Q6ZQQ2 1576 aa33.5■■■□□ 2.95
IRF3-227ENST00000600911 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
IRF3-227ENST00000600911 PLPPR3Q6T4P5 718 aa33.46■■■□□ 2.95
IRF3-227ENST00000600911 CCDC144AA2RUR9 1427 aa33.44■■■□□ 2.94
IRF3-227ENST00000600911 KDM4FA0A1W2PPD8 638 aa33.41■■■□□ 2.94
IRF3-227ENST00000600911 PTPRMP28827 1452 aa33.38■■■□□ 2.93
IRF3-227ENST00000600911 KIF1BO60333 1816 aa33.37■■■□□ 2.93
IRF3-227ENST00000600911 MYO5BQ9ULV0 1848 aa33.37■■■□□ 2.93
IRF3-227ENST00000600911 IDI1Q13907 227 aa33.33■■■□□ 2.93
IRF3-227ENST00000600911 SPATA31E1Q6ZUB1 1445 aa33.33■■■□□ 2.93
IRF3-227ENST00000600911 TNRQ92752 1358 aa33.32■■■□□ 2.92
IRF3-227ENST00000600911 ADGRB3O60242 1522 aa33.29■■■□□ 2.92
IRF3-227ENST00000600911 TMEM131LA2VDJ0 1609 aa33.27■■■□□ 2.92
IRF3-227ENST00000600911 MYO3AQ8NEV4 1616 aa33.26■■■□□ 2.92
IRF3-227ENST00000600911 L3MBTL2Q969R5 705 aa33.24■■■□□ 2.91
IRF3-227ENST00000600911 TONSLQ96HA7 1378 aa33.24■■■□□ 2.91
IRF3-227ENST00000600911 RGL3Q3MIN7 710 aa33.24■■■□□ 2.91
IRF3-227ENST00000600911 SLC52A1Q9NWF4 448 aa33.24■■■□□ 2.91
IRF3-227ENST00000600911 UBR1Q8IWV7 1749 aa33.21■■■□□ 2.91
IRF3-227ENST00000600911 NEURL4Q96JN8 1562 aa33.21■■■□□ 2.91
IRF3-227ENST00000600911 CHGAP10645 457 aaKnown RBP33.2■■■□□ 2.91
IRF3-227ENST00000600911 IFT172Q9UG01 1749 aa33.2■■■□□ 2.9
IRF3-227ENST00000600911 A2ML1A8K2U0 1454 aa33.16■■■□□ 2.9
IRF3-227ENST00000600911 NLRP1Q9C000 1473 aa33.16■■■□□ 2.9
IRF3-227ENST00000600911 SETD1BQ9UPS6 1966 aaKnown RBP33.15■■■□□ 2.9
IRF3-227ENST00000600911 PPLO60437 1756 aa33.15■■■□□ 2.9
IRF3-227ENST00000600911 CEP170BQ9Y4F5 1589 aaPredicted RBP33.12■■■□□ 2.89
IRF3-227ENST00000600911 ZNF142P52746 1687 aaPredicted RBP33.12■■■□□ 2.89
IRF3-227ENST00000600911 KDM5AP29375 1690 aaKnown RBP33.11■■■□□ 2.89
IRF3-227ENST00000600911 NEXMIFQ5QGS0 1516 aa33.11■■■□□ 2.89
IRF3-227ENST00000600911 ZEB1P37275 1124 aaPredicted RBP33.1■■■□□ 2.89
IRF3-227ENST00000600911 TIMELESSQ9UNS1 1208 aa33.1■■■□□ 2.89
IRF3-227ENST00000600911 DCAF11Q8TEB1 546 aa33.09■■■□□ 2.89
IRF3-227ENST00000600911 PPP1R15AO75807 674 aaPredicted RBP33.08■■■□□ 2.89
IRF3-227ENST00000600911 KDM2AQ9Y2K7 1162 aa33.07■■■□□ 2.88
IRF3-227ENST00000600911 ZNF326Q5BKZ1 582 aaKnown RBP33.06■■■□□ 2.88
IRF3-227ENST00000600911 NBPF8Q3BBV2 869 aa33.05■■■□□ 2.88
IRF3-227ENST00000600911 NUTM2DQ5VT03 806 aaPredicted RBP33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms